RNA–Protein interactions for RNA: YFR050C

PRE4, Transcript of Beta 7 subunit of the 20S proteasome, yeastyeast

Gene PRE4, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE4YFR050C RRT14P40470 206 aa3.81□□□□□ -1.8
PRE4YFR050C FIG4P42837 879 aa3.81□□□□□ -1.8
PRE4YFR050C CWC15Q03772 175 aaKnown RBP3.81□□□□□ -1.8
PRE4YFR050C MET32Q12041 191 aa3.81□□□□□ -1.8
PRE4YFR050C HIP1P06775 603 aa3.8□□□□□ -1.8
PRE4YFR050C UGA3P26370 528 aa3.8□□□□□ -1.8
PRE4YFR050C GUT2P32191 649 aa3.8□□□□□ -1.8
PRE4YFR050C ASH1P34233 588 aa3.8□□□□□ -1.8
PRE4YFR050C PNT1P38969 423 aa3.8□□□□□ -1.8
PRE4YFR050C VID30P53076 958 aa3.8□□□□□ -1.8
PRE4YFR050C YNL108CP53929 270 aa3.8□□□□□ -1.8
PRE4YFR050C GCR2Q01722 534 aa3.8□□□□□ -1.8
PRE4YFR050C STE20Q03497 939 aaKnown RBP3.8□□□□□ -1.8
PRE4YFR050C TCB1Q12466 1186 aa3.8□□□□□ -1.8
PRE4YFR050C AFT1P22149 690 aa3.79□□□□□ -1.8
PRE4YFR050C YDJ1P25491 409 aaKnown RBP3.79□□□□□ -1.8
PRE4YFR050C MCM16Q12262 181 aa3.79□□□□□ -1.8
PRE4YFR050C ISF1P32488 338 aa3.78□□□□□ -1.8
PRE4YFR050C BIM1P40013 344 aa3.78□□□□□ -1.8
PRE4YFR050C YPP1P46951 817 aa3.78□□□□□ -1.8
PRE4YFR050C SMY1P32364 656 aaKnown RBP3.77□□□□□ -1.81
PRE4YFR050C MRT4P33201 236 aaKnown RBP3.77□□□□□ -1.81
PRE4YFR050C WHI3P34761 661 aaKnown RBP3.77□□□□□ -1.81
PRE4YFR050C ATG32P40458 529 aa3.77□□□□□ -1.81
PRE4YFR050C EMP47P43555 445 aa3.77□□□□□ -1.81
PRE4YFR050C TIF1P10081 395 aaKnown RBP3.76□□□□□ -1.81
PRE4YFR050C SGD1Q06132 899 aa3.76□□□□□ -1.81
PRE4YFR050C YPR084WQ06821 456 aa3.76□□□□□ -1.81
PRE4YFR050C FRA1Q07825 749 aa3.76□□□□□ -1.81
PRE4YFR050C DAP1Q12091 152 aa3.76□□□□□ -1.81
PRE4YFR050C ENO2P00925 437 aaKnown RBP3.75□□□□□ -1.81
PRE4YFR050C RPS9BP05755 195 aaKnown RBP3.75□□□□□ -1.81
PRE4YFR050C MKS1P34072 584 aa3.75□□□□□ -1.81
PRE4YFR050C ATG3P40344 310 aa3.75□□□□□ -1.81
PRE4YFR050C EMW1P42842 904 aaKnown RBP3.75□□□□□ -1.81
PRE4YFR050C YJR115WP47152 169 aa3.75□□□□□ -1.81
PRE4YFR050C YLL067CQ07888 1374 aa3.75□□□□□ -1.81
PRE4YFR050C YLL066CQ99208 1374 aa3.75□□□□□ -1.81
PRE4YFR050C SUP45P12385 437 aaKnown RBP3.74□□□□□ -1.81
PRE4YFR050C MET22P32179 357 aa3.74□□□□□ -1.81
PRE4YFR050C GSC2P40989 1895 aa3.73□□□□□ -1.81
PRE4YFR050C LDH1P38139 375 aa3.73□□□□□ -1.81
PRE4YFR050C PTK2P47116 818 aaKnown RBP3.73□□□□□ -1.81
PRE4YFR050C CAB1Q04430 367 aa3.73□□□□□ -1.81
PRE4YFR050C ECM30Q06673 1274 aa3.73□□□□□ -1.81
PRE4YFR050C BDS1Q08347 646 aa3.73□□□□□ -1.81
PRE4YFR050C YPR204WQ08995 1032 aa3.73□□□□□ -1.81
PRE4YFR050C YDL176WQ12027 708 aa3.73□□□□□ -1.81
PRE4YFR050C RPP2BP02400 110 aaKnown RBP3.72□□□□□ -1.81
PRE4YFR050C ARG82P07250 355 aa3.72□□□□□ -1.81
PRE4YFR050C GBP2P25555 427 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PRE4YFR050C FBP26P32604 452 aa3.72□□□□□ -1.81
PRE4YFR050C BOI1P38041 980 aaKnown RBP3.72□□□□□ -1.81
PRE4YFR050C RIM21P48565 533 aa3.72□□□□□ -1.81
PRE4YFR050C VPS62P53285 467 aa3.72□□□□□ -1.81
PRE4YFR050C MAP1Q01662 387 aaKnown RBP RIP-Chip data3.72□□□□□ -1.81not detected
PRE4YFR050C TIM50Q02776 476 aa3.72□□□□□ -1.81
PRE4YFR050C DFG5Q05031 458 aa3.72□□□□□ -1.81
PRE4YFR050C ISR1Q06098 443 aaKnown RBP3.72□□□□□ -1.81
PRE4YFR050C ENO1P00924 437 aaKnown RBP3.71□□□□□ -1.82
PRE4YFR050C YKU70P32807 602 aa3.71□□□□□ -1.82
PRE4YFR050C SOH1P38633 127 aa3.71□□□□□ -1.82
PRE4YFR050C CHZ1P40019 153 aaPredicted RBP3.71□□□□□ -1.82
PRE4YFR050C PSF2P40359 213 aa3.71□□□□□ -1.82
PRE4YFR050C YLR225CQ05948 407 aaKnown RBP3.71□□□□□ -1.82
PRE4YFR050C SLM3Q12093 417 aa3.71□□□□□ -1.82
PRE4YFR050C RAD4P14736 754 aa3.7□□□□□ -1.82
PRE4YFR050C PFF1P38244 976 aa3.7□□□□□ -1.82
PRE4YFR050C DLD3P39976 496 aaKnown RBP3.7□□□□□ -1.82
PRE4YFR050C AAD14P42884 376 aa3.7□□□□□ -1.82
PRE4YFR050C ZDS1P50111 915 aaKnown RBP3.7□□□□□ -1.82
PRE4YFR050C ZDS2P54786 942 aa3.7□□□□□ -1.82
PRE4YFR050C ISU1Q03020 165 aa3.7□□□□□ -1.82
PRE4YFR050C RBA50Q04418 439 aa3.7□□□□□ -1.82
PRE4YFR050C UTP13Q05946 817 aaKnown RBP3.7□□□□□ -1.82
PRE4YFR050C YLR346CQ06139 101 aa3.7□□□□□ -1.82
PRE4YFR050C DAT1P13483 248 aaKnown RBP3.69□□□□□ -1.82
PRE4YFR050C MCM3P24279 971 aaKnown RBP3.69□□□□□ -1.82
PRE4YFR050C UTR2P32623 467 aa3.69□□□□□ -1.82
PRE4YFR050C YGR117CP53270 476 aa3.69□□□□□ -1.82
PRE4YFR050C YPL034WQ03083 165 aa3.69□□□□□ -1.82
PRE4YFR050C YDR444WQ04093 687 aa3.69□□□□□ -1.82
PRE4YFR050C MIP1P15801 1254 aa3.68□□□□□ -1.82
PRE4YFR050C MSM1P22438 575 aa3.68□□□□□ -1.82
PRE4YFR050C SIS2P36024 562 aa3.68□□□□□ -1.82
PRE4YFR050C TBS1P38114 1094 aa3.68□□□□□ -1.82
PRE4YFR050C NUP85P46673 744 aa3.68□□□□□ -1.82
PRE4YFR050C APL6P46682 809 aa3.68□□□□□ -1.82
PRE4YFR050C LSC2P53312 427 aa3.68□□□□□ -1.82
PRE4YFR050C MRX10Q05648 414 aa3.68□□□□□ -1.82
PRE4YFR050C CTI6Q08923 506 aa3.68□□□□□ -1.82
PRE4YFR050C STE6P12866 1290 aa3.67□□□□□ -1.82
PRE4YFR050C ENP1P38333 483 aaKnown RBP3.67□□□□□ -1.82
PRE4YFR050C KTR7P40504 517 aa3.67□□□□□ -1.82
PRE4YFR050C YFL040WP43562 540 aa3.67□□□□□ -1.82
PRE4YFR050C RDS2P19541 446 aaKnown RBP3.66□□□□□ -1.82
PRE4YFR050C CPS1P27614 576 aa3.66□□□□□ -1.82
PRE4YFR050C MSC7P38694 644 aa3.66□□□□□ -1.82
PRE4YFR050C HAL5P38970 855 aaKnown RBP3.66□□□□□ -1.82
PRE4YFR050C STM1P39015 273 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms