RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W GIP1P38229 639 aa6.64□□□□□ -1.35
UBC6YER100W MSN5P52918 1224 aa6.64□□□□□ -1.35
UBC6YER100W RTS3P53289 263 aa6.64□□□□□ -1.35
UBC6YER100W TDA5Q06417 326 aaKnown RBP6.64□□□□□ -1.35
UBC6YER100W YOR296WQ08748 1289 aa6.64□□□□□ -1.35
UBC6YER100W MET6P05694 767 aaKnown RBP6.63□□□□□ -1.35
UBC6YER100W RAD4P14736 754 aa6.63□□□□□ -1.35
UBC6YER100W RPC31P17890 251 aa6.63□□□□□ -1.35
UBC6YER100W MCM5P29496 775 aaKnown RBP6.63□□□□□ -1.35
UBC6YER100W MNN1P39106 762 aa6.63□□□□□ -1.35
UBC6YER100W NUP82P40368 713 aa6.63□□□□□ -1.35
UBC6YER100W ULP1Q02724 621 aa6.63□□□□□ -1.35
UBC6YER100W TMA46Q12000 345 aaKnown RBP6.63□□□□□ -1.35
UBC6YER100W SSB1P11484 613 aaKnown RBP6.62□□□□□ -1.35
UBC6YER100W TSR4P25040 408 aa6.62□□□□□ -1.35
UBC6YER100W PIC2P40035 300 aa6.62□□□□□ -1.35
UBC6YER100W SSB2P40150 613 aaKnown RBP6.62□□□□□ -1.35
UBC6YER100W YGR161W-CQ3E744 92 aa6.62□□□□□ -1.35
UBC6YER100W RPS31P05759 152 aaKnown RBP6.61□□□□□ -1.35
UBC6YER100W TAF13P11747 167 aa6.61□□□□□ -1.35
UBC6YER100W YHR020WP38708 688 aaKnown RBP6.61□□□□□ -1.35
UBC6YER100W SSN3P39073 555 aa6.61□□□□□ -1.35
UBC6YER100W RVS167P39743 482 aaKnown RBP6.61□□□□□ -1.35
UBC6YER100W NUG1P40010 520 aaKnown RBP6.61□□□□□ -1.35
UBC6YER100W YTA6P40328 754 aa6.61□□□□□ -1.35
UBC6YER100W SAP155P43612 1002 aa6.61□□□□□ -1.35
UBC6YER100W JJJ2P46997 583 aa6.61□□□□□ -1.35
UBC6YER100W TIM54P47045 478 aa6.61□□□□□ -1.35
UBC6YER100W YJR115WP47152 169 aa6.61□□□□□ -1.35
UBC6YER100W NUT1P53114 1132 aa6.61□□□□□ -1.35
UBC6YER100W CTR9P89105 1077 aa6.61□□□□□ -1.35
UBC6YER100W FRK1Q03002 865 aaPredicted RBP6.61□□□□□ -1.35
UBC6YER100W HED1Q03937 162 aa6.61□□□□□ -1.35
UBC6YER100W YLR125WQ12138 136 aa6.61□□□□□ -1.35
UBC6YER100W GRX4P32642 244 aa6.6□□□□□ -1.35
UBC6YER100W ALA1P40825 983 aaKnown RBP6.6□□□□□ -1.35
UBC6YER100W KRI1P42846 591 aaKnown RBP6.6□□□□□ -1.35
UBC6YER100W COBP00163 385 aa6.59□□□□□ -1.35
UBC6YER100W GCR1P07261 785 aa6.59□□□□□ -1.35
UBC6YER100W PHO8P11491 566 aa6.59□□□□□ -1.35
UBC6YER100W AIM46P38885 310 aa6.59□□□□□ -1.35
UBC6YER100W YJR008WP47085 338 aa6.59□□□□□ -1.35
UBC6YER100W TYW3P53177 273 aa6.59□□□□□ -1.35
UBC6YER100W PRI2P20457 528 aa6.58□□□□□ -1.36
UBC6YER100W UGA4P32837 571 aa6.58□□□□□ -1.36
UBC6YER100W YKL069WP36088 180 aa6.58□□□□□ -1.36
UBC6YER100W BSD2P38356 321 aa6.58□□□□□ -1.36
UBC6YER100W MSH4P40965 878 aaPredicted RBP6.58□□□□□ -1.36
UBC6YER100W GNP1P48813 663 aa6.58□□□□□ -1.36
UBC6YER100W SKP1P52286 194 aa6.58□□□□□ -1.36
UBC6YER100W KRE33P53914 1056 aaKnown RBP6.58□□□□□ -1.36
UBC6YER100W PMT7Q06644 662 aa6.58□□□□□ -1.36
UBC6YER100W FAL1Q12099 399 aaKnown RBP6.58□□□□□ -1.36
UBC6YER100W CCP1P00431 361 aa6.57□□□□□ -1.36
UBC6YER100W TIM23P32897 222 aa6.57□□□□□ -1.36
UBC6YER100W SHM1P37292 490 aaPredicted RBP6.57□□□□□ -1.36
UBC6YER100W ECM2P38241 364 aaKnown RBP6.57□□□□□ -1.36
UBC6YER100W GGA2P38817 585 aaKnown RBP6.57□□□□□ -1.36
UBC6YER100W NOP2P40991 618 aaKnown RBP6.57□□□□□ -1.36
UBC6YER100W ENT3P47160 408 aa6.57□□□□□ -1.36
UBC6YER100W YJR142WP47173 342 aa6.57□□□□□ -1.36
UBC6YER100W EEB1Q02891 456 aa6.57□□□□□ -1.36
UBC6YER100W EMG1Q06287 252 aaKnown RBP6.57□□□□□ -1.36
UBC6YER100W SPO75Q07798 868 aa6.57□□□□□ -1.36
UBC6YER100W FLC1Q08967 793 aa6.57□□□□□ -1.36
UBC6YER100W LEU1P07264 779 aaKnown RBP6.56□□□□□ -1.36
UBC6YER100W SEC23P15303 768 aaKnown RBP6.56□□□□□ -1.36
UBC6YER100W AGP1P25376 633 aa6.56□□□□□ -1.36
UBC6YER100W RAD27P26793 382 aa6.56□□□□□ -1.36
UBC6YER100W IRE1P32361 1115 aa6.56□□□□□ -1.36
UBC6YER100W UBP12P39538 1254 aa6.56□□□□□ -1.36
UBC6YER100W VTC4P47075 721 aa6.56□□□□□ -1.36
UBC6YER100W SHE9Q04172 456 aa6.56□□□□□ -1.36
UBC6YER100W AHP1P38013 176 aaKnown RBP6.55□□□□□ -1.36
UBC6YER100W RSP5P39940 809 aaKnown RBP6.55□□□□□ -1.36
UBC6YER100W YIL165CP40446 119 aa6.55□□□□□ -1.36
UBC6YER100W NOG1Q02892 647 aaKnown RBP6.55□□□□□ -1.36
UBC6YER100W GAL11P19659 1081 aa6.54□□□□□ -1.36
UBC6YER100W PRP5P21372 849 aaPredicted RBP6.54□□□□□ -1.36
UBC6YER100W PYC2P32327 1180 aaKnown RBP6.54□□□□□ -1.36
UBC6YER100W NAB2P32505 525 aaKnown RBP RIP-Chip data6.54□□□□□ -1.36not detected
UBC6YER100W SLA1P32790 1244 aa6.54□□□□□ -1.36
UBC6YER100W DUR3P33413 735 aa6.54□□□□□ -1.36
UBC6YER100W MRP8P35719 219 aa6.54□□□□□ -1.36
UBC6YER100W MON1P53129 644 aa6.54□□□□□ -1.36
UBC6YER100W ARG82P07250 355 aa6.53□□□□□ -1.36
UBC6YER100W TRK1P12685 1235 aa6.53□□□□□ -1.36
UBC6YER100W BAS1P22035 811 aa6.53□□□□□ -1.36
UBC6YER100W SBA1P28707 216 aaKnown RBP6.53□□□□□ -1.36
UBC6YER100W DAL1P32375 460 aa6.53□□□□□ -1.36
UBC6YER100W SQT1P35184 431 aa6.53□□□□□ -1.36
UBC6YER100W RIM11P38615 370 aa6.53□□□□□ -1.36
UBC6YER100W XKS1P42826 600 aa6.53□□□□□ -1.36
UBC6YER100W AAD14P42884 376 aa6.53□□□□□ -1.36
UBC6YER100W YPL062WQ02781 134 aa6.53□□□□□ -1.36
UBC6YER100W MRL1Q06815 381 aa6.53□□□□□ -1.36
UBC6YER100W OSH2Q12451 1283 aa6.53□□□□□ -1.36
UBC6YER100W PDC6P26263 563 aaKnown RBP6.52□□□□□ -1.37
UBC6YER100W THI4P32318 326 aa6.52□□□□□ -1.37
UBC6YER100W STE5P32917 917 aa6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms