RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C UGA4P32837 571 aa1.83□□□□□ -2.12
SWI4YER111C AAD14P42884 376 aa1.83□□□□□ -2.12
SWI4YER111C RGD2P43556 714 aa1.83□□□□□ -2.12
SWI4YER111C IOC3P43596 787 aa1.83□□□□□ -2.12
SWI4YER111C YJL181WP46987 611 aa1.83□□□□□ -2.12
SWI4YER111C JJJ2P46997 583 aa1.83□□□□□ -2.12
SWI4YER111C MET32Q12041 191 aa1.83□□□□□ -2.12
SWI4YER111C FLP1P03870 423 aa1.82□□□□□ -2.12
SWI4YER111C AMS1P22855 1083 aa1.82□□□□□ -2.12
SWI4YER111C TSR4P25040 408 aa1.82□□□□□ -2.12
SWI4YER111C ULP1Q02724 621 aa1.82□□□□□ -2.12
SWI4YER111C SSF2Q12153 453 aaPredicted RBP1.82□□□□□ -2.12
SWI4YER111C MYO2P19524 1574 aaKnown RBP1.82□□□□□ -2.12
SWI4YER111C BCK2P33306 851 aa1.82□□□□□ -2.12
SWI4YER111C KTR2P33550 425 aa1.82□□□□□ -2.12
SWI4YER111C PBP2P38151 413 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
SWI4YER111C XKS1P42826 600 aa1.82□□□□□ -2.12
SWI4YER111C YJL049WP47048 450 aa1.82□□□□□ -2.12
SWI4YER111C YJR115WP47152 169 aa1.82□□□□□ -2.12
SWI4YER111C ALG12P53730 551 aa1.82□□□□□ -2.12
SWI4YER111C NAN1Q02931 896 aaKnown RBP1.82□□□□□ -2.12
SWI4YER111C UTP4Q06679 776 aaKnown RBP1.82□□□□□ -2.12
SWI4YER111C OPI10Q08202 246 aa1.82□□□□□ -2.12
SWI4YER111C OSH2Q12451 1283 aa1.82□□□□□ -2.12
SWI4YER111C PEP1P32319 1579 aa1.82□□□□□ -2.12
SWI4YER111C RAS1P01119 309 aa1.81□□□□□ -2.12
SWI4YER111C DED1P06634 604 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C NAB2P32505 525 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SWI4YER111C ATG14P38270 344 aa1.81□□□□□ -2.12
SWI4YER111C SSN3P39073 555 aa1.81□□□□□ -2.12
SWI4YER111C GCR1P07261 785 aa1.81□□□□□ -2.12
SWI4YER111C CDC4P07834 779 aa1.81□□□□□ -2.12
SWI4YER111C SHM1P37292 490 aaPredicted RBP1.81□□□□□ -2.12
SWI4YER111C NUP82P40368 713 aa1.81□□□□□ -2.12
SWI4YER111C AIR1P40507 360 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C PTK2P47116 818 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C TYW3P53177 273 aa1.81□□□□□ -2.12
SWI4YER111C LSC2P53312 427 aa1.81□□□□□ -2.12
SWI4YER111C CUS1Q02554 436 aaPredicted RBP1.81□□□□□ -2.12
SWI4YER111C ADI1Q03677 179 aa1.81□□□□□ -2.12
SWI4YER111C POB3Q04636 552 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C YOR296WQ08748 1289 aa1.81□□□□□ -2.12
SWI4YER111C RTT10Q08924 1013 aa1.81□□□□□ -2.12
SWI4YER111C TCB3Q03640 1545 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C CDC34P14682 295 aa1.81□□□□□ -2.12
SWI4YER111C PDC6P26263 563 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C THI4P32318 326 aa1.81□□□□□ -2.12
SWI4YER111C PEX28P38848 579 aa1.81□□□□□ -2.12
SWI4YER111C FPR3P38911 411 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C MNN1P39106 762 aa1.81□□□□□ -2.12
SWI4YER111C RVS167P39743 482 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C MSN5P52918 1224 aa1.81□□□□□ -2.12
SWI4YER111C NUT1P53114 1132 aa1.81□□□□□ -2.12
SWI4YER111C YGR125WP53273 1036 aa1.81□□□□□ -2.12
SWI4YER111C YPL109CQ02981 657 aa1.81□□□□□ -2.12
SWI4YER111C SPO20Q04359 397 aa1.81□□□□□ -2.12
SWI4YER111C EMG1Q06287 252 aaKnown RBP1.81□□□□□ -2.12
SWI4YER111C PSH1Q12161 406 aa1.81□□□□□ -2.12
SWI4YER111C YGR161W-CQ3E744 92 aa1.81□□□□□ -2.12
SWI4YER111C PYC2P32327 1180 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C MRPL16P38064 232 aa1.8□□□□□ -2.12
SWI4YER111C NCL1P38205 684 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C PMT7Q06644 662 aa1.8□□□□□ -2.12
SWI4YER111C SPO75Q07798 868 aa1.8□□□□□ -2.12
SWI4YER111C CCP1P00431 361 aa1.8□□□□□ -2.12
SWI4YER111C RPS31P05759 152 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C PHO8P11491 566 aa1.8□□□□□ -2.12
SWI4YER111C ARE1P25628 610 aa1.8□□□□□ -2.12
SWI4YER111C MOT2P34909 587 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C YKL077WP36081 392 aa1.8□□□□□ -2.12
SWI4YER111C YIL165CP40446 119 aa1.8□□□□□ -2.12
SWI4YER111C KRI1P42846 591 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C PPT1P53043 513 aa1.8□□□□□ -2.12
SWI4YER111C YNR040WP53736 256 aa1.8□□□□□ -2.12
SWI4YER111C BDF2Q07442 638 aa1.8□□□□□ -2.12
SWI4YER111C TMA46Q12000 345 aaKnown RBP1.8□□□□□ -2.12
SWI4YER111C TCB1Q12466 1186 aa1.8□□□□□ -2.12
SWI4YER111C RGP1P16664 663 aa1.79□□□□□ -2.12
SWI4YER111C AFT1P22149 690 aa1.79□□□□□ -2.12
SWI4YER111C XDJ1P39102 459 aa1.79□□□□□ -2.12
SWI4YER111C PIC2P40035 300 aa1.79□□□□□ -2.12
SWI4YER111C YNR063WP53749 607 aa1.79□□□□□ -2.12
SWI4YER111C YLR225CQ05948 407 aaKnown RBP1.79□□□□□ -2.12
SWI4YER111C ABD1P32783 436 aaPredicted RBP1.79□□□□□ -2.12
SWI4YER111C YKL069WP36088 180 aa1.79□□□□□ -2.12
SWI4YER111C YBR184WP38299 523 aa1.79□□□□□ -2.12
SWI4YER111C SHU2P38957 223 aa1.79□□□□□ -2.12
SWI4YER111C SPF1P39986 1215 aaKnown RBP1.79□□□□□ -2.12
SWI4YER111C NUP85P46673 744 aa1.79□□□□□ -2.12
SWI4YER111C YJR098CP47139 656 aa1.79□□□□□ -2.12
SWI4YER111C RTS3P53289 263 aa1.79□□□□□ -2.12
SWI4YER111C DOS2P54858 310 aa1.79□□□□□ -2.12
SWI4YER111C YLR346CQ06139 101 aa1.79□□□□□ -2.12
SWI4YER111C LEU1P07264 779 aaKnown RBP1.79□□□□□ -2.12
SWI4YER111C GAL11P19659 1081 aa1.79□□□□□ -2.12
SWI4YER111C TIM23P32897 222 aa1.79□□□□□ -2.12
SWI4YER111C DUR3P33413 735 aa1.79□□□□□ -2.12
SWI4YER111C APM2P38700 605 aa1.79□□□□□ -2.12
SWI4YER111C YJR008WP47085 338 aa1.79□□□□□ -2.12
SWI4YER111C MSB3P48566 633 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms