RNA–Protein interactions for RNA: YDL013W

SLX5, Transcript of Subunit of the Slx5-Slx8 SUMO-targeted ubiquitin ligase complex, yeastyeast

Gene SLX5, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX5YDL013W SMC3P47037 1230 aa7.26□□□□□ -1.25
SLX5YDL013W DNF2Q12675 1612 aa7.26□□□□□ -1.25
SLX5YDL013W ARO1P08566 1588 aaKnown RBP7.26□□□□□ -1.25
SLX5YDL013W ERP5P38819 212 aa7.26□□□□□ -1.25
SLX5YDL013W IPL1P38991 367 aa7.26□□□□□ -1.25
SLX5YDL013W PUF6Q04373 656 aaKnown RBP7.26□□□□□ -1.25
SLX5YDL013W KAR5Q04746 504 aa7.26□□□□□ -1.25
SLX5YDL013W YPR172WQ06608 200 aa7.26□□□□□ -1.25
SLX5YDL013W RRN6P32786 894 aa7.25□□□□□ -1.25
SLX5YDL013W ROM1P53046 1155 aa7.25□□□□□ -1.25
SLX5YDL013W YGL081WP53156 320 aa7.25□□□□□ -1.25
SLX5YDL013W NFI1Q12216 726 aa7.25□□□□□ -1.25
SLX5YDL013W HSP42Q12329 375 aa7.25□□□□□ -1.25
SLX5YDL013W NOP58Q12499 511 aaKnown RBP7.25□□□□□ -1.25
SLX5YDL013W TRM3Q07527 1436 aa7.25□□□□□ -1.25
SLX5YDL013W CLN1P20437 546 aa7.24□□□□□ -1.25
SLX5YDL013W VAC17P25591 423 aa7.24□□□□□ -1.25
SLX5YDL013W POL5P39985 1022 aaKnown RBP7.24□□□□□ -1.25
SLX5YDL013W UBX5Q06682 500 aa7.24□□□□□ -1.25
SLX5YDL013W BLI1P35727 113 aa7.24□□□□□ -1.25
SLX5YDL013W HOS2P53096 452 aaPredicted RBP7.24□□□□□ -1.25
SLX5YDL013W CTR9P89105 1077 aa7.24□□□□□ -1.25
SLX5YDL013W ERV41Q04651 352 aa7.24□□□□□ -1.25
SLX5YDL013W PSR1Q07800 427 aa7.24□□□□□ -1.25
SLX5YDL013W RIX7Q07844 837 aaKnown RBP7.24□□□□□ -1.25
SLX5YDL013W TSC13Q99190 310 aa7.24□□□□□ -1.25
SLX5YDL013W MFT1P33441 392 aaKnown RBP7.23□□□□□ -1.25
SLX5YDL013W BNI5P53890 448 aaKnown RBP7.23□□□□□ -1.25
SLX5YDL013W PUS1Q12211 544 aaKnown RBP7.23□□□□□ -1.25
SLX5YDL013W CHC1P22137 1653 aaKnown RBP7.23□□□□□ -1.25
SLX5YDL013W PDI1P17967 522 aaKnown RBP7.22□□□□□ -1.25
SLX5YDL013W OPI1P21957 404 aa7.22□□□□□ -1.25
SLX5YDL013W PAF1P38351 445 aa7.22□□□□□ -1.25
SLX5YDL013W RAD26P40352 1085 aa7.22□□□□□ -1.25
SLX5YDL013W YOR389WQ08912 624 aa7.22□□□□□ -1.25
SLX5YDL013W GLE1Q12315 538 aa7.22□□□□□ -1.25
SLX5YDL013W TRL1P09880 827 aaKnown RBP7.21□□□□□ -1.25
SLX5YDL013W TPD3P31383 635 aa7.21□□□□□ -1.25
SLX5YDL013W ERP2P39704 215 aa7.21□□□□□ -1.25
SLX5YDL013W NOC2P39744 710 aaKnown RBP7.21□□□□□ -1.25
SLX5YDL013W RRD1P40454 393 aaKnown RBP7.21□□□□□ -1.25
SLX5YDL013W YML082WQ04533 649 aaKnown RBP7.21□□□□□ -1.25
SLX5YDL013W IXR1P33417 597 aa7.21□□□□□ -1.26
SLX5YDL013W VTC3Q02725 835 aa7.21□□□□□ -1.26
SLX5YDL013W PNP1Q05788 311 aa7.21□□□□□ -1.26
SLX5YDL013W YDL121CQ07541 149 aa7.21□□□□□ -1.26
SLX5YDL013W GAS4Q08271 471 aa7.21□□□□□ -1.26
SLX5YDL013W PMC1P38929 1173 aaPredicted RBP7.2□□□□□ -1.26
SLX5YDL013W VPS27P40343 622 aaKnown RBP7.2□□□□□ -1.26
SLX5YDL013W PRP43P53131 767 aaKnown RBP7.2□□□□□ -1.26
SLX5YDL013W RRB1Q04225 511 aaKnown RBP7.2□□□□□ -1.26
SLX5YDL013W JIP5Q06214 492 aaPredicted RBP7.2□□□□□ -1.26
SLX5YDL013W MSC6Q08818 692 aaKnown RBP7.2□□□□□ -1.26
SLX5YDL013W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.2□□□□□ -1.26not detected
SLX5YDL013W SAC3P46674 1301 aa7.2□□□□□ -1.26
SLX5YDL013W YSP2Q06681 1438 aa7.2□□□□□ -1.26
SLX5YDL013W HAL5P38970 855 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W BOI2P39969 1040 aa7.19□□□□□ -1.26
SLX5YDL013W FAF1P40546 346 aaPredicted RBP7.19□□□□□ -1.26
SLX5YDL013W RIA1P53893 1110 aa7.19□□□□□ -1.26
SLX5YDL013W EAF7P53911 425 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W ISR1Q06098 443 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W RSC2Q06488 889 aa7.19□□□□□ -1.26
SLX5YDL013W PUN1Q06991 263 aa7.19□□□□□ -1.26
SLX5YDL013W SGT2Q12118 346 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W TY4A-HQ6Q5P6 413 aa7.19□□□□□ -1.26
SLX5YDL013W SRP54P20424 541 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W VMA4P22203 233 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W MSM1P22438 575 aa7.19□□□□□ -1.26
SLX5YDL013W STE5P32917 917 aa7.19□□□□□ -1.26
SLX5YDL013W PAM1P37304 830 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W GRS1P38088 690 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W DSN1P40568 576 aa7.19□□□□□ -1.26
SLX5YDL013W IES1P43579 692 aa7.19□□□□□ -1.26
SLX5YDL013W TMA64Q04600 565 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W LSP1Q12230 341 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W AIR2Q12476 344 aaKnown RBP7.19□□□□□ -1.26
SLX5YDL013W MOD5P07884 428 aa7.18□□□□□ -1.26
SLX5YDL013W PWP2P25635 923 aaKnown RBP7.18□□□□□ -1.26
SLX5YDL013W MUM2P38236 366 aa7.18□□□□□ -1.26
SLX5YDL013W YHL050CP38721 697 aa7.18□□□□□ -1.26
SLX5YDL013W YHR219WP38900 624 aa7.18□□□□□ -1.26
SLX5YDL013W MDJ2P42834 146 aa7.18□□□□□ -1.26
SLX5YDL013W YNL247WP53852 767 aaKnown RBP7.18□□□□□ -1.26
SLX5YDL013W SRS2P12954 1174 aa7.17□□□□□ -1.26
SLX5YDL013W MIP1P15801 1254 aa7.17□□□□□ -1.26
SLX5YDL013W TOM20P35180 183 aa7.17□□□□□ -1.26
SLX5YDL013W BOL3P39724 118 aa7.17□□□□□ -1.26
SLX5YDL013W CTF4Q01454 927 aa7.17□□□□□ -1.26
SLX5YDL013W CEX1Q12453 761 aa7.17□□□□□ -1.26
SLX5YDL013W SEC7P11075 2009 aaKnown RBP7.17□□□□□ -1.26
SLX5YDL013W VAN1P23642 535 aa7.17□□□□□ -1.26
SLX5YDL013W UBP1P25037 809 aa7.17□□□□□ -1.26
SLX5YDL013W BFA1P47113 574 aa7.17□□□□□ -1.26
SLX5YDL013W FUR4P05316 633 aaKnown RBP7.16□□□□□ -1.26
SLX5YDL013W MRF1P30775 413 aaPredicted RBP7.16□□□□□ -1.26
SLX5YDL013W AIM9P40053 627 aaKnown RBP7.16□□□□□ -1.26
SLX5YDL013W YFL034WP43564 1073 aa7.16□□□□□ -1.26
SLX5YDL013W CCM1P48237 864 aaPredicted RBP7.16□□□□□ -1.26
SLX5YDL013W APC5Q08683 685 aa7.16□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms