RNA–Protein interactions for RNA: YDL097C

RPN6, Transcript of Essential, non-ATPase regulatory subunit of the 26S proteasome lid, yeastyeast

Gene RPN6, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN6YDL097C KTR4P38131 464 aa5.95□□□□□ -1.46
RPN6YDL097C UTP7P40055 554 aaKnown RBP5.95□□□□□ -1.46
RPN6YDL097C BRE2P43132 505 aa5.95□□□□□ -1.46
RPN6YDL097C YJL007CP47080 104 aa5.95□□□□□ -1.46
RPN6YDL097C CTF4Q01454 927 aa5.95□□□□□ -1.46
RPN6YDL097C PFK2P16862 959 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
RPN6YDL097C MTC3P53077 123 aa5.94□□□□□ -1.46
RPN6YDL097C RPP1BP10622 106 aaKnown RBP5.93□□□□□ -1.46
RPN6YDL097C GRX4P32642 244 aa5.93□□□□□ -1.46
RPN6YDL097C UBP14P38237 781 aaKnown RBP5.93□□□□□ -1.46
RPN6YDL097C BUB1P41695 1021 aaKnown RBP RIP-Chip data5.93□□□□□ -1.46not detected
RPN6YDL097C UBX2Q04228 584 aa5.93□□□□□ -1.46
RPN6YDL097C ICL2Q12031 575 aa5.93□□□□□ -1.46
RPN6YDL097C TY3A-GQ12173 290 aa5.93□□□□□ -1.46
RPN6YDL097C TY3A-IQ99219 290 aa5.93□□□□□ -1.46
RPN6YDL097C AUS1Q08409 1394 aa5.92□□□□□ -1.46
RPN6YDL097C KRE2P27809 442 aa5.92□□□□□ -1.46
RPN6YDL097C RAD54P32863 898 aa5.92□□□□□ -1.46
RPN6YDL097C AIR1P40507 360 aaKnown RBP5.92□□□□□ -1.46
RPN6YDL097C AIM21P40563 679 aa5.92□□□□□ -1.46
RPN6YDL097C BUD20Q08004 166 aaPredicted RBP5.92□□□□□ -1.46
RPN6YDL097C SUT2Q12286 268 aa5.92□□□□□ -1.46
RPN6YDL097C STB3Q12427 513 aa5.92□□□□□ -1.46
RPN6YDL097C SSK22P25390 1331 aaPredicted RBP5.92□□□□□ -1.46
RPN6YDL097C SEN1Q00416 2231 aaKnown RBP5.91□□□□□ -1.46
RPN6YDL097C PRT1P06103 763 aaKnown RBP5.91□□□□□ -1.46
RPN6YDL097C ERG12P07277 443 aa5.91□□□□□ -1.46
RPN6YDL097C IRE1P32361 1115 aa5.91□□□□□ -1.46
RPN6YDL097C STM1P39015 273 aaKnown RBP5.91□□□□□ -1.46
RPN6YDL097C NET1P47035 1189 aa5.91□□□□□ -1.46
RPN6YDL097C ZDS1P50111 915 aaKnown RBP5.91□□□□□ -1.46
RPN6YDL097C DSD1P53095 428 aa5.91□□□□□ -1.46
RPN6YDL097C PPM2Q08282 695 aa5.91□□□□□ -1.46
RPN6YDL097C MDM20Q12387 796 aaKnown RBP5.91□□□□□ -1.46
RPN6YDL097C TUS1Q06412 1307 aa5.91□□□□□ -1.46
RPN6YDL097C ARG8P18544 423 aa5.9□□□□□ -1.47
RPN6YDL097C CDC60P26637 1090 aaKnown RBP5.9□□□□□ -1.47
RPN6YDL097C RDH54P38086 958 aa5.9□□□□□ -1.47
RPN6YDL097C BRE5P53741 515 aaKnown RBP5.9□□□□□ -1.47
RPN6YDL097C GCR2Q01722 534 aa5.9□□□□□ -1.47
RPN6YDL097C PRP42Q03776 544 aaKnown RBP5.9□□□□□ -1.47
RPN6YDL097C HIM1Q06674 414 aa5.9□□□□□ -1.47
RPN6YDL097C BOI1P38041 980 aaKnown RBP5.89□□□□□ -1.47
RPN6YDL097C AFG3P39925 761 aa5.89□□□□□ -1.47
RPN6YDL097C YRR1Q12172 810 aa5.89□□□□□ -1.47
RPN6YDL097C MIP1P15801 1254 aa5.88□□□□□ -1.47
RPN6YDL097C KCC4P25389 1037 aa5.88□□□□□ -1.47
RPN6YDL097C RPS7AP26786 190 aaKnown RBP5.88□□□□□ -1.47
RPN6YDL097C YJR107WP47145 328 aa5.88□□□□□ -1.47
RPN6YDL097C CFT2Q12102 859 aaPredicted RBP5.88□□□□□ -1.47
RPN6YDL097C MCD4P36051 919 aa5.87□□□□□ -1.47
RPN6YDL097C TPS3P38426 1054 aaKnown RBP5.87□□□□□ -1.47
RPN6YDL097C MCM6P53091 1017 aaKnown RBP5.87□□□□□ -1.47
RPN6YDL097C ADR1P07248 1323 aa5.86□□□□□ -1.47
RPN6YDL097C CAN1P04817 590 aa5.86□□□□□ -1.47
RPN6YDL097C SRS2P12954 1174 aa5.86□□□□□ -1.47
RPN6YDL097C KTR2P33550 425 aa5.86□□□□□ -1.47
RPN6YDL097C APL2P36000 726 aaPredicted RBP5.86□□□□□ -1.47
RPN6YDL097C CST6P40535 587 aa5.86□□□□□ -1.47
RPN6YDL097C STR2P47164 639 aa5.86□□□□□ -1.47
RPN6YDL097C RPT4P53549 437 aaKnown RBP5.86□□□□□ -1.47
RPN6YDL097C TAP42Q04372 366 aa5.86□□□□□ -1.47
RPN6YDL097C AOS1Q06624 347 aa5.86□□□□□ -1.47
RPN6YDL097C DPH6Q12429 685 aa5.86□□□□□ -1.47
RPN6YDL097C SET1P38827 1080 aaKnown RBP5.85□□□□□ -1.47
RPN6YDL097C ISM1P48526 1002 aa5.85□□□□□ -1.47
RPN6YDL097C ART5P53244 586 aaKnown RBP5.85□□□□□ -1.47
RPN6YDL097C ICP55P40051 511 aa5.84□□□□□ -1.47
RPN6YDL097C ARG82P07250 355 aa5.83□□□□□ -1.48
RPN6YDL097C RPL40AP0CH08 128 aaKnown RBP5.83□□□□□ -1.48
RPN6YDL097C RPL40BP0CH09 128 aaKnown RBP5.83□□□□□ -1.48
RPN6YDL097C OCT1P35999 772 aa5.83□□□□□ -1.48
RPN6YDL097C RSC8P43609 557 aaKnown RBP5.83□□□□□ -1.48
RPN6YDL097C ACK1Q07622 623 aaPredicted RBP5.83□□□□□ -1.48
RPN6YDL097C GRS1P38088 690 aaKnown RBP5.82□□□□□ -1.48
RPN6YDL097C SPL2P38839 148 aa5.82□□□□□ -1.48
RPN6YDL097C KEL1P38853 1164 aaKnown RBP5.82□□□□□ -1.48
RPN6YDL097C JHD1P40034 492 aa5.82□□□□□ -1.48
RPN6YDL097C TOS4Q06266 489 aa5.82□□□□□ -1.48
RPN6YDL097C MET7Q08645 548 aa5.82□□□□□ -1.48
RPN6YDL097C YPR204WQ08995 1032 aa5.82□□□□□ -1.48
RPN6YDL097C PRE10P21242 288 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
RPN6YDL097C YDJ1P25491 409 aaKnown RBP5.81□□□□□ -1.48
RPN6YDL097C NUD1P32336 851 aa5.81□□□□□ -1.48
RPN6YDL097C KSP1P38691 1029 aaKnown RBP5.81□□□□□ -1.48
RPN6YDL097C MXR1P40029 184 aa5.81□□□□□ -1.48
RPN6YDL097C UBR2Q07963 1872 aa5.81□□□□□ -1.48
RPN6YDL097C SPT16P32558 1035 aaKnown RBP5.8□□□□□ -1.48
RPN6YDL097C SCT1P32784 759 aa5.8□□□□□ -1.48
RPN6YDL097C NPL4P33755 580 aa5.8□□□□□ -1.48
RPN6YDL097C KIC1P38692 1080 aa5.8□□□□□ -1.48
RPN6YDL097C OYE3P41816 400 aaPredicted RBP5.8□□□□□ -1.48
RPN6YDL097C VPS64Q03944 604 aa5.8□□□□□ -1.48
RPN6YDL097C VAB2P40003 282 aa5.79□□□□□ -1.48
RPN6YDL097C LYS14P40971 790 aa5.79□□□□□ -1.48
RPN6YDL097C ORC1P54784 914 aaPredicted RBP5.79□□□□□ -1.48
RPN6YDL097C RAD53P22216 821 aa5.78□□□□□ -1.48
RPN6YDL097C SPB4P25808 606 aaPredicted RBP5.78□□□□□ -1.48
RPN6YDL097C GCD11P32481 527 aaKnown RBP5.78□□□□□ -1.48
RPN6YDL097C BCS1P32839 456 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms