RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPP1B	YDL130W	GIN4	Q12263	1142 aa		18.51	■□□□□ 0.55
RPP1B	YDL130W	CST9	Q06032	482 aa		18.49	■□□□□ 0.55
RPP1B	YDL130W	BBC1	P47068	1157 aa		18.48	■□□□□ 0.55
RPP1B	YDL130W	PEX29	Q03370	554 aa		18.48	■□□□□ 0.55
RPP1B	YDL130W	YPL260W	Q08977	551 aa		18.48	■□□□□ 0.55
RPP1B	YDL130W	TAH18	Q12181	623 aa		18.48	■□□□□ 0.55
RPP1B	YDL130W	GSC2	P40989	1895 aa		18.48	■□□□□ 0.55
RPP1B	YDL130W	STM1	P39015	273 aa	Known RBP	18.47	■□□□□ 0.55
RPP1B	YDL130W	PPM2	Q08282	695 aa		18.47	■□□□□ 0.55
RPP1B	YDL130W	KIN1	P13185	1064 aa		18.46	■□□□□ 0.55
RPP1B	YDL130W	PKH3	Q03306	898 aa	Predicted RBP	18.46	■□□□□ 0.55
RPP1B	YDL130W	YDL124W	Q07551	312 aa	Known RBP	18.46	■□□□□ 0.55
RPP1B	YDL130W	SNU71	P53207	620 aa	Known RBP	18.45	■□□□□ 0.54
RPP1B	YDL130W	RBA50	Q04418	439 aa		18.45	■□□□□ 0.54
RPP1B	YDL130W	SRF1	Q12516	437 aa		18.45	■□□□□ 0.54
RPP1B	YDL130W	OPI1	P21957	404 aa		18.44	■□□□□ 0.54
RPP1B	YDL130W	APE3	P37302	537 aa	Known RBP	18.44	■□□□□ 0.54
RPP1B	YDL130W	RSC30	P38781	883 aa		18.44	■□□□□ 0.54
RPP1B	YDL130W	RAD50	P12753	1312 aa		18.44	■□□□□ 0.54
RPP1B	YDL130W	TUB2	P02557	457 aa	Known RBP	18.43	■□□□□ 0.54
RPP1B	YDL130W	SPT21	P35209	758 aa		18.43	■□□□□ 0.54
RPP1B	YDL130W	ACA1	P39970	489 aa		18.43	■□□□□ 0.54
RPP1B	YDL130W	LAM4	P38800	1345 aa		18.43	■□□□□ 0.54
RPP1B	YDL130W	VAS1	P07806	1104 aa	Known RBP	18.42	■□□□□ 0.54
RPP1B	YDL130W	RRP8	P38961	392 aa	Known RBP	18.42	■□□□□ 0.54
RPP1B	YDL130W	SLN1	P39928	1220 aa	Predicted RBP	18.42	■□□□□ 0.54
RPP1B	YDL130W	RIM20	Q12033	661 aa		18.41	■□□□□ 0.54
RPP1B	YDL130W	MPH3	P0CE00	602 aa		18.4	■□□□□ 0.54
RPP1B	YDL130W	CST26	P38226	397 aa		18.4	■□□□□ 0.54
RPP1B	YDL130W	RTS1	P38903	757 aa		18.4	■□□□□ 0.54
RPP1B	YDL130W	JIP4	Q03361	876 aa		18.4	■□□□□ 0.54
RPP1B	YDL130W	COQ1	P18900	473 aa		18.39	■□□□□ 0.53
RPP1B	YDL130W	MOT2	P34909	587 aa	Known RBP	18.39	■□□□□ 0.53
RPP1B	YDL130W	MRD1	Q06106	887 aa	Known RBP	18.39	■□□□□ 0.53
RPP1B	YDL130W	PRE8	P23639	250 aa		18.38	■□□□□ 0.53
RPP1B	YDL130W	OCT1	P35999	772 aa		18.38	■□□□□ 0.53
RPP1B	YDL130W	MET1	P36150	593 aa		18.38	■□□□□ 0.53
RPP1B	YDL130W	FPR4	Q06205	392 aa	Predicted RBP	18.36	■□□□□ 0.53
RPP1B	YDL130W	LAP2	Q10740	671 aa		18.36	■□□□□ 0.53
RPP1B	YDL130W	SRM1	P21827	482 aa		18.35	■□□□□ 0.53
RPP1B	YDL130W	YHL050C	P38721	697 aa		18.35	■□□□□ 0.53
RPP1B	YDL130W	VID27	P40157	782 aa		18.35	■□□□□ 0.53
RPP1B	YDL130W	ASH1	P34233	588 aa		18.34	■□□□□ 0.53
RPP1B	YDL130W	RAD61	Q99359	647 aa		18.34	■□□□□ 0.53
RPP1B	YDL130W	CHO2	P05374	869 aa	Known RBP	18.33	■□□□□ 0.52
RPP1B	YDL130W	AAP1	P37898	856 aa	Known RBP	18.32	■□□□□ 0.52
RPP1B	YDL130W	LYS14	P40971	790 aa		18.32	■□□□□ 0.52
RPP1B	YDL130W	NET1	P47035	1189 aa		18.31	■□□□□ 0.52
RPP1B	YDL130W	NCS6	P53088	359 aa		18.31	■□□□□ 0.52
RPP1B	YDL130W	RPS15	Q01855	142 aa	Known RBP	18.31	■□□□□ 0.52
RPP1B	YDL130W	SUB2	Q07478	446 aa	Known RBP	18.31	■□□□□ 0.52
RPP1B	YDL130W	SSF2	Q12153	453 aa	Predicted RBP	18.31	■□□□□ 0.52
RPP1B	YDL130W	SPR3	P41901	512 aa		18.3	■□□□□ 0.52
RPP1B	YDL130W	UFD2	P54860	961 aa		18.3	■□□□□ 0.52
RPP1B	YDL130W	FBP1	P09201	348 aa		18.29	■□□□□ 0.52
RPP1B	YDL130W	YDJ1	P25491	409 aa	Known RBP	18.29	■□□□□ 0.52
RPP1B	YDL130W	TIF4631	P39935	952 aa	Known RBP	18.29	■□□□□ 0.52
RPP1B	YDL130W	VAB2	P40003	282 aa		18.29	■□□□□ 0.52
RPP1B	YDL130W	SKG3	Q06315	1026 aa		18.29	■□□□□ 0.52
RPP1B	YDL130W	ERG12	P07277	443 aa		18.28	■□□□□ 0.52
RPP1B	YDL130W	MCD4	P36051	919 aa		18.28	■□□□□ 0.52
RPP1B	YDL130W	KRS1	P15180	591 aa	Known RBP	18.27	■□□□□ 0.52
RPP1B	YDL130W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	18.27	■□□□□ 0.52	not detected
RPP1B	YDL130W	BRN1	P38170	754 aa		18.27	■□□□□ 0.52
RPP1B	YDL130W	VPS8	P39702	1274 aa		18.27	■□□□□ 0.52
RPP1B	YDL130W	SGD1	Q06132	899 aa		18.26	■□□□□ 0.51
RPP1B	YDL130W	IXR1	P33417	597 aa		18.25	■□□□□ 0.51
RPP1B	YDL130W	ERG7	P38604	731 aa		18.25	■□□□□ 0.51
RPP1B	YDL130W	CFT2	Q12102	859 aa	Predicted RBP	18.25	■□□□□ 0.51
RPP1B	YDL130W	TPM1	P17536	199 aa	Known RBP	18.24	■□□□□ 0.51
RPP1B	YDL130W	CHS3	P29465	1165 aa		18.24	■□□□□ 0.51
RPP1B	YDL130W	YJL007C	P47080	104 aa		18.24	■□□□□ 0.51
RPP1B	YDL130W	YLR225C	Q05948	407 aa	Known RBP	18.24	■□□□□ 0.51
RPP1B	YDL130W	GCR2	Q01722	534 aa		18.23	■□□□□ 0.51
RPP1B	YDL130W	SPN1	Q06505	410 aa	Predicted RBP	18.23	■□□□□ 0.51
RPP1B	YDL130W	SPB4	P25808	606 aa	Predicted RBP	18.22	■□□□□ 0.51
RPP1B	YDL130W	ANP1	P32629	500 aa		18.22	■□□□□ 0.51
RPP1B	YDL130W	RIT1	P23796	513 aa		18.21	■□□□□ 0.51
RPP1B	YDL130W	PER1	P25625	357 aa		18.21	■□□□□ 0.51
RPP1B	YDL130W	PRO3	P32263	286 aa	Known RBP	18.21	■□□□□ 0.51
RPP1B	YDL130W	MYO3	P36006	1272 aa		18.21	■□□□□ 0.51
RPP1B	YDL130W	CRG1	P38892	291 aa	RIP-Chip data	18.21	■□□□□ 0.51	not detected
RPP1B	YDL130W	ACE2	P21192	770 aa		18.2	■□□□□ 0.5
RPP1B	YDL130W	YML037C	Q03703	340 aa		18.2	■□□□□ 0.5
RPP1B	YDL130W	CDC60	P26637	1090 aa	Known RBP	18.19	■□□□□ 0.5
RPP1B	YDL130W	RER2	P35196	286 aa		18.19	■□□□□ 0.5
RPP1B	YDL130W	TUS1	Q06412	1307 aa		18.19	■□□□□ 0.5
RPP1B	YDL130W	SAM2	P19358	384 aa	Known RBP	18.18	■□□□□ 0.5
RPP1B	YDL130W	HXT17	P53631	564 aa		18.18	■□□□□ 0.5
RPP1B	YDL130W	UBX5	Q06682	500 aa		18.18	■□□□□ 0.5
RPP1B	YDL130W	IMP2'	P32351	346 aa		18.17	■□□□□ 0.5
RPP1B	YDL130W	CIC1	P38779	376 aa	Known RBP	18.17	■□□□□ 0.5
RPP1B	YDL130W	PES4	P39684	611 aa		18.17	■□□□□ 0.5
RPP1B	YDL130W	SOL4	P53315	255 aa		18.17	■□□□□ 0.5
RPP1B	YDL130W	DLD1	P32891	587 aa		18.16	■□□□□ 0.5
RPP1B	YDL130W	TY3A-G	Q12173	290 aa		18.16	■□□□□ 0.5
RPP1B	YDL130W	TY3A-I	Q99219	290 aa		18.16	■□□□□ 0.5
RPP1B	YDL130W	HXT13	P39924	564 aa		18.15	■□□□□ 0.5
RPP1B	YDL130W	UBP9	P39967	754 aa		18.15	■□□□□ 0.5
RPP1B	YDL130W	ATG1	P53104	897 aa		18.15	■□□□□ 0.5

Retrieved 100 of 5,963 RNA–protein pairs in 102.3 ms