RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT1	YJR001W	SIT4	P20604	311 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	PEP7	P32609	515 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	YHR020W	P38708	688 aa	Known RBP	5.11	□□□□□ -1.59
AVT1	YJR001W	NPR3	P38742	1146 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	HSE1	P38753	452 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	RPS26A	P39938	119 aa	Known RBP	5.11	□□□□□ -1.59
AVT1	YJR001W	RPS26B	P39939	119 aa	Known RBP	5.11	□□□□□ -1.59
AVT1	YJR001W	YFR006W	P43590	535 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	ROM1	P53046	1155 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	NAF1	P53919	492 aa	Known RBP	5.11	□□□□□ -1.59
AVT1	YJR001W	RTP1	Q12751	981 aa		5.11	□□□□□ -1.59
AVT1	YJR001W	PHO87	P25360	923 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	THI4	P32318	326 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	HIR1	P32479	840 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	TFC3	P34111	1160 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	CWC24	P53769	259 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	PUN1	Q06991	263 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	PUS1	Q12211	544 aa	Known RBP	5.1	□□□□□ -1.59
AVT1	YJR001W	TMA17	Q12513	150 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	ADR1	P07248	1323 aa		5.1	□□□□□ -1.59
AVT1	YJR001W	NTE1	Q04958	1679 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	SNT2	P53127	1403 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	CIT1	P00890	479 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	YGR273C	P53329	174 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	SND1	Q04007	877 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	HEL2	Q05580	639 aa	Known RBP	5.09	□□□□□ -1.59
AVT1	YJR001W	IMH1	Q06704	911 aa	Known RBP	5.09	□□□□□ -1.59
AVT1	YJR001W	YLL054C	Q12244	843 aa		5.09	□□□□□ -1.59
AVT1	YJR001W	GEA1	P47102	1408 aa	Predicted RBP	5.09	□□□□□ -1.59
AVT1	YJR001W	RPL8A	P17076	256 aa	Known RBP	5.09	□□□□□ -1.6
AVT1	YJR001W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.09	□□□□□ -1.6	not detected
AVT1	YJR001W	PET112	P33893	541 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	YKL222C	P35995	705 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	SAP190	P36123	1033 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	PIM1	P36775	1133 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	YAP1801	P38856	637 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	YJR120W	P47157	116 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	ACS2	P52910	683 aa	Known RBP	5.09	□□□□□ -1.6
AVT1	YJR001W	ENV9	Q08651	330 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	NYV1	Q12255	253 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	HSP42	Q12329	375 aa		5.09	□□□□□ -1.6
AVT1	YJR001W	CYC8	P14922	966 aa		5.08	□□□□□ -1.6
AVT1	YJR001W	PES4	P39684	611 aa		5.08	□□□□□ -1.6
AVT1	YJR001W	AIM20	P40451	204 aa		5.08	□□□□□ -1.6
AVT1	YJR001W	TAN1	P53072	289 aa	Predicted RBP	5.08	□□□□□ -1.6
AVT1	YJR001W	TRS120	Q04183	1289 aa		5.08	□□□□□ -1.6
AVT1	YJR001W	LSO1	Q3E827	93 aa		5.08	□□□□□ -1.6
AVT1	YJR001W	RPO21	P04050	1733 aa	Known RBP	5.08	□□□□□ -1.6
AVT1	YJR001W	TIM54	P47045	478 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	HOS2	P53096	452 aa	Predicted RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	TGL2	P54857	326 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	FOX2	Q02207	900 aa	Known RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	NOP58	Q12499	511 aa	Known RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	IKI3	Q06706	1349 aa	Known RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	INH1	P01097	85 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	GAP1	P19145	602 aa	Predicted RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	ISF1	P32488	338 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	GPP1	P41277	250 aa	Known RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	VID30	P53076	958 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	NAN1	Q02931	896 aa	Known RBP	5.07	□□□□□ -1.6
AVT1	YJR001W	GRC3	Q07845	632 aa		5.07	□□□□□ -1.6
AVT1	YJR001W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.07	□□□□□ -1.6	not detected
AVT1	YJR001W	NUP170	P38181	1502 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	TY3B-G	Q99315	1547 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	ERR1	P0CX10	437 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	ERR2	P0CX11	437 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	PGI1	P12709	554 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	RSP5	P39940	809 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	SPF1	P39986	1215 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	NIT1	P40447	199 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	PRP43	P53131	767 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	YGR122W	P53272	402 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	UBX4	P54730	416 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	SXM1	Q04175	944 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	RPN7	Q06103	429 aa	Known RBP	5.06	□□□□□ -1.6
AVT1	YJR001W	YPR172W	Q06608	200 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	FLC1	Q08967	793 aa		5.06	□□□□□ -1.6
AVT1	YJR001W	GUT1	P32190	709 aa		5.05	□□□□□ -1.6
AVT1	YJR001W	LTV1	P34078	463 aa		5.05	□□□□□ -1.6
AVT1	YJR001W	JNM1	P36224	373 aa		5.05	□□□□□ -1.6
AVT1	YJR001W	TYW3	P53177	273 aa		5.05	□□□□□ -1.6
AVT1	YJR001W	SEC3	P33332	1336 aa	Known RBP	5.05	□□□□□ -1.6
AVT1	YJR001W	MSM1	P22438	575 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	MSH2	P25847	964 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	APL2	P36000	726 aa	Predicted RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	YMR124W	P39523	943 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	RSC8	P43609	557 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	BNI5	P53890	448 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	YPR109W	Q06104	294 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	TDA5	Q06417	326 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	ATG13	Q06628	738 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	VIP1	Q06685	1146 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	GEA2	P39993	1459 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	IRC20	Q06554	1556 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	SUP35	P05453	685 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	YEF3	P16521	1044 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	RPL5	P26321	297 aa	Known RBP	5.04	□□□□□ -1.6
AVT1	YJR001W	SSH4	P32343	579 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	STE5	P32917	917 aa		5.04	□□□□□ -1.6
AVT1	YJR001W	SOL3	P38858	249 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms