RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W YBR287WP38355 427 aa2.66□□□□□ -1.98
TRA1YHR099W FAR11P53917 953 aa2.66□□□□□ -1.98
TRA1YHR099W EDE1P34216 1381 aa2.66□□□□□ -1.98
TRA1YHR099W NAF1P53919 492 aaKnown RBP2.66□□□□□ -1.98
TRA1YHR099W OPT2Q06593 877 aa2.66□□□□□ -1.98
TRA1YHR099W PEX15Q08215 383 aa2.66□□□□□ -1.98
TRA1YHR099W MAK5P38112 773 aaPredicted RBP2.66□□□□□ -1.98
TRA1YHR099W SPC72P39723 622 aa2.66□□□□□ -1.98
TRA1YHR099W EFM5P53200 248 aaKnown RBP2.66□□□□□ -1.98
TRA1YHR099W ATP14Q12349 124 aa2.66□□□□□ -1.98
TRA1YHR099W SEC31P38968 1273 aaKnown RBP2.66□□□□□ -1.98
TRA1YHR099W VPS20Q04272 221 aa2.66□□□□□ -1.98
TRA1YHR099W SEC39Q12745 709 aa2.66□□□□□ -1.98
TRA1YHR099W PEA2P40091 420 aa2.65□□□□□ -1.98
TRA1YHR099W RAD50P12753 1312 aa2.65□□□□□ -1.98
TRA1YHR099W ATG23Q06671 453 aa2.65□□□□□ -1.98
TRA1YHR099W YPL225WQ08971 146 aaKnown RBP2.65□□□□□ -1.98
TRA1YHR099W GCN2P15442 1659 aa2.65□□□□□ -1.98
TRA1YHR099W RPB2P08518 1224 aaKnown RBP2.65□□□□□ -1.98
TRA1YHR099W YSW1P38280 609 aa2.65□□□□□ -1.98
TRA1YHR099W HXT13P39924 564 aa2.65□□□□□ -1.98
TRA1YHR099W CIR1P42940 261 aa2.65□□□□□ -1.98
TRA1YHR099W SSK2P53599 1579 aa2.65□□□□□ -1.98
TRA1YHR099W RPL6BP05739 176 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W YCR016WP25617 290 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W PRP40P33203 583 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W YFL066CP43538 392 aa2.65□□□□□ -1.99
TRA1YHR099W YPR204WQ08995 1032 aa2.65□□□□□ -1.99
TRA1YHR099W PUS1Q12211 544 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W THR4P16120 514 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W SAC6P32599 642 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W SWH1P35845 1188 aa2.65□□□□□ -1.99
TRA1YHR099W ARA1P38115 344 aa2.65□□□□□ -1.99
TRA1YHR099W KTR4P38131 464 aa2.65□□□□□ -1.99
TRA1YHR099W KAP114P53067 1004 aa2.65□□□□□ -1.99
TRA1YHR099W ADF1Q2V2Q1 113 aa2.65□□□□□ -1.99
TRA1YHR099W IRR1P40541 1150 aa2.65□□□□□ -1.99
TRA1YHR099W NUP85P46673 744 aa2.65□□□□□ -1.99
TRA1YHR099W FAP1P53971 965 aa2.65□□□□□ -1.99
TRA1YHR099W MRP4P32902 394 aa2.65□□□□□ -1.99
TRA1YHR099W DMA1P38823 416 aa2.65□□□□□ -1.99
TRA1YHR099W RMD1Q03441 430 aa2.65□□□□□ -1.99
TRA1YHR099W YAP7Q08182 245 aa2.65□□□□□ -1.99
TRA1YHR099W MGA2P40578 1113 aa2.65□□□□□ -1.99
TRA1YHR099W SIW14P53965 281 aa2.65□□□□□ -1.99
TRA1YHR099W ERV25P54837 211 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W YBL111CQ3E7Y5 667 aa2.65□□□□□ -1.99
TRA1YHR099W PRP6P19735 899 aaPredicted RBP2.65□□□□□ -1.99
TRA1YHR099W VMA8P32610 256 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W SSP120P39931 234 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W MDG1P53885 366 aa2.65□□□□□ -1.99
TRA1YHR099W YLR419WQ06698 1435 aaKnown RBP2.65□□□□□ -1.99
TRA1YHR099W YLL054CQ12244 843 aa2.65□□□□□ -1.99
TRA1YHR099W MED4Q12343 284 aa2.65□□□□□ -1.99
TRA1YHR099W MCD4P36051 919 aa2.64□□□□□ -1.99
TRA1YHR099W TIF5P38431 405 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W EMW1P42842 904 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W NOP15P53927 220 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W SPO20Q04359 397 aa2.64□□□□□ -1.99
TRA1YHR099W PRM4Q12498 284 aa2.64□□□□□ -1.99
TRA1YHR099W SXM1Q04175 944 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W YMR111CQ04461 462 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W SNT1P25357 1226 aa2.64□□□□□ -1.99
TRA1YHR099W PSY4P38193 441 aa2.64□□□□□ -1.99
TRA1YHR099W YHR054CP38780 354 aa2.64□□□□□ -1.99
TRA1YHR099W RSC30P38781 883 aa2.64□□□□□ -1.99
TRA1YHR099W TFG2P41896 400 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W ALG2P43636 503 aa2.64□□□□□ -1.99
TRA1YHR099W COS5P47187 383 aa2.64□□□□□ -1.99
TRA1YHR099W CWH41P53008 833 aa2.64□□□□□ -1.99
TRA1YHR099W PRP3Q03338 469 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W AIM41Q12032 185 aa2.64□□□□□ -1.99
TRA1YHR099W TAF13P11747 167 aa2.64□□□□□ -1.99
TRA1YHR099W ADH7P25377 361 aa2.64□□□□□ -1.99
TRA1YHR099W DOM34P33309 386 aa2.64□□□□□ -1.99
TRA1YHR099W YMR147WP40218 223 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W PHB1P40961 287 aa2.64□□□□□ -1.99
TRA1YHR099W SAP155P43612 1002 aa2.64□□□□□ -1.99
TRA1YHR099W SPC105P53148 917 aa2.64□□□□□ -1.99
TRA1YHR099W ARP8Q12386 881 aaKnown RBP RIP-Chip data2.64□□□□□ -1.99not detected
TRA1YHR099W EFT1P32324 842 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W ATG26Q06321 1198 aa2.64□□□□□ -1.99
TRA1YHR099W NSL1Q12143 216 aa2.64□□□□□ -1.99
TRA1YHR099W NOT3P06102 836 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W YMR085WP0CF18 432 aa2.64□□□□□ -1.99
TRA1YHR099W GYL1Q04322 720 aa2.64□□□□□ -1.99
TRA1YHR099W MAG2Q06436 670 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W AOS1Q06624 347 aa2.64□□□□□ -1.99
TRA1YHR099W NEW1Q08972 1196 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W MGE1P38523 228 aa2.64□□□□□ -1.99
TRA1YHR099W STU2P46675 888 aa2.64□□□□□ -1.99
TRA1YHR099W ZDS2P54786 942 aa2.64□□□□□ -1.99
TRA1YHR099W ENV9Q08651 330 aa2.64□□□□□ -1.99
TRA1YHR099W VMA4P22203 233 aaKnown RBP2.64□□□□□ -1.99
TRA1YHR099W ECM25P32525 599 aa2.64□□□□□ -1.99
TRA1YHR099W UBC6P33296 250 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W VPS35P34110 944 aa2.64□□□□□ -1.99
TRA1YHR099W SPC42P36094 363 aa2.64□□□□□ -1.99
TRA1YHR099W UBP10P53874 792 aaPredicted RBP2.64□□□□□ -1.99
TRA1YHR099W YDR341CQ05506 607 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 182.9 ms