RNA–Protein interactions for RNA: YLL013C

PUF3, Transcript of Protein of the mitochondrial outer surface, yeastyeast

Gene PUF3, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUF3YLL013C SGD1Q06132 899 aa6.85□□□□□ -1.31
PUF3YLL013C YDL124WQ07551 312 aaKnown RBP6.85□□□□□ -1.31
PUF3YLL013C TUB2P02557 457 aaKnown RBP6.84□□□□□ -1.31
PUF3YLL013C OCT1P35999 772 aa6.84□□□□□ -1.31
PUF3YLL013C SPR3P41901 512 aa6.84□□□□□ -1.31
PUF3YLL013C IRC8P47046 822 aa6.84□□□□□ -1.31
PUF3YLL013C SNU71P53207 620 aaKnown RBP6.84□□□□□ -1.31
PUF3YLL013C RMD1Q03441 430 aa6.84□□□□□ -1.31
PUF3YLL013C EPS1P40557 701 aa6.84□□□□□ -1.31
PUF3YLL013C KIN1P13185 1064 aa6.83□□□□□ -1.32
PUF3YLL013C NPL4P33755 580 aa6.83□□□□□ -1.32
PUF3YLL013C RFC1P38630 861 aaKnown RBP6.83□□□□□ -1.32
PUF3YLL013C YPL260WQ08977 551 aa6.83□□□□□ -1.32
PUF3YLL013C IOC3P43596 787 aa6.83□□□□□ -1.32
PUF3YLL013C NET1P47035 1189 aa6.82□□□□□ -1.32
PUF3YLL013C YLR225CQ05948 407 aaKnown RBP6.82□□□□□ -1.32
PUF3YLL013C MCD4P36051 919 aa6.82□□□□□ -1.32
PUF3YLL013C CST26P38226 397 aa6.82□□□□□ -1.32
PUF3YLL013C LYS14P40971 790 aa6.82□□□□□ -1.32
PUF3YLL013C MPH3P0CE00 602 aa6.81□□□□□ -1.32
PUF3YLL013C FPR3P38911 411 aaKnown RBP6.81□□□□□ -1.32
PUF3YLL013C PIB2P53191 635 aa6.81□□□□□ -1.32
PUF3YLL013C BRE1Q07457 700 aaKnown RBP6.81□□□□□ -1.32
PUF3YLL013C IXR1P33417 597 aa6.81□□□□□ -1.32
PUF3YLL013C ERG7P38604 731 aa6.81□□□□□ -1.32
PUF3YLL013C OSH3P38713 996 aaKnown RBP6.81□□□□□ -1.32
PUF3YLL013C RRP8P38961 392 aaKnown RBP6.81□□□□□ -1.32
PUF3YLL013C VAB2P40003 282 aa6.81□□□□□ -1.32
PUF3YLL013C LAP2Q10740 671 aa6.81□□□□□ -1.32
PUF3YLL013C MRPS35P53292 345 aa6.8□□□□□ -1.32
PUF3YLL013C KAR5Q04746 504 aa6.8□□□□□ -1.32
PUF3YLL013C PRE8P23639 250 aa6.8□□□□□ -1.32
PUF3YLL013C YDJ1P25491 409 aaKnown RBP6.8□□□□□ -1.32
PUF3YLL013C SLN1P39928 1220 aaPredicted RBP6.8□□□□□ -1.32
PUF3YLL013C SUB2Q07478 446 aaKnown RBP6.8□□□□□ -1.32
PUF3YLL013C CFT2Q12102 859 aaPredicted RBP6.8□□□□□ -1.32
PUF3YLL013C FBP1P09201 348 aa6.8□□□□□ -1.32
PUF3YLL013C STM1P39015 273 aaKnown RBP6.8□□□□□ -1.32
PUF3YLL013C ATG1P53104 897 aa6.8□□□□□ -1.32
PUF3YLL013C MRD1Q06106 887 aaKnown RBP6.8□□□□□ -1.32
PUF3YLL013C CDC16P09798 840 aa6.79□□□□□ -1.32
PUF3YLL013C KTR1P27810 393 aaKnown RBP6.79□□□□□ -1.32
PUF3YLL013C TAH18Q12181 623 aa6.79□□□□□ -1.32
PUF3YLL013C SRM1P21827 482 aa6.79□□□□□ -1.32
PUF3YLL013C CDC60P26637 1090 aaKnown RBP6.79□□□□□ -1.32
PUF3YLL013C PAM1P37304 830 aaKnown RBP6.79□□□□□ -1.32
PUF3YLL013C NKP2Q06162 153 aa6.79□□□□□ -1.32
PUF3YLL013C ERG12P07277 443 aa6.78□□□□□ -1.32
PUF3YLL013C RTS1P38903 757 aa6.78□□□□□ -1.32
PUF3YLL013C BBC1P47068 1157 aa6.78□□□□□ -1.32
PUF3YLL013C KRS1P15180 591 aaKnown RBP6.78□□□□□ -1.32
PUF3YLL013C VID27P40157 782 aa6.78□□□□□ -1.32
PUF3YLL013C YJL007CP47080 104 aa6.78□□□□□ -1.32
PUF3YLL013C ECM16Q04217 1267 aaKnown RBP6.78□□□□□ -1.32
PUF3YLL013C TY3A-GQ12173 290 aa6.78□□□□□ -1.32
PUF3YLL013C TY3A-IQ99219 290 aa6.78□□□□□ -1.32
PUF3YLL013C SRS2P12954 1174 aa6.77□□□□□ -1.33
PUF3YLL013C COQ1P18900 473 aa6.77□□□□□ -1.33
PUF3YLL013C PKH3Q03306 898 aaPredicted RBP6.77□□□□□ -1.33
PUF3YLL013C PIB1Q06651 286 aa6.77□□□□□ -1.33
PUF3YLL013C LAM4P38800 1345 aa6.77□□□□□ -1.33
PUF3YLL013C YHL050CP38721 697 aa6.77□□□□□ -1.33
PUF3YLL013C TIF4631P39935 952 aaKnown RBP6.77□□□□□ -1.33
PUF3YLL013C PSF2P40359 213 aa6.77□□□□□ -1.33
PUF3YLL013C RAD61Q99359 647 aa6.77□□□□□ -1.33
PUF3YLL013C OPI1P21957 404 aa6.76□□□□□ -1.33
PUF3YLL013C YML037CQ03703 340 aa6.76□□□□□ -1.33
PUF3YLL013C PER1P25625 357 aa6.76□□□□□ -1.33
PUF3YLL013C PAH1P32567 862 aa6.76□□□□□ -1.33
PUF3YLL013C MAC1P35192 417 aa6.76□□□□□ -1.33
PUF3YLL013C MET1P36150 593 aa6.76□□□□□ -1.33
PUF3YLL013C VPS8P39702 1274 aa6.76□□□□□ -1.33
PUF3YLL013C SPB4P25808 606 aaPredicted RBP6.75□□□□□ -1.33
PUF3YLL013C SKG3Q06315 1026 aa6.75□□□□□ -1.33
PUF3YLL013C UBX5Q06682 500 aa6.75□□□□□ -1.33
PUF3YLL013C UFD2P54860 961 aa6.75□□□□□ -1.33
PUF3YLL013C CHO2P05374 869 aaKnown RBP6.74□□□□□ -1.33
PUF3YLL013C VAS1P07806 1104 aaKnown RBP6.74□□□□□ -1.33
PUF3YLL013C CHS3P29465 1165 aa6.74□□□□□ -1.33
PUF3YLL013C VMA2P16140 517 aaKnown RBP6.74□□□□□ -1.33
PUF3YLL013C RPS15Q01855 142 aaKnown RBP6.74□□□□□ -1.33
PUF3YLL013C ULP1Q02724 621 aa6.74□□□□□ -1.33
PUF3YLL013C RIM20Q12033 661 aa6.74□□□□□ -1.33
PUF3YLL013C ACE2P21192 770 aa6.73□□□□□ -1.33
PUF3YLL013C EUG1P32474 517 aa6.73□□□□□ -1.33
PUF3YLL013C FPR4Q06205 392 aaPredicted RBP6.73□□□□□ -1.33
PUF3YLL013C SSF2Q12153 453 aaPredicted RBP6.73□□□□□ -1.33
PUF3YLL013C RAD50P12753 1312 aa6.73□□□□□ -1.33
PUF3YLL013C SAM2P19358 384 aaKnown RBP6.72□□□□□ -1.33
PUF3YLL013C DIT2P21595 489 aa6.72□□□□□ -1.33
PUF3YLL013C PKC1P24583 1151 aa6.72□□□□□ -1.33
PUF3YLL013C SOL4P53315 255 aa6.72□□□□□ -1.33
PUF3YLL013C RIT1P23796 513 aa6.72□□□□□ -1.33
PUF3YLL013C PRO3P32263 286 aaKnown RBP6.72□□□□□ -1.33
PUF3YLL013C GPB2P39717 880 aa6.72□□□□□ -1.33
PUF3YLL013C YAF9P53930 226 aa6.72□□□□□ -1.33
PUF3YLL013C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
PUF3YLL013C TUS1Q06412 1307 aa6.71□□□□□ -1.34
PUF3YLL013C YKR018CP36114 725 aa6.71□□□□□ -1.34
PUF3YLL013C UBP9P39967 754 aa6.71□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms