RNA–Protein interactions for RNA: YLR133W

CKI1, Transcript of Choline kinase, yeastyeast

Gene CKI1, Length 1,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKI1YLR133W APL6P46682 809 aa8.73□□□□□ -1.01
CKI1YLR133W HXT13P39924 564 aa8.72□□□□□ -1.01
CKI1YLR133W RRT6P53117 311 aaPredicted RBP8.72□□□□□ -1.01
CKI1YLR133W DUS1P53759 423 aaKnown RBP8.72□□□□□ -1.01
CKI1YLR133W HXT17P53631 564 aa8.71□□□□□ -1.01
CKI1YLR133W LSP1Q12230 341 aaKnown RBP8.71□□□□□ -1.01
CKI1YLR133W CSR2Q12734 1121 aa8.71□□□□□ -1.01
CKI1YLR133W CYB2P00175 591 aa8.71□□□□□ -1.02
CKI1YLR133W NOT3P06102 836 aaKnown RBP8.71□□□□□ -1.02
CKI1YLR133W MDL2P33311 773 aa8.71□□□□□ -1.02
CKI1YLR133W MLC1P53141 149 aa8.71□□□□□ -1.02
CKI1YLR133W AAD16Q02895 342 aa8.71□□□□□ -1.02
CKI1YLR133W VAS1P07806 1104 aaKnown RBP8.7□□□□□ -1.02
CKI1YLR133W HVG1P0CE11 249 aa8.7□□□□□ -1.02
CKI1YLR133W GAL2P13181 574 aa8.7□□□□□ -1.02
CKI1YLR133W PCS60P38137 543 aaKnown RBP RIP-Chip data8.7□□□□□ -1.02not detected
CKI1YLR133W BSD2P38356 321 aa8.7□□□□□ -1.02
CKI1YLR133W ALO1P54783 526 aaKnown RBP8.7□□□□□ -1.02
CKI1YLR133W CDC16P09798 840 aa8.69□□□□□ -1.02
CKI1YLR133W BOI1P38041 980 aaKnown RBP8.69□□□□□ -1.02
CKI1YLR133W GRX7P38068 203 aa8.69□□□□□ -1.02
CKI1YLR133W RMD1Q03441 430 aa8.69□□□□□ -1.02
CKI1YLR133W NHA1Q99271 985 aa8.69□□□□□ -1.02
CKI1YLR133W ARL1P38116 183 aaKnown RBP8.68□□□□□ -1.02
CKI1YLR133W ECM21P38167 1117 aaKnown RBP8.68□□□□□ -1.02
CKI1YLR133W YGL081WP53156 320 aa8.68□□□□□ -1.02
CKI1YLR133W PDR18P53756 1333 aa8.68□□□□□ -1.02
CKI1YLR133W RAD53P22216 821 aa8.68□□□□□ -1.02
CKI1YLR133W SPT16P32558 1035 aaKnown RBP8.68□□□□□ -1.02
CKI1YLR133W KEL1P38853 1164 aaKnown RBP8.68□□□□□ -1.02
CKI1YLR133W NSG2P53898 299 aa8.68□□□□□ -1.02
CKI1YLR133W TLG1Q03322 224 aa8.68□□□□□ -1.02
CKI1YLR133W TIF6Q12522 245 aaKnown RBP8.68□□□□□ -1.02
CKI1YLR133W NPL4P33755 580 aa8.67□□□□□ -1.02
CKI1YLR133W ADP1P25371 1049 aa8.66□□□□□ -1.02
CKI1YLR133W GEF1P37020 779 aa8.66□□□□□ -1.02
CKI1YLR133W EPS1P40557 701 aa8.66□□□□□ -1.02
CKI1YLR133W NPA3P47122 385 aa8.66□□□□□ -1.02
CKI1YLR133W PIP2P52960 996 aa8.66□□□□□ -1.02
CKI1YLR133W PCL8Q08966 492 aa8.66□□□□□ -1.02
CKI1YLR133W ASF1P32447 279 aa8.66□□□□□ -1.02
CKI1YLR133W TPS3P38426 1054 aaKnown RBP8.66□□□□□ -1.02
CKI1YLR133W CST9Q06032 482 aa8.66□□□□□ -1.02
CKI1YLR133W GSC2P40989 1895 aa8.65□□□□□ -1.02
CKI1YLR133W PMA1P05030 918 aaKnown RBP8.65□□□□□ -1.03
CKI1YLR133W SWE1P32944 819 aa8.65□□□□□ -1.03
CKI1YLR133W YGR130CP53278 816 aa8.65□□□□□ -1.03
CKI1YLR133W VPS20Q04272 221 aa8.65□□□□□ -1.03
CKI1YLR133W SRF1Q12516 437 aa8.65□□□□□ -1.03
CKI1YLR133W RNR2P09938 399 aaKnown RBP8.64□□□□□ -1.03
CKI1YLR133W PFK2P16862 959 aaKnown RBP RIP-Chip data8.64□□□□□ -1.03not detected
CKI1YLR133W PIB2P53191 635 aa8.64□□□□□ -1.03
CKI1YLR133W FLO1P32768 1537 aa8.64□□□□□ -1.03
CKI1YLR133W PBY1P38254 753 aa8.63□□□□□ -1.03
CKI1YLR133W MSH4P40965 878 aaPredicted RBP8.63□□□□□ -1.03
CKI1YLR133W IOC3P43596 787 aa8.63□□□□□ -1.03
CKI1YLR133W PIL1P53252 339 aaKnown RBP8.63□□□□□ -1.03
CKI1YLR133W PPM2Q08282 695 aa8.63□□□□□ -1.03
CKI1YLR133W KNS1P32350 737 aaPredicted RBP8.63□□□□□ -1.03
CKI1YLR133W MOT2P34909 587 aaKnown RBP8.63□□□□□ -1.03
CKI1YLR133W APE3P37302 537 aaKnown RBP8.63□□□□□ -1.03
CKI1YLR133W YBL028CP38202 106 aa8.63□□□□□ -1.03
CKI1YLR133W RSC30P38781 883 aa8.63□□□□□ -1.03
CKI1YLR133W YMR147WP40218 223 aaKnown RBP8.63□□□□□ -1.03
CKI1YLR133W IRC8P47046 822 aa8.63□□□□□ -1.03
CKI1YLR133W MRPS35P53292 345 aa8.63□□□□□ -1.03
CKI1YLR133W RBA50Q04418 439 aa8.63□□□□□ -1.03
CKI1YLR133W FPR4Q06205 392 aaPredicted RBP8.63□□□□□ -1.03
CKI1YLR133W BRE1Q07457 700 aaKnown RBP8.63□□□□□ -1.03
CKI1YLR133W RNA1P11745 407 aaKnown RBP8.62□□□□□ -1.03
CKI1YLR133W KIN1P13185 1064 aa8.62□□□□□ -1.03
CKI1YLR133W COG8Q04632 607 aa8.62□□□□□ -1.03
CKI1YLR133W KAR5Q04746 504 aa8.62□□□□□ -1.03
CKI1YLR133W KEL3Q08979 651 aaPredicted RBP8.62□□□□□ -1.03
CKI1YLR133W TRL1P09880 827 aaKnown RBP8.61□□□□□ -1.03
CKI1YLR133W OSH3P38713 996 aaKnown RBP8.61□□□□□ -1.03
CKI1YLR133W PEX29Q03370 554 aa8.61□□□□□ -1.03
CKI1YLR133W KTR1P27810 393 aaKnown RBP8.6□□□□□ -1.03
CKI1YLR133W BBC1P47068 1157 aa8.6□□□□□ -1.03
CKI1YLR133W DMA2P53924 522 aa8.6□□□□□ -1.03
CKI1YLR133W PKH3Q03306 898 aaPredicted RBP8.6□□□□□ -1.03
CKI1YLR133W RIM20Q12033 661 aa8.6□□□□□ -1.03
CKI1YLR133W ENP2P48234 707 aaKnown RBP8.6□□□□□ -1.03
CKI1YLR133W HAP5Q02516 242 aa8.6□□□□□ -1.03
CKI1YLR133W YDL124WQ07551 312 aaKnown RBP8.6□□□□□ -1.03
CKI1YLR133W YPL260WQ08977 551 aa8.6□□□□□ -1.03
CKI1YLR133W TUB2P02557 457 aaKnown RBP8.59□□□□□ -1.03
CKI1YLR133W BIK1P11709 440 aa8.59□□□□□ -1.03
CKI1YLR133W ACA1P39970 489 aa8.59□□□□□ -1.03
CKI1YLR133W JIP4Q03361 876 aa8.59□□□□□ -1.03
CKI1YLR133W TAH18Q12181 623 aa8.59□□□□□ -1.03
CKI1YLR133W AAP1P37898 856 aaKnown RBP8.58□□□□□ -1.04
CKI1YLR133W BDH2P39713 417 aa8.58□□□□□ -1.04
CKI1YLR133W NCS6P53088 359 aa8.58□□□□□ -1.04
CKI1YLR133W FAP1P53971 965 aa8.58□□□□□ -1.04
CKI1YLR133W OPI1P21957 404 aa8.57□□□□□ -1.04
CKI1YLR133W ASH1P34233 588 aa8.57□□□□□ -1.04
CKI1YLR133W SPT21P35209 758 aa8.57□□□□□ -1.04
CKI1YLR133W YNL011CP53980 444 aa8.57□□□□□ -1.04
CKI1YLR133W HRQ1Q05549 1077 aa8.57□□□□□ -1.04
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms