RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W IRC8P47046 822 aa8.4□□□□□ -1.06
PDA1YER178W PIP2P52960 996 aa8.4□□□□□ -1.06
PDA1YER178W HXT17P53631 564 aa8.4□□□□□ -1.06
PDA1YER178W PMA1P05030 918 aaKnown RBP8.39□□□□□ -1.07
PDA1YER178W HVG1P0CE11 249 aa8.39□□□□□ -1.07
PDA1YER178W BRN1P38170 754 aa8.39□□□□□ -1.07
PDA1YER178W HDA1P53973 706 aa8.39□□□□□ -1.07
PDA1YER178W PCL8Q08966 492 aa8.39□□□□□ -1.07
PDA1YER178W KEL3Q08979 651 aaPredicted RBP8.39□□□□□ -1.07
PDA1YER178W FPR3P38911 411 aaKnown RBP8.38□□□□□ -1.07
PDA1YER178W HXT13P39924 564 aa8.38□□□□□ -1.07
PDA1YER178W IOC3P43596 787 aa8.38□□□□□ -1.07
PDA1YER178W DUS1P53759 423 aaKnown RBP8.38□□□□□ -1.07
PDA1YER178W TAH18Q12181 623 aa8.38□□□□□ -1.07
PDA1YER178W KIN1P13185 1064 aa8.37□□□□□ -1.07
PDA1YER178W PRO3P32263 286 aaKnown RBP8.37□□□□□ -1.07
PDA1YER178W PCS60P38137 543 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
PDA1YER178W YBL028CP38202 106 aa8.37□□□□□ -1.07
PDA1YER178W OSH3P38713 996 aaKnown RBP8.37□□□□□ -1.07
PDA1YER178W PGA3Q12746 312 aaKnown RBP8.37□□□□□ -1.07
PDA1YER178W NPL4P33755 580 aa8.36□□□□□ -1.07
PDA1YER178W SPT21P35209 758 aa8.36□□□□□ -1.07
PDA1YER178W STM1P39015 273 aaKnown RBP8.36□□□□□ -1.07
PDA1YER178W PTK2P47116 818 aaKnown RBP8.36□□□□□ -1.07
PDA1YER178W YDL124WQ07551 312 aaKnown RBP8.36□□□□□ -1.07
PDA1YER178W MYO1P08964 1928 aa8.36□□□□□ -1.07
PDA1YER178W VAS1P07806 1104 aaKnown RBP8.35□□□□□ -1.07
PDA1YER178W KRS1P15180 591 aaKnown RBP8.35□□□□□ -1.07
PDA1YER178W OPI1P21957 404 aa8.35□□□□□ -1.07
PDA1YER178W GEF1P37020 779 aa8.35□□□□□ -1.07
PDA1YER178W NOP2P40991 618 aaKnown RBP8.35□□□□□ -1.07
PDA1YER178W YPL260WQ08977 551 aa8.35□□□□□ -1.07
PDA1YER178W YDJ1P25491 409 aaKnown RBP8.34□□□□□ -1.07
PDA1YER178W TIF4631P39935 952 aaKnown RBP8.34□□□□□ -1.07
PDA1YER178W ACA1P39970 489 aa8.34□□□□□ -1.07
PDA1YER178W VID27P40157 782 aa8.34□□□□□ -1.07
PDA1YER178W RRT6P53117 311 aaPredicted RBP8.34□□□□□ -1.07
PDA1YER178W GCR2Q01722 534 aa8.34□□□□□ -1.07
PDA1YER178W ECM16Q04217 1267 aaKnown RBP8.34□□□□□ -1.07
PDA1YER178W GAL2P13181 574 aa8.33□□□□□ -1.08
PDA1YER178W PRE8P23639 250 aa8.33□□□□□ -1.08
PDA1YER178W CHS3P29465 1165 aa8.33□□□□□ -1.08
PDA1YER178W MOT2P34909 587 aaKnown RBP8.33□□□□□ -1.08
PDA1YER178W RTS1P38903 757 aa8.33□□□□□ -1.08
PDA1YER178W MSH4P40965 878 aaPredicted RBP8.33□□□□□ -1.08
PDA1YER178W RPS15Q01855 142 aaKnown RBP8.33□□□□□ -1.08
PDA1YER178W GIN4Q12263 1142 aa8.33□□□□□ -1.08
PDA1YER178W RAD61Q99359 647 aa8.33□□□□□ -1.08
PDA1YER178W FBP1P09201 348 aa8.32□□□□□ -1.08
PDA1YER178W DLD1P32891 587 aa8.32□□□□□ -1.08
PDA1YER178W MYO3P36006 1272 aa8.32□□□□□ -1.08
PDA1YER178W MET1P36150 593 aa8.32□□□□□ -1.08
PDA1YER178W TPS3P38426 1054 aaKnown RBP8.32□□□□□ -1.08
PDA1YER178W SKG3Q06315 1026 aa8.32□□□□□ -1.08
PDA1YER178W SPB4P25808 606 aaPredicted RBP8.31□□□□□ -1.08
PDA1YER178W CIC1P38779 376 aaKnown RBP8.31□□□□□ -1.08
PDA1YER178W UFD2P54860 961 aa8.31□□□□□ -1.08
PDA1YER178W CST9Q06032 482 aa8.31□□□□□ -1.08
PDA1YER178W LAP2Q10740 671 aa8.31□□□□□ -1.08
PDA1YER178W MPH3P0CE00 602 aa8.3□□□□□ -1.08
PDA1YER178W SAM2P19358 384 aaKnown RBP8.3□□□□□ -1.08
PDA1YER178W ACE2P21192 770 aa8.3□□□□□ -1.08
PDA1YER178W SRM1P21827 482 aa8.3□□□□□ -1.08
PDA1YER178W IXR1P33417 597 aa8.3□□□□□ -1.08
PDA1YER178W CST26P38226 397 aa8.3□□□□□ -1.08
PDA1YER178W BSD2P38356 321 aa8.3□□□□□ -1.08
PDA1YER178W AIM9P40053 627 aaKnown RBP8.3□□□□□ -1.08
PDA1YER178W ECM23Q02710 187 aa8.3□□□□□ -1.08
PDA1YER178W ECM29P38737 1868 aa8.3□□□□□ -1.08
PDA1YER178W ANP1P32629 500 aa8.29□□□□□ -1.08
PDA1YER178W ASH1P34233 588 aa8.29□□□□□ -1.08
PDA1YER178W APE3P37302 537 aaKnown RBP8.29□□□□□ -1.08
PDA1YER178W SLN1P39928 1220 aaPredicted RBP8.29□□□□□ -1.08
PDA1YER178W CSM2P40465 213 aa8.29□□□□□ -1.08
PDA1YER178W FPR4Q06205 392 aaPredicted RBP8.29□□□□□ -1.08
PDA1YER178W TUS1Q06412 1307 aa8.29□□□□□ -1.08
PDA1YER178W TRL1P09880 827 aaKnown RBP8.28□□□□□ -1.08
PDA1YER178W RIT1P23796 513 aa8.28□□□□□ -1.08
PDA1YER178W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
PDA1YER178W YJL007CP47080 104 aa8.28□□□□□ -1.08
PDA1YER178W ENP2P48234 707 aaKnown RBP8.28□□□□□ -1.08
PDA1YER178W RBA50Q04418 439 aa8.28□□□□□ -1.08
PDA1YER178W MRD1Q06106 887 aaKnown RBP8.28□□□□□ -1.08
PDA1YER178W SUE1Q06524 206 aa8.28□□□□□ -1.08
PDA1YER178W TIF6Q12522 245 aaKnown RBP8.28□□□□□ -1.08
PDA1YER178W IMP2'P32351 346 aa8.27□□□□□ -1.09
PDA1YER178W RER2P35196 286 aa8.27□□□□□ -1.09
PDA1YER178W RRP8P38961 392 aaKnown RBP8.27□□□□□ -1.09
PDA1YER178W JIP4Q03361 876 aa8.27□□□□□ -1.09
PDA1YER178W SRP54P20424 541 aaKnown RBP8.26□□□□□ -1.09
PDA1YER178W CRG1P38892 291 aaRIP-Chip data8.26□□□□□ -1.09not detected
PDA1YER178W SNU71P53207 620 aaKnown RBP8.26□□□□□ -1.09
PDA1YER178W YML037CQ03703 340 aa8.26□□□□□ -1.09
PDA1YER178W MYO5Q04439 1219 aaKnown RBP8.26□□□□□ -1.09
PDA1YER178W TFC6Q06339 672 aa8.26□□□□□ -1.09
PDA1YER178W SSF2Q12153 453 aaPredicted RBP8.26□□□□□ -1.09
PDA1YER178W RPC31P17890 251 aa8.25□□□□□ -1.09
PDA1YER178W PEP3P27801 918 aa8.25□□□□□ -1.09
PDA1YER178W OCT1P35999 772 aa8.25□□□□□ -1.09
PDA1YER178W SPN1Q06505 410 aaPredicted RBP8.25□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms