RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W ERR2P0CX11 437 aa6.64□□□□□ -1.35
VMS1YDR049W SIT4P20604 311 aa6.64□□□□□ -1.35
VMS1YDR049W SFP1P32432 683 aa6.64□□□□□ -1.35
VMS1YDR049W ABZ1P37254 787 aaPredicted RBP6.64□□□□□ -1.35
VMS1YDR049W PEA2P40091 420 aa6.64□□□□□ -1.35
VMS1YDR049W ROM1P53046 1155 aa6.64□□□□□ -1.35
VMS1YDR049W SPC105P53148 917 aa6.64□□□□□ -1.35
VMS1YDR049W TRS120Q04183 1289 aa6.64□□□□□ -1.35
VMS1YDR049W RRP9Q06506 573 aaKnown RBP6.64□□□□□ -1.35
VMS1YDR049W CYC8P14922 966 aa6.64□□□□□ -1.35
VMS1YDR049W URA1P28272 314 aaPredicted RBP6.64□□□□□ -1.35
VMS1YDR049W HEL2Q05580 639 aaKnown RBP6.64□□□□□ -1.35
VMS1YDR049W TDA5Q06417 326 aaKnown RBP6.64□□□□□ -1.35
VMS1YDR049W ATG13Q06628 738 aa6.64□□□□□ -1.35
VMS1YDR049W TSR2Q06672 205 aaKnown RBP6.64□□□□□ -1.35
VMS1YDR049W SST2P11972 698 aaKnown RBP6.63□□□□□ -1.35
VMS1YDR049W MSM1P22438 575 aa6.63□□□□□ -1.35
VMS1YDR049W VPH1P32563 840 aaKnown RBP6.63□□□□□ -1.35
VMS1YDR049W TRZ1P36159 838 aaPredicted RBP6.63□□□□□ -1.35
VMS1YDR049W RSP5P39940 809 aaKnown RBP6.63□□□□□ -1.35
VMS1YDR049W HOL1P53389 586 aa6.63□□□□□ -1.35
VMS1YDR049W SPC19Q03954 165 aa6.63□□□□□ -1.35
VMS1YDR049W VTI1Q04338 217 aa6.63□□□□□ -1.35
VMS1YDR049W NTG2Q08214 380 aa6.63□□□□□ -1.35
VMS1YDR049W EXO84P38261 753 aa6.62□□□□□ -1.35
VMS1YDR049W SPF1P39986 1215 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W MVP1P40959 511 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W TYW3P53177 273 aa6.62□□□□□ -1.35
VMS1YDR049W YGR016WP53209 190 aa6.62□□□□□ -1.35
VMS1YDR049W YGR122WP53272 402 aa6.62□□□□□ -1.35
VMS1YDR049W RCF1Q03713 159 aa6.62□□□□□ -1.35
VMS1YDR049W APL5Q08951 932 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W SRF1Q12516 437 aa6.62□□□□□ -1.35
VMS1YDR049W YOL087CQ99247 1116 aa6.62□□□□□ -1.35
VMS1YDR049W KRR1P25586 316 aaPredicted RBP6.62□□□□□ -1.35
VMS1YDR049W GCD6P32501 712 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W STE5P32917 917 aa6.62□□□□□ -1.35
VMS1YDR049W RXT2P38255 430 aa6.62□□□□□ -1.35
VMS1YDR049W SAM37P50110 327 aa6.62□□□□□ -1.35
VMS1YDR049W ACS2P52910 683 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W NOP58Q12499 511 aaKnown RBP6.62□□□□□ -1.35
VMS1YDR049W PRI2P20457 528 aa6.61□□□□□ -1.35
VMS1YDR049W RKM3P38222 552 aa6.61□□□□□ -1.35
VMS1YDR049W VTC2P43585 828 aa6.61□□□□□ -1.35
VMS1YDR049W PML39Q03760 334 aa6.61□□□□□ -1.35
VMS1YDR049W CEX1Q12453 761 aa6.61□□□□□ -1.35
VMS1YDR049W LSO1Q3E827 93 aa6.61□□□□□ -1.35
VMS1YDR049W MPD2Q99316 277 aa6.61□□□□□ -1.35
VMS1YDR049W CYT1P07143 309 aa6.6□□□□□ -1.35
VMS1YDR049W RNA1P11745 407 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W STO1P34160 861 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W PTH2P34222 208 aa6.6□□□□□ -1.35
VMS1YDR049W PEX5P35056 612 aa6.6□□□□□ -1.35
VMS1YDR049W YHR218WP38899 603 aa6.6□□□□□ -1.35
VMS1YDR049W CAJ1P39101 391 aa6.6□□□□□ -1.35
VMS1YDR049W SPR3P41901 512 aa6.6□□□□□ -1.35
VMS1YDR049W FAA4P47912 694 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W HLJ1P48353 224 aa6.6□□□□□ -1.35
VMS1YDR049W PIP2P52960 996 aa6.6□□□□□ -1.35
VMS1YDR049W ALO1P54783 526 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W ELP4Q02884 456 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W CLF1Q12309 687 aaPredicted RBP6.6□□□□□ -1.35
VMS1YDR049W TPM1P17536 199 aaKnown RBP6.6□□□□□ -1.35
VMS1YDR049W ISF1P32488 338 aa6.6□□□□□ -1.35
VMS1YDR049W VRP1P37370 817 aa6.6□□□□□ -1.35
VMS1YDR049W PMT3P47190 753 aa6.6□□□□□ -1.35
VMS1YDR049W COG6P53959 839 aa6.6□□□□□ -1.35
VMS1YDR049W ERO1Q03103 563 aa6.6□□□□□ -1.35
VMS1YDR049W OPI10Q08202 246 aa6.6□□□□□ -1.35
VMS1YDR049W CFT2Q12102 859 aaPredicted RBP6.6□□□□□ -1.35
VMS1YDR049W ECM32P32644 1121 aaKnown RBP6.59□□□□□ -1.35
VMS1YDR049W YKL050CP35736 922 aa6.59□□□□□ -1.35
VMS1YDR049W XDJ1P39102 459 aa6.59□□□□□ -1.35
VMS1YDR049W ESL1P40456 1118 aa6.59□□□□□ -1.35
VMS1YDR049W ALA1P40825 983 aaKnown RBP6.59□□□□□ -1.35
VMS1YDR049W SAP185P40856 1058 aa6.59□□□□□ -1.35
VMS1YDR049W ATH1P48016 1211 aa6.59□□□□□ -1.35
VMS1YDR049W YNL034WP53963 612 aa6.59□□□□□ -1.35
VMS1YDR049W YNL018CP53976 612 aa6.59□□□□□ -1.35
VMS1YDR049W MEF1P25039 761 aa6.58□□□□□ -1.36
VMS1YDR049W AAD3P25612 363 aa6.58□□□□□ -1.36
VMS1YDR049W BNA1P47096 177 aa6.58□□□□□ -1.36
VMS1YDR049W UBA2P52488 636 aa6.58□□□□□ -1.36
VMS1YDR049W YML131WQ03102 365 aa6.58□□□□□ -1.36
VMS1YDR049W REH1Q06709 432 aa6.58□□□□□ -1.36
VMS1YDR049W PSR2Q07949 397 aa6.58□□□□□ -1.36
VMS1YDR049W SGT2Q12118 346 aaKnown RBP6.58□□□□□ -1.36
VMS1YDR049W TOM70P07213 617 aaKnown RBP6.58□□□□□ -1.36
VMS1YDR049W YBR071WP38243 211 aa6.58□□□□□ -1.36
VMS1YDR049W MNT3P40549 630 aa6.58□□□□□ -1.36
VMS1YDR049W PEX14P53112 341 aa6.58□□□□□ -1.36
VMS1YDR049W YGR273CP53329 174 aa6.58□□□□□ -1.36
VMS1YDR049W BUL2Q03758 920 aaKnown RBP6.58□□□□□ -1.36
VMS1YDR049W NUP145P49687 1317 aa6.57□□□□□ -1.36
VMS1YDR049W NPR1P22211 790 aa6.57□□□□□ -1.36
VMS1YDR049W SMY2P32909 740 aaKnown RBP6.57□□□□□ -1.36
VMS1YDR049W VPS35P34110 944 aa6.57□□□□□ -1.36
VMS1YDR049W YGR125WP53273 1036 aa6.57□□□□□ -1.36
VMS1YDR049W BTN2P53286 410 aa6.57□□□□□ -1.36
VMS1YDR049W MET14Q02196 202 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms