RNA–Protein interactions for RNA: YHR089C

GAR1, Transcript of Protein component of the H/ACA snoRNP pseudouridylase complex, yeastyeast

Gene GAR1, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GAR1YHR089C YPL260WQ08977 551 aa16.49■□□□□ 0.23
GAR1YHR089C KEL3Q08979 651 aaPredicted RBP16.49■□□□□ 0.23
GAR1YHR089C SSF2Q12153 453 aaPredicted RBP16.49■□□□□ 0.23
GAR1YHR089C RAD53P22216 821 aa16.48■□□□□ 0.23
GAR1YHR089C ADP1P25371 1049 aa16.47■□□□□ 0.23
GAR1YHR089C SKI2P35207 1287 aaKnown RBP RIP-Chip data16.47■□□□□ 0.23not detected
GAR1YHR089C SLN1P39928 1220 aaPredicted RBP16.47■□□□□ 0.23
GAR1YHR089C YIL089WP40500 205 aa16.47■□□□□ 0.23
GAR1YHR089C CSR2Q12734 1121 aa16.47■□□□□ 0.23
GAR1YHR089C TPM1P17536 199 aaKnown RBP16.46■□□□□ 0.23
GAR1YHR089C YHL050CP38721 697 aa16.46■□□□□ 0.23
GAR1YHR089C KEL1P38853 1164 aaKnown RBP16.46■□□□□ 0.23
GAR1YHR089C RRP8P38961 392 aaKnown RBP16.46■□□□□ 0.23
GAR1YHR089C CHO2P05374 869 aaKnown RBP16.45■□□□□ 0.22
GAR1YHR089C TYW1Q08960 810 aaKnown RBP16.45■□□□□ 0.22
GAR1YHR089C PMA1P05030 918 aaKnown RBP16.44■□□□□ 0.22
GAR1YHR089C KIN1P13185 1064 aa16.44■□□□□ 0.22
GAR1YHR089C RPS15Q01855 142 aaKnown RBP16.44■□□□□ 0.22
GAR1YHR089C GAL2P13181 574 aa16.43■□□□□ 0.22
GAR1YHR089C MRD1Q06106 887 aaKnown RBP16.43■□□□□ 0.22
GAR1YHR089C RAD61Q99359 647 aa16.43■□□□□ 0.22
GAR1YHR089C CRG1P38892 291 aaRIP-Chip data16.42■□□□□ 0.22not detected
GAR1YHR089C YBL028CP38202 106 aa16.41■□□□□ 0.22
GAR1YHR089C SPN1Q06505 410 aaPredicted RBP16.41■□□□□ 0.22
GAR1YHR089C CIC1P38779 376 aaKnown RBP16.4■□□□□ 0.22
GAR1YHR089C UFD2P54860 961 aa16.4■□□□□ 0.22
GAR1YHR089C YDL124WQ07551 312 aaKnown RBP16.4■□□□□ 0.22
GAR1YHR089C PRE8P23639 250 aa16.39■□□□□ 0.21
GAR1YHR089C AIM9P40053 627 aaKnown RBP16.39■□□□□ 0.21
GAR1YHR089C VID27P40157 782 aa16.39■□□□□ 0.21
GAR1YHR089C TRL1P09880 827 aaKnown RBP16.38■□□□□ 0.21
GAR1YHR089C MPH3P0CE00 602 aa16.38■□□□□ 0.21
GAR1YHR089C TPS3P38426 1054 aaKnown RBP16.38■□□□□ 0.21
GAR1YHR089C SPO22P40511 975 aa16.38■□□□□ 0.21
GAR1YHR089C RRT6P53117 311 aaPredicted RBP16.38■□□□□ 0.21
GAR1YHR089C PGA3Q12746 312 aaKnown RBP16.38■□□□□ 0.21
GAR1YHR089C PEP3P27801 918 aa16.37■□□□□ 0.21
GAR1YHR089C RER2P35196 286 aa16.37■□□□□ 0.21
GAR1YHR089C MYO3P36006 1272 aa16.37■□□□□ 0.21
GAR1YHR089C PNT1P38969 423 aa16.37■□□□□ 0.21
GAR1YHR089C YIR014WP40570 242 aa16.37■□□□□ 0.21
GAR1YHR089C SNU71P53207 620 aaKnown RBP16.37■□□□□ 0.21
GAR1YHR089C TUB2P02557 457 aaKnown RBP16.36■□□□□ 0.21
GAR1YHR089C SRM1P21827 482 aa16.36■□□□□ 0.21
GAR1YHR089C IMP2'P32351 346 aa16.36■□□□□ 0.21
GAR1YHR089C SKG3Q06315 1026 aa16.36■□□□□ 0.21
GAR1YHR089C PFK2P16862 959 aaKnown RBP RIP-Chip data16.35■□□□□ 0.21not detected
GAR1YHR089C CST26P38226 397 aa16.35■□□□□ 0.21
GAR1YHR089C ANP1P32629 500 aa16.34■□□□□ 0.21
GAR1YHR089C TOM1Q03280 3268 aa16.33■□□□□ 0.2
GAR1YHR089C PRO3P32263 286 aaKnown RBP16.32■□□□□ 0.2
GAR1YHR089C HDA1P53973 706 aa16.32■□□□□ 0.2
GAR1YHR089C VPS8P39702 1274 aa16.31■□□□□ 0.2
GAR1YHR089C ECM23Q02710 187 aa16.31■□□□□ 0.2
GAR1YHR089C GIN4Q12263 1142 aa16.31■□□□□ 0.2
GAR1YHR089C RIT1P23796 513 aa16.3■□□□□ 0.2
GAR1YHR089C PCS60P38137 543 aaKnown RBP RIP-Chip data16.3■□□□□ 0.2not detected
GAR1YHR089C KRI1P42846 591 aaKnown RBP16.3■□□□□ 0.2
GAR1YHR089C PTK2P47116 818 aaKnown RBP16.3■□□□□ 0.2
GAR1YHR089C EST2Q06163 884 aa16.3■□□□□ 0.2
GAR1YHR089C ACA1P39970 489 aa16.29■□□□□ 0.2
GAR1YHR089C ESF1Q06344 628 aaKnown RBP16.29■□□□□ 0.2
GAR1YHR089C LAP2Q10740 671 aa16.29■□□□□ 0.2
GAR1YHR089C RNR2P09938 399 aaKnown RBP16.28■□□□□ 0.2
GAR1YHR089C HVG1P0CE11 249 aa16.28■□□□□ 0.2
GAR1YHR089C CHS3P29465 1165 aa16.28■□□□□ 0.2
GAR1YHR089C ETP1P38748 585 aaKnown RBP16.28■□□□□ 0.2
GAR1YHR089C PES4P39684 611 aa16.28■□□□□ 0.2
GAR1YHR089C TIF4631P39935 952 aaKnown RBP16.28■□□□□ 0.2
GAR1YHR089C TFC6Q06339 672 aa16.28■□□□□ 0.2
GAR1YHR089C TUS1Q06412 1307 aa16.27■□□□□ 0.2
GAR1YHR089C BSD2P38356 321 aa16.27■□□□□ 0.2
GAR1YHR089C MYO5Q04439 1219 aaKnown RBP16.27■□□□□ 0.2
GAR1YHR089C MAK31P23059 88 aa16.26■□□□□ 0.19
GAR1YHR089C SPT21P35209 758 aa16.26■□□□□ 0.19
GAR1YHR089C RPT6Q01939 405 aaKnown RBP16.25■□□□□ 0.19
GAR1YHR089C FBP26P32604 452 aa16.24■□□□□ 0.19
GAR1YHR089C VID28P40547 921 aa16.24■□□□□ 0.19
GAR1YHR089C PEX29Q03370 554 aa16.24■□□□□ 0.19
GAR1YHR089C SUB2Q07478 446 aaKnown RBP16.24■□□□□ 0.19
GAR1YHR089C ERG12P07277 443 aa16.23■□□□□ 0.19
GAR1YHR089C FOL1P53848 824 aa16.23■□□□□ 0.19
GAR1YHR089C RLF2Q12495 606 aa16.23■□□□□ 0.19
GAR1YHR089C ACE2P21192 770 aa16.22■□□□□ 0.19
GAR1YHR089C OCT1P35999 772 aa16.22■□□□□ 0.19
GAR1YHR089C SIS2P36024 562 aa16.22■□□□□ 0.19
GAR1YHR089C CSM2P40465 213 aa16.22■□□□□ 0.19
GAR1YHR089C ALG2P43636 503 aa16.22■□□□□ 0.19
GAR1YHR089C CLF1Q12309 687 aaPredicted RBP16.22■□□□□ 0.19
GAR1YHR089C MATALPHA2P0CY08 210 aa16.21■□□□□ 0.19
GAR1YHR089C HMLALPHA2P0CY09 210 aa16.21■□□□□ 0.19
GAR1YHR089C KRS1P15180 591 aaKnown RBP16.21■□□□□ 0.19
GAR1YHR089C SAM2P19358 384 aaKnown RBP16.2■□□□□ 0.18
GAR1YHR089C SPB4P25808 606 aaPredicted RBP16.2■□□□□ 0.18
GAR1YHR089C RPL8BP29453 256 aaKnown RBP16.2■□□□□ 0.18
GAR1YHR089C ARP5P53946 755 aa16.2■□□□□ 0.18
GAR1YHR089C VPS30Q02948 557 aa16.2■□□□□ 0.18
GAR1YHR089C CST9Q06032 482 aa16.2■□□□□ 0.18
GAR1YHR089C NUC1P08466 329 aa16.19■□□□□ 0.18
GAR1YHR089C YKE2P52553 114 aa16.19■□□□□ 0.18
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms