RNA–Protein interactions for RNA: YGR109W-B

YGR109W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR109W-B, Length 4,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-BYGR109W-B ACF4P47129 309 aa2.4□□□□□ -2.02
YGR109W-BYGR109W-B ATG1P53104 897 aa2.4□□□□□ -2.03
YGR109W-BYGR109W-B SLN1P39928 1220 aaPredicted RBP2.4□□□□□ -2.03
YGR109W-BYGR109W-B ECM2P38241 364 aaKnown RBP2.4□□□□□ -2.03
YGR109W-BYGR109W-B SHU2P38957 223 aa2.4□□□□□ -2.03
YGR109W-BYGR109W-B IRC24P40580 263 aa2.4□□□□□ -2.03
YGR109W-BYGR109W-B BSD2P38356 321 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B PRY1P47032 299 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B GCV1P48015 400 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B SUB2Q07478 446 aaKnown RBP2.39□□□□□ -2.03
YGR109W-BYGR109W-B CHS2P14180 963 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B PSY2P40164 858 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B FET4P40988 552 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B SOK2P53438 785 aaPredicted RBP2.39□□□□□ -2.03
YGR109W-BYGR109W-B SSA1P10591 642 aaKnown RBP2.39□□□□□ -2.03
YGR109W-BYGR109W-B ELG1Q12050 791 aa2.39□□□□□ -2.03
YGR109W-BYGR109W-B OMA1P36163 345 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B SPO74P45819 413 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B NOB1Q08444 459 aaKnown RBP2.38□□□□□ -2.03
YGR109W-BYGR109W-B TY1A-NL1Q12391 440 aaKnown RBP2.38□□□□□ -2.03
YGR109W-BYGR109W-B PUB1P32588 453 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
YGR109W-BYGR109W-B ALD3P54114 506 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B EMG1Q06287 252 aaKnown RBP2.38□□□□□ -2.03
YGR109W-BYGR109W-B PAN5P38787 379 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B RGD2P43556 714 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B RSC4Q02206 625 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B AOS1Q06624 347 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B TED1P40533 473 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B MSH6Q03834 1242 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B REC8Q12188 680 aa2.38□□□□□ -2.03
YGR109W-BYGR109W-B CDC3P32457 520 aaKnown RBP2.37□□□□□ -2.03
YGR109W-BYGR109W-B POL5P39985 1022 aaKnown RBP2.37□□□□□ -2.03
YGR109W-BYGR109W-B NEO1P40527 1151 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B SUT1P53032 299 aaKnown RBP2.37□□□□□ -2.03
YGR109W-BYGR109W-B YGR130CP53278 816 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B KAR5Q04746 504 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B PMT7Q06644 662 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B YLR122CQ12312 125 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B INP52P50942 1183 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B YOR223WQ12015 292 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B ELM1P32801 640 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B BOI1P38041 980 aaKnown RBP2.37□□□□□ -2.03
YGR109W-BYGR109W-B GLO4Q12320 285 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B KOG1P38873 1557 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B YIG1Q08956 461 aa2.37□□□□□ -2.03
YGR109W-BYGR109W-B HVG1P0CE11 249 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B SAM37P50110 327 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B TIF6Q12522 245 aaKnown RBP2.36□□□□□ -2.03
YGR109W-BYGR109W-B YJL181WP46987 611 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B ECL1P48235 211 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B ENV11P53246 860 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B GIC2Q06648 383 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B PUF3Q07807 879 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
YGR109W-BYGR109W-B PRP5P21372 849 aaPredicted RBP2.36□□□□□ -2.03
YGR109W-BYGR109W-B CIC1P38779 376 aaKnown RBP2.36□□□□□ -2.03
YGR109W-BYGR109W-B CIT3P43635 486 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B YJR124CP47159 448 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B YNL011CP53980 444 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B CDC55Q00362 526 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B MCA1Q08601 432 aa2.36□□□□□ -2.03
YGR109W-BYGR109W-B PYC2P32327 1180 aaKnown RBP2.35□□□□□ -2.03
YGR109W-BYGR109W-B HAS1Q03532 505 aaKnown RBP2.35□□□□□ -2.03
YGR109W-BYGR109W-B TRS120Q04183 1289 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B GEF1P37020 779 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B SAP155P43612 1002 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B NCE103P53615 221 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B KAR2P16474 682 aaKnown RBP2.35□□□□□ -2.03
YGR109W-BYGR109W-B MEC3Q02574 474 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B TOS1P38288 455 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B GLO3P38682 493 aaKnown RBP2.35□□□□□ -2.03
YGR109W-BYGR109W-B YML083CQ04526 418 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B YMR074CQ04773 145 aa2.35□□□□□ -2.03
YGR109W-BYGR109W-B RIM11P38615 370 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B QDR1P40475 563 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B LIP5P32875 414 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B HSE1P38753 452 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B BOL3P39724 118 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B RVS167P39743 482 aaKnown RBP2.34□□□□□ -2.03
YGR109W-BYGR109W-B NIT1P40447 199 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B MMM1P41800 426 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B BSC2Q05611 235 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B BRE4Q07660 1125 aa2.34□□□□□ -2.03
YGR109W-BYGR109W-B MRP10O75012 95 aa2.34□□□□□ -2.04
YGR109W-BYGR109W-B GCD6P32501 712 aaKnown RBP2.34□□□□□ -2.04
YGR109W-BYGR109W-B TAF13P11747 167 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B NNK1P36003 928 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B TFA2P36145 328 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B UTP22P53254 1237 aaPredicted RBP2.33□□□□□ -2.04
YGR109W-BYGR109W-B ALO1P54783 526 aaKnown RBP2.33□□□□□ -2.04
YGR109W-BYGR109W-B MTR4P47047 1073 aaKnown RBP2.33□□□□□ -2.04
YGR109W-BYGR109W-B GAS5Q08193 484 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B RPB10P22139 70 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B YKL077WP36081 392 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B AKR1P39010 764 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B YNR065CP53751 1116 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B YKR073CP36153 106 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B PRP43P53131 767 aaKnown RBP2.33□□□□□ -2.04
YGR109W-BYGR109W-B ORC3P54790 616 aa2.33□□□□□ -2.04
YGR109W-BYGR109W-B MAG2Q06436 670 aaKnown RBP2.33□□□□□ -2.04
YGR109W-BYGR109W-B FLP1P03870 423 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms