RNA–Protein interactions for RNA: YCR005C

CIT2, Transcript of Citrate synthase, yeastyeast

Gene CIT2, Length 1,383 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT2YCR005C YJU3P28321 313 aa8.63□□□□□ -1.03
CIT2YCR005C NMD2P38798 1089 aaKnown RBP8.63□□□□□ -1.03
CIT2YCR005C TUB4P53378 473 aa8.63□□□□□ -1.03
CIT2YCR005C FCP1Q03254 732 aa8.63□□□□□ -1.03
CIT2YCR005C ERF2Q06551 359 aa8.63□□□□□ -1.03
CIT2YCR005C BDF2Q07442 638 aa8.63□□□□□ -1.03
CIT2YCR005C RLF2Q12495 606 aa8.63□□□□□ -1.03
CIT2YCR005C SSK22P25390 1331 aaPredicted RBP8.63□□□□□ -1.03
CIT2YCR005C TY1A-DR4O74302 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-HP0C2I4 478 aaKnown RBP8.62□□□□□ -1.03
CIT2YCR005C TY1A-AP0CX57 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-PR1P0CX58 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-ORP0CX59 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-PR2P0CX60 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-DR5P0CX65 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-ER2P0CX66 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-GR3P0CX67 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-LR1P0CX68 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-MR2P0CX69 440 aa8.62□□□□□ -1.03
CIT2YCR005C SPT5P27692 1063 aaKnown RBP8.62□□□□□ -1.03
CIT2YCR005C NOP2P40991 618 aaKnown RBP8.62□□□□□ -1.03
CIT2YCR005C TY1A-JR2P47099 440 aa8.62□□□□□ -1.03
CIT2YCR005C KXD1P53158 218 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-DR1Q03856 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-ML1Q04706 440 aaKnown RBP8.62□□□□□ -1.03
CIT2YCR005C IRC3Q06683 689 aa8.62□□□□□ -1.03
CIT2YCR005C ALR1Q08269 859 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-BRQ12217 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-NL2Q12470 440 aa8.62□□□□□ -1.03
CIT2YCR005C TY1A-GR2Q12485 440 aa8.62□□□□□ -1.03
CIT2YCR005C SEC2P17065 759 aa8.61□□□□□ -1.03
CIT2YCR005C SSF1P38789 453 aaPredicted RBP8.61□□□□□ -1.03
CIT2YCR005C RRN7P40992 514 aa8.61□□□□□ -1.03
CIT2YCR005C MTC5Q03897 1148 aa8.61□□□□□ -1.03
CIT2YCR005C ECM16Q04217 1267 aaKnown RBP8.61□□□□□ -1.03
CIT2YCR005C SNU66Q12420 587 aaPredicted RBP8.61□□□□□ -1.03
CIT2YCR005C NCB2Q92317 146 aa8.61□□□□□ -1.03
CIT2YCR005C GCD7P32502 381 aaPredicted RBP8.61□□□□□ -1.03
CIT2YCR005C RSC30P38781 883 aa8.61□□□□□ -1.03
CIT2YCR005C RPA14P50106 137 aa8.61□□□□□ -1.03
CIT2YCR005C MSN5P52918 1224 aa8.61□□□□□ -1.03
CIT2YCR005C ERG12P07277 443 aa8.6□□□□□ -1.03
CIT2YCR005C XDJ1P39102 459 aa8.6□□□□□ -1.03
CIT2YCR005C RPL34BP40525 121 aaKnown RBP8.6□□□□□ -1.03
CIT2YCR005C BDP1P46678 594 aa8.6□□□□□ -1.03
CIT2YCR005C PKC1P24583 1151 aa8.59□□□□□ -1.03
CIT2YCR005C SAC3P46674 1301 aa8.58□□□□□ -1.04
CIT2YCR005C PFF1P38244 976 aa8.58□□□□□ -1.04
CIT2YCR005C SYF1Q04048 859 aaPredicted RBP8.58□□□□□ -1.04
CIT2YCR005C AGE1Q04412 482 aa8.58□□□□□ -1.04
CIT2YCR005C YDL206WQ12424 762 aa8.58□□□□□ -1.04
CIT2YCR005C MAK16P10962 306 aaPredicted RBP8.57□□□□□ -1.04
CIT2YCR005C YKL222CP35995 705 aa8.57□□□□□ -1.04
CIT2YCR005C RFC1P38630 861 aaKnown RBP8.57□□□□□ -1.04
CIT2YCR005C YJL007CP47080 104 aa8.57□□□□□ -1.04
CIT2YCR005C NAF1P53919 492 aaKnown RBP8.57□□□□□ -1.04
CIT2YCR005C YPR097WQ06839 1073 aa8.57□□□□□ -1.04
CIT2YCR005C DPH6Q12429 685 aa8.56□□□□□ -1.04
CIT2YCR005C YEL077CQ3E7X8 1277 aa8.56□□□□□ -1.04
CIT2YCR005C CTT1P06115 562 aa8.54□□□□□ -1.04
CIT2YCR005C FRD1P32614 470 aaKnown RBP8.54□□□□□ -1.04
CIT2YCR005C EAF6P47128 113 aa8.54□□□□□ -1.04
CIT2YCR005C CWH41P53008 833 aa8.54□□□□□ -1.04
CIT2YCR005C ERO1Q03103 563 aa8.54□□□□□ -1.04
CIT2YCR005C SRC1Q03707 834 aa8.54□□□□□ -1.04
CIT2YCR005C PDR18P53756 1333 aa8.54□□□□□ -1.04
CIT2YCR005C SMY1P32364 656 aaKnown RBP8.53□□□□□ -1.04
CIT2YCR005C NGR1P32831 672 aaKnown RBP8.53□□□□□ -1.04
CIT2YCR005C ERT1P38140 529 aa8.53□□□□□ -1.04
CIT2YCR005C HXT10P43581 546 aa8.53□□□□□ -1.04
CIT2YCR005C UBP16Q02863 499 aa8.53□□□□□ -1.04
CIT2YCR005C NKP2Q06162 153 aa8.53□□□□□ -1.04
CIT2YCR005C CAF20P12962 161 aaKnown RBP8.52□□□□□ -1.05
CIT2YCR005C RPC31P17890 251 aa8.52□□□□□ -1.05
CIT2YCR005C PAC1P39946 494 aaKnown RBP8.52□□□□□ -1.05
CIT2YCR005C YER156CP40093 338 aaKnown RBP8.52□□□□□ -1.05
CIT2YCR005C MLC1P53141 149 aa8.52□□□□□ -1.05
CIT2YCR005C RRI2Q12348 645 aa8.52□□□□□ -1.05
CIT2YCR005C SLA1P32790 1244 aa8.51□□□□□ -1.05
CIT2YCR005C BIM1P40013 344 aa8.51□□□□□ -1.05
CIT2YCR005C THI3Q07471 609 aa8.51□□□□□ -1.05
CIT2YCR005C GRX6Q12438 231 aa8.51□□□□□ -1.05
CIT2YCR005C RAD50P12753 1312 aa8.5□□□□□ -1.05
CIT2YCR005C MGM1P32266 881 aa8.5□□□□□ -1.05
CIT2YCR005C ICP55P40051 511 aa8.5□□□□□ -1.05
CIT2YCR005C YGL242CP53066 181 aa8.5□□□□□ -1.05
CIT2YCR005C ADR1P07248 1323 aa8.49□□□□□ -1.05
CIT2YCR005C CDC16P09798 840 aa8.49□□□□□ -1.05
CIT2YCR005C SEC18P18759 758 aaKnown RBP8.49□□□□□ -1.05
CIT2YCR005C ECM21P38167 1117 aaKnown RBP8.49□□□□□ -1.05
CIT2YCR005C NUG1P40010 520 aaKnown RBP8.49□□□□□ -1.05
CIT2YCR005C UBX2Q04228 584 aa8.49□□□□□ -1.05
CIT2YCR005C PMD1P32634 1753 aa8.49□□□□□ -1.05
CIT2YCR005C POM152P39685 1337 aa8.49□□□□□ -1.05
CIT2YCR005C NOT3P06102 836 aaKnown RBP8.48□□□□□ -1.05
CIT2YCR005C PDC1P06169 563 aaKnown RBP8.48□□□□□ -1.05
CIT2YCR005C BRE1Q07457 700 aaKnown RBP8.48□□□□□ -1.05
CIT2YCR005C PIF1P07271 859 aa8.48□□□□□ -1.05
CIT2YCR005C VAS1P07806 1104 aaKnown RBP8.48□□□□□ -1.05
CIT2YCR005C RPT4P53549 437 aaKnown RBP8.48□□□□□ -1.05
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms