RNA–Protein interactions for RNA: YGL120C

PRP43, Transcript of RNA helicase in the DEAH-box family, yeastyeast

Gene PRP43, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP43YGL120C ARV1Q06541 321 aa5.29□□□□□ -1.56
PRP43YGL120C ARR2Q06597 130 aa5.29□□□□□ -1.56
PRP43YGL120C IOC2Q12072 812 aa5.29□□□□□ -1.56
PRP43YGL120C RIO1Q12196 484 aaKnown RBP5.29□□□□□ -1.56
PRP43YGL120C YBL111CQ3E7Y5 667 aa5.29□□□□□ -1.56
PRP43YGL120C MRPS28P21771 286 aa5.29□□□□□ -1.56
PRP43YGL120C SKI2P35207 1287 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
PRP43YGL120C RTC4P53850 401 aa5.29□□□□□ -1.56
PRP43YGL120C SPP1Q03012 353 aa5.29□□□□□ -1.56
PRP43YGL120C VTI1Q04338 217 aa5.29□□□□□ -1.56
PRP43YGL120C LCD1Q04377 747 aa5.29□□□□□ -1.56
PRP43YGL120C ENT2Q05785 613 aa5.29□□□□□ -1.56
PRP43YGL120C NNT1Q05874 261 aa5.29□□□□□ -1.56
PRP43YGL120C TSR1Q07381 788 aaKnown RBP5.29□□□□□ -1.56
PRP43YGL120C CIR2Q08822 631 aa5.29□□□□□ -1.56
PRP43YGL120C SMC4Q12267 1418 aa5.28□□□□□ -1.56
PRP43YGL120C NAT1P12945 854 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C TPM1P17536 199 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C PAP1P29468 568 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C MET4P32389 672 aa5.28□□□□□ -1.56
PRP43YGL120C YER034WP40022 185 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C IRR1P40541 1150 aa5.28□□□□□ -1.56
PRP43YGL120C YAP5P40574 245 aa5.28□□□□□ -1.56
PRP43YGL120C YFR006WP43590 535 aa5.28□□□□□ -1.56
PRP43YGL120C SRB7P47822 140 aa5.28□□□□□ -1.56
PRP43YGL120C YNL035CP53962 389 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C INP2Q03824 705 aa5.28□□□□□ -1.56
PRP43YGL120C YDL144CQ07589 356 aa5.28□□□□□ -1.56
PRP43YGL120C DNL4Q08387 944 aaPredicted RBP5.28□□□□□ -1.56
PRP43YGL120C ARP8Q12386 881 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
PRP43YGL120C TCB1Q12466 1186 aa5.28□□□□□ -1.56
PRP43YGL120C TRM732Q03496 1420 aa5.28□□□□□ -1.56
PRP43YGL120C STE11P23561 717 aa5.28□□□□□ -1.56
PRP43YGL120C PET112P33893 541 aa5.28□□□□□ -1.56
PRP43YGL120C TTI1P36097 1038 aa5.28□□□□□ -1.56
PRP43YGL120C OSH3P38713 996 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C OTU2P38747 307 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C PXA1P41909 870 aa5.28□□□□□ -1.56
PRP43YGL120C LSC1P53598 329 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C CSR1Q06705 408 aaKnown RBP5.28□□□□□ -1.56
PRP43YGL120C YOR352WQ08816 343 aa5.28□□□□□ -1.56
PRP43YGL120C SWI1P09547 1314 aa5.27□□□□□ -1.57
PRP43YGL120C ATG3P40344 310 aa5.27□□□□□ -1.57
PRP43YGL120C EFM5P53200 248 aaKnown RBP5.27□□□□□ -1.57
PRP43YGL120C DCP2P53550 970 aaKnown RBP5.27□□□□□ -1.57
PRP43YGL120C DBP9Q06218 594 aaKnown RBP5.27□□□□□ -1.57
PRP43YGL120C CHS5Q12114 671 aaKnown RBP5.27□□□□□ -1.57
PRP43YGL120C MER1P16523 270 aa5.26□□□□□ -1.57
PRP43YGL120C TPD3P31383 635 aa5.26□□□□□ -1.57
PRP43YGL120C KAR9P32526 644 aa5.26□□□□□ -1.57
PRP43YGL120C MRPL40P36534 297 aa5.26□□□□□ -1.57
PRP43YGL120C RTT106P40161 455 aa5.26□□□□□ -1.57
PRP43YGL120C TEA1P47988 759 aa5.26□□□□□ -1.57
PRP43YGL120C RTF1P53064 558 aa5.26□□□□□ -1.57
PRP43YGL120C LSG1P53145 640 aaKnown RBP5.26□□□□□ -1.57
PRP43YGL120C NOP15P53927 220 aaPredicted RBP5.26□□□□□ -1.57
PRP43YGL120C RRN11Q04712 507 aa5.26□□□□□ -1.57
PRP43YGL120C ANP1P32629 500 aa5.26□□□□□ -1.57
PRP43YGL120C ALG2P43636 503 aa5.26□□□□□ -1.57
PRP43YGL120C SDA1P53313 767 aaKnown RBP5.26□□□□□ -1.57
PRP43YGL120C GNT1Q12096 491 aa5.26□□□□□ -1.57
PRP43YGL120C SWC3P31376 625 aa5.25□□□□□ -1.57
PRP43YGL120C CSE1P33307 960 aa5.25□□□□□ -1.57
PRP43YGL120C MRP8P35719 219 aa5.25□□□□□ -1.57
PRP43YGL120C APL2P36000 726 aaPredicted RBP5.25□□□□□ -1.57
PRP43YGL120C RFC1P38630 861 aaKnown RBP5.25□□□□□ -1.57
PRP43YGL120C RIC1P40395 1056 aa5.25□□□□□ -1.57
PRP43YGL120C IML2P47031 731 aa5.25□□□□□ -1.57
PRP43YGL120C ASI1P54074 624 aa5.25□□□□□ -1.57
PRP43YGL120C RNH1Q04740 348 aa5.25□□□□□ -1.57
PRP43YGL120C YIG1Q08956 461 aa5.25□□□□□ -1.57
PRP43YGL120C PDR10P51533 1564 aa5.25□□□□□ -1.57
PRP43YGL120C TY1B-DR4Q07793 1604 aa5.25□□□□□ -1.57
PRP43YGL120C LEU1P07264 779 aaKnown RBP5.25□□□□□ -1.57
PRP43YGL120C PTR2P32901 601 aa5.25□□□□□ -1.57
PRP43YGL120C SEC66P33754 206 aa5.25□□□□□ -1.57
PRP43YGL120C BMH2P34730 273 aaKnown RBP5.25□□□□□ -1.57
PRP43YGL120C BFR1P38934 470 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57 RIP-Chip
PRP43YGL120C FMP30Q02883 468 aa5.25□□□□□ -1.57
PRP43YGL120C TRM3Q07527 1436 aa5.25□□□□□ -1.57
PRP43YGL120C SPT6P23615 1451 aaKnown RBP5.24□□□□□ -1.57
PRP43YGL120C DPS1P04802 557 aaKnown RBP5.24□□□□□ -1.57
PRP43YGL120C VMA1P17255 1071 aaKnown RBP5.24□□□□□ -1.57
PRP43YGL120C HNM1P19807 563 aa5.24□□□□□ -1.57
PRP43YGL120C CDC10P25342 322 aaKnown RBP5.24□□□□□ -1.57
PRP43YGL120C MCM2P29469 868 aa5.24□□□□□ -1.57
PRP43YGL120C HSM3P38348 480 aa5.24□□□□□ -1.57
PRP43YGL120C RPN4Q03465 531 aa5.24□□□□□ -1.57
PRP43YGL120C ECM11Q04110 302 aa5.24□□□□□ -1.57
PRP43YGL120C SPP382Q06411 708 aaPredicted RBP5.24□□□□□ -1.57
PRP43YGL120C PDR18P53756 1333 aa5.24□□□□□ -1.57
PRP43YGL120C RTG2P32608 588 aaKnown RBP5.24□□□□□ -1.57
PRP43YGL120C VPS35P34110 944 aa5.24□□□□□ -1.57
PRP43YGL120C TFC3P34111 1160 aa5.24□□□□□ -1.57
PRP43YGL120C APD1P38281 316 aa5.24□□□□□ -1.57
PRP43YGL120C TMN3P40071 706 aa5.24□□□□□ -1.57
PRP43YGL120C CEP3P40969 608 aa5.24□□□□□ -1.57
PRP43YGL120C GCD10P41814 478 aa5.24□□□□□ -1.57
PRP43YGL120C HOT1Q03213 719 aa5.24□□□□□ -1.57
PRP43YGL120C YML108WQ03759 105 aa5.24□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 9.7 ms