RNA–Protein interactions for RNA: YHR165C

PRP8, Transcript of Component of U4/U6-U5 snRNP complex, yeastyeast

Gene PRP8, Length 7,242 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP8YHR165C CDC3P32457 520 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C MUM2P38236 366 aa3.07□□□□□ -1.92
PRP8YHR165C DAS1P47005 663 aa3.07□□□□□ -1.92
PRP8YHR165C HEH2Q03281 663 aa3.07□□□□□ -1.92
PRP8YHR165C LAG2Q92325 660 aa3.07□□□□□ -1.92
PRP8YHR165C LYS2P07702 1392 aa3.07□□□□□ -1.92
PRP8YHR165C DED81P38707 554 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C NPL3Q01560 414 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
PRP8YHR165C APC11Q12157 165 aa3.07□□□□□ -1.92
PRP8YHR165C GYP5Q12344 894 aa3.07□□□□□ -1.92
PRP8YHR165C RPL22AP05749 121 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C MRP8P35719 219 aa3.07□□□□□ -1.92
PRP8YHR165C YKL023WP36103 277 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C TAN1P53072 289 aaPredicted RBP3.07□□□□□ -1.92
PRP8YHR165C SUP35P05453 685 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C PRT1P06103 763 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C REC107P21651 314 aa3.07□□□□□ -1.92
PRP8YHR165C UBP1P25037 809 aa3.07□□□□□ -1.92
PRP8YHR165C SEC6P32844 805 aa3.07□□□□□ -1.92
PRP8YHR165C GDT1P38301 280 aaPredicted RBP3.07□□□□□ -1.92
PRP8YHR165C RRT14P40470 206 aa3.07□□□□□ -1.92
PRP8YHR165C TIM54P47045 478 aa3.07□□□□□ -1.92
PRP8YHR165C ZIP1P31111 875 aa3.07□□□□□ -1.92
PRP8YHR165C CSE4P36012 229 aa3.07□□□□□ -1.92
PRP8YHR165C PHM8P40025 321 aa3.07□□□□□ -1.92
PRP8YHR165C YNL050CP53952 270 aa3.07□□□□□ -1.92
PRP8YHR165C MAS2P11914 482 aa3.07□□□□□ -1.92
PRP8YHR165C CDC60P26637 1090 aaKnown RBP3.07□□□□□ -1.92
PRP8YHR165C ARP5P53946 755 aa3.07□□□□□ -1.92
PRP8YHR165C VPS33P20795 691 aa3.06□□□□□ -1.92
PRP8YHR165C DAL80P26343 269 aa3.06□□□□□ -1.92
PRP8YHR165C KIP2P28743 706 aa3.06□□□□□ -1.92
PRP8YHR165C MNR2P35724 969 aa3.06□□□□□ -1.92
PRP8YHR165C GLG2P47011 380 aa3.06□□□□□ -1.92
PRP8YHR165C YBL111CQ3E7Y5 667 aa3.06□□□□□ -1.92
PRP8YHR165C FRS1P15624 595 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C CNS1P33313 385 aa3.06□□□□□ -1.92
PRP8YHR165C TY4A-JP47023 414 aa3.06□□□□□ -1.92
PRP8YHR165C ELA1P53861 379 aaPredicted RBP3.06□□□□□ -1.92
PRP8YHR165C HOT1Q03213 719 aa3.06□□□□□ -1.92
PRP8YHR165C DBP3P20447 523 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C SWI3P32591 825 aa3.06□□□□□ -1.92
PRP8YHR165C YBR238CP38330 731 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C VPS45P38932 577 aa3.06□□□□□ -1.92
PRP8YHR165C YPP1P46951 817 aa3.06□□□□□ -1.92
PRP8YHR165C SHE4P51534 789 aa3.06□□□□□ -1.92
PRP8YHR165C UFD2P54860 961 aa3.06□□□□□ -1.92
PRP8YHR165C RAT1Q02792 1006 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C RRB1Q04225 511 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C MMR1Q06324 491 aa3.06□□□□□ -1.92
PRP8YHR165C ENT1Q12518 454 aa3.06□□□□□ -1.92
PRP8YHR165C APC1P53886 1748 aa3.06□□□□□ -1.92
PRP8YHR165C NUP192P47054 1683 aa3.06□□□□□ -1.92
PRP8YHR165C RPO41P13433 1351 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C BNR1P40450 1375 aa3.06□□□□□ -1.92
PRP8YHR165C TAF5P38129 798 aa3.06□□□□□ -1.92
PRP8YHR165C PSD2P53037 1138 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C SNF2P22082 1703 aa3.06□□□□□ -1.92
PRP8YHR165C CAF20P12962 161 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C VID30P53076 958 aa3.06□□□□□ -1.92
PRP8YHR165C HOP2P53187 214 aa3.06□□□□□ -1.92
PRP8YHR165C RPA190P10964 1664 aaKnown RBP3.06□□□□□ -1.92
PRP8YHR165C MGM1P32266 881 aa3.05□□□□□ -1.92
PRP8YHR165C GCD6P32501 712 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C CNN1P43618 361 aa3.05□□□□□ -1.92
PRP8YHR165C NTE1Q04958 1679 aa3.05□□□□□ -1.92
PRP8YHR165C CDC31P06704 161 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C RPN5Q12250 445 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C SSB1P11484 613 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C RPC53P25441 422 aa3.05□□□□□ -1.92
PRP8YHR165C SSP1P38871 571 aa3.05□□□□□ -1.92
PRP8YHR165C SSB2P40150 613 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C RSC30P38781 883 aa3.05□□□□□ -1.92
PRP8YHR165C NDC80P40460 691 aa3.05□□□□□ -1.92
PRP8YHR165C PEX14P53112 341 aa3.05□□□□□ -1.92
PRP8YHR165C ENV11P53246 860 aa3.05□□□□□ -1.92
PRP8YHR165C NAF1P53919 492 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C RRP36Q12481 300 aaPredicted RBP3.05□□□□□ -1.92
PRP8YHR165C RKM4Q12504 494 aa3.05□□□□□ -1.92
PRP8YHR165C BFA1P47113 574 aa3.05□□□□□ -1.92
PRP8YHR165C HDA1P53973 706 aa3.05□□□□□ -1.92
PRP8YHR165C CLU1Q03690 1277 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C SYF1Q04048 859 aaPredicted RBP3.05□□□□□ -1.92
PRP8YHR165C VTA1Q06263 330 aa3.05□□□□□ -1.92
PRP8YHR165C ROM2P51862 1356 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C HIS4P00815 799 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C NIP100P33420 868 aa3.05□□□□□ -1.92
PRP8YHR165C TIF5P38431 405 aaKnown RBP3.05□□□□□ -1.92
PRP8YHR165C SAP155P43612 1002 aa3.05□□□□□ -1.92
PRP8YHR165C TBF1Q02457 562 aa3.05□□□□□ -1.92
PRP8YHR165C SRL4Q03085 281 aa3.05□□□□□ -1.92
PRP8YHR165C SHS1Q07657 551 aa3.05□□□□□ -1.92
PRP8YHR165C SEC7P11075 2009 aaKnown RBP3.04□□□□□ -1.92
PRP8YHR165C PRP5P21372 849 aaPredicted RBP3.04□□□□□ -1.92
PRP8YHR165C PEP12P32854 288 aa3.04□□□□□ -1.92
PRP8YHR165C ESL2P36168 1195 aa3.04□□□□□ -1.92
PRP8YHR165C LDH1P38139 375 aa3.04□□□□□ -1.92
PRP8YHR165C SNX41Q04053 625 aa3.04□□□□□ -1.92
PRP8YHR165C NSI1Q12457 570 aa3.04□□□□□ -1.92
PRP8YHR165C STE11P23561 717 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms