RNA–Protein interactions for RNA: YLR174W

IDP2, Transcript of Cytosolic NADP-specific isocitrate dehydrogenase, yeast

Gene IDP2, Length 1,239 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IDP2	YLR174W	YOR296W	Q08748	1289 aa		4.83	□□□□□ -1.64
IDP2	YLR174W	PHM7	Q12252	991 aa		4.83	□□□□□ -1.64
IDP2	YLR174W	HIR3	P47171	1648 aa		4.83	□□□□□ -1.64
IDP2	YLR174W	TAF2	P23255	1407 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	BUD4	P47136	1447 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
IDP2	YLR174W	MRPL16	P38064	232 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	BSD2	P38356	321 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	CEM1	P39525	442 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	NSG2	P53898	299 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	CDC55	Q00362	526 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	RSC4	Q02206	625 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	RRP15	Q06511	250 aa	Predicted RBP	4.82	□□□□□ -1.64
IDP2	YLR174W	STB3	Q12427	513 aa		4.82	□□□□□ -1.64
IDP2	YLR174W	SRB8	P25648	1427 aa		4.81	□□□□□ -1.64
IDP2	YLR174W	QCR6	P00127	147 aa		4.81	□□□□□ -1.64
IDP2	YLR174W	ATE1	P16639	503 aa		4.81	□□□□□ -1.64
IDP2	YLR174W	DIT1	P21623	536 aa		4.81	□□□□□ -1.64
IDP2	YLR174W	IRS4	P36115	615 aa	Known RBP	4.81	□□□□□ -1.64
IDP2	YLR174W	KRE33	P53914	1056 aa	Known RBP	4.81	□□□□□ -1.64
IDP2	YLR174W	ADE12	P80210	433 aa	Known RBP	4.81	□□□□□ -1.64
IDP2	YLR174W	TIF6	Q12522	245 aa	Known RBP	4.81	□□□□□ -1.64
IDP2	YLR174W	SSM4	P40318	1319 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	PHO4	P07270	312 aa	Known RBP	4.8	□□□□□ -1.64
IDP2	YLR174W	IME2	P32581	645 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	APM2	P38700	605 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	PSY2	P40164	858 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	YFL066C	P43538	392 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	SNU71	P53207	620 aa	Known RBP	4.8	□□□□□ -1.64
IDP2	YLR174W	THI72	Q08579	599 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	MYO4	P32492	1471 aa		4.8	□□□□□ -1.64
IDP2	YLR174W	ESP1	Q03018	1630 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	BPT1	P14772	1559 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	RPP1A	P05318	106 aa	Predicted RBP	4.79	□□□□□ -1.64
IDP2	YLR174W	PAM1	P37304	830 aa	Known RBP	4.79	□□□□□ -1.64
IDP2	YLR174W	MGE1	P38523	228 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	SAM37	P50110	327 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	ITC1	P53125	1264 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	YNR040W	P53736	256 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	SCC2	Q04002	1493 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	TOP2	P06786	1428 aa	Known RBP	4.79	□□□□□ -1.64
IDP2	YLR174W	YLR419W	Q06698	1435 aa	Known RBP	4.79	□□□□□ -1.64
IDP2	YLR174W	SMC4	Q12267	1418 aa		4.79	□□□□□ -1.64
IDP2	YLR174W	IRC20	Q06554	1556 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	SWR1	Q05471	1514 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	PAN1	P32521	1480 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	GCD6	P32501	712 aa	Known RBP	4.78	□□□□□ -1.64
IDP2	YLR174W	NCL1	P38205	684 aa	Known RBP	4.78	□□□□□ -1.64
IDP2	YLR174W	AIM46	P38885	310 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	EAF7	P53911	425 aa	Known RBP	4.78	□□□□□ -1.64
IDP2	YLR174W	BSC2	Q05611	235 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	EMG1	Q06287	252 aa	Known RBP	4.78	□□□□□ -1.64
IDP2	YLR174W	SYT1	Q06836	1226 aa		4.78	□□□□□ -1.64
IDP2	YLR174W	VPS35	P34110	944 aa		4.77	□□□□□ -1.65
IDP2	YLR174W	YIL165C	P40446	119 aa		4.77	□□□□□ -1.65
IDP2	YLR174W	DAK2	P43550	591 aa		4.77	□□□□□ -1.65
IDP2	YLR174W	YJR107W	P47145	328 aa		4.77	□□□□□ -1.65
IDP2	YLR174W	NOC3	Q07896	663 aa	Predicted RBP	4.77	□□□□□ -1.65
IDP2	YLR174W	AI1	P03875	834 aa		4.76	□□□□□ -1.65
IDP2	YLR174W	RPT1	P33299	467 aa	Known RBP	4.76	□□□□□ -1.65
IDP2	YLR174W	CIC1	P38779	376 aa	Known RBP	4.76	□□□□□ -1.65
IDP2	YLR174W	RPS0B	P46654	252 aa	Known RBP	4.76	□□□□□ -1.65
IDP2	YLR174W	SEC8	P32855	1065 aa		4.75	□□□□□ -1.65
IDP2	YLR174W	YER156C	P40093	338 aa	Known RBP	4.75	□□□□□ -1.65
IDP2	YLR174W	CCT8	P47079	568 aa	Known RBP	4.75	□□□□□ -1.65
IDP2	YLR174W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
IDP2	YLR174W	ORC1	P54784	914 aa	Predicted RBP	4.75	□□□□□ -1.65
IDP2	YLR174W	HEH2	Q03281	663 aa		4.75	□□□□□ -1.65
IDP2	YLR174W	OYE2	Q03558	400 aa	Known RBP	4.75	□□□□□ -1.65
IDP2	YLR174W	AIM44	Q99299	758 aa		4.75	□□□□□ -1.65
IDP2	YLR174W	FLP1	P03870	423 aa		4.74	□□□□□ -1.65
IDP2	YLR174W	FPS1	P23900	669 aa		4.74	□□□□□ -1.65
IDP2	YLR174W	MSC7	P38694	644 aa		4.74	□□□□□ -1.65
IDP2	YLR174W	YHL008C	P38750	627 aa		4.74	□□□□□ -1.65
IDP2	YLR174W	YFR016C	P43597	1233 aa	Known RBP	4.74	□□□□□ -1.65
IDP2	YLR174W	NOP7	P53261	605 aa	Known RBP	4.74	□□□□□ -1.65
IDP2	YLR174W	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
IDP2	YLR174W	YDR461C-A	Q2V2P7	80 aa		4.74	□□□□□ -1.65
IDP2	YLR174W	CFT1	Q06632	1357 aa	Known RBP	4.74	□□□□□ -1.65
IDP2	YLR174W	IDI1	P15496	288 aa		4.73	□□□□□ -1.65
IDP2	YLR174W	SBE2	P42223	864 aa	Known RBP	4.73	□□□□□ -1.65
IDP2	YLR174W	CTR9	P89105	1077 aa		4.73	□□□□□ -1.65
IDP2	YLR174W	RSC2	Q06488	889 aa		4.73	□□□□□ -1.65
IDP2	YLR174W	OXR1	Q08952	273 aa		4.73	□□□□□ -1.65
IDP2	YLR174W	PYC2	P32327	1180 aa	Known RBP	4.72	□□□□□ -1.65
IDP2	YLR174W	MET1	P36150	593 aa		4.72	□□□□□ -1.65
IDP2	YLR174W	ECM2	P38241	364 aa	Known RBP	4.72	□□□□□ -1.65
IDP2	YLR174W	OPY1	P38271	328 aa		4.72	□□□□□ -1.65
IDP2	YLR174W	PPT1	P53043	513 aa		4.72	□□□□□ -1.65
IDP2	YLR174W	TY1A-DR2	Q03964	440 aa	Known RBP	4.72	□□□□□ -1.65
IDP2	YLR174W	YOR1	P53049	1477 aa		4.72	□□□□□ -1.65
IDP2	YLR174W	DNA2	P38859	1522 aa		4.72	□□□□□ -1.65
IDP2	YLR174W	YCF1	P39109	1515 aa	Known RBP	4.72	□□□□□ -1.65
IDP2	YLR174W	YPK9	Q12697	1472 aa		4.71	□□□□□ -1.66
IDP2	YLR174W	COB	P00163	385 aa		4.71	□□□□□ -1.66
IDP2	YLR174W	MCM2	P29469	868 aa		4.71	□□□□□ -1.66
IDP2	YLR174W	SNF7	P39929	240 aa	Known RBP	4.71	□□□□□ -1.66
IDP2	YLR174W	FYV10	P40492	516 aa		4.71	□□□□□ -1.66
IDP2	YLR174W	PRK1	P40494	810 aa		4.71	□□□□□ -1.66
IDP2	YLR174W	YCS4	Q06156	1176 aa		4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms