RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	PCL8	Q08966	492 aa		6.92	□□□□□ -1.3
ATG12	YBR217W	KEL3	Q08979	651 aa	Predicted RBP	6.92	□□□□□ -1.3
ATG12	YBR217W	KTR1	P27810	393 aa	Known RBP	6.91	□□□□□ -1.3
ATG12	YBR217W	BSD2	P38356	321 aa		6.91	□□□□□ -1.3
ATG12	YBR217W	TPS3	P38426	1054 aa	Known RBP	6.91	□□□□□ -1.3
ATG12	YBR217W	NOP2	P40991	618 aa	Known RBP	6.91	□□□□□ -1.3
ATG12	YBR217W	KAR5	Q04746	504 aa		6.91	□□□□□ -1.3
ATG12	YBR217W	TUB2	P02557	457 aa	Known RBP	6.9	□□□□□ -1.3
ATG12	YBR217W	NPL4	P33755	580 aa		6.9	□□□□□ -1.3
ATG12	YBR217W	IOC3	P43596	787 aa		6.9	□□□□□ -1.3
ATG12	YBR217W	BBC1	P47068	1157 aa		6.9	□□□□□ -1.3
ATG12	YBR217W	PKH3	Q03306	898 aa	Predicted RBP	6.9	□□□□□ -1.3
ATG12	YBR217W	PPM2	Q08282	695 aa		6.9	□□□□□ -1.3
ATG12	YBR217W	GIN4	Q12263	1142 aa		6.9	□□□□□ -1.3
ATG12	YBR217W	TIF6	Q12522	245 aa	Known RBP	6.9	□□□□□ -1.3
ATG12	YBR217W	KIN1	P13185	1064 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	COQ1	P18900	473 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	GEF1	P37020	779 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	YDL124W	Q07551	312 aa	Known RBP	6.89	□□□□□ -1.31
ATG12	YBR217W	YPL260W	Q08977	551 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	TAH18	Q12181	623 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	LAM4	P38800	1345 aa		6.89	□□□□□ -1.31
ATG12	YBR217W	APE3	P37302	537 aa	Known RBP	6.88	□□□□□ -1.31
ATG12	YBR217W	OSH3	P38713	996 aa	Known RBP	6.88	□□□□□ -1.31
ATG12	YBR217W	STM1	P39015	273 aa	Known RBP	6.88	□□□□□ -1.31
ATG12	YBR217W	ACA1	P39970	489 aa		6.88	□□□□□ -1.31
ATG12	YBR217W	ENP2	P48234	707 aa	Known RBP	6.88	□□□□□ -1.31
ATG12	YBR217W	JIP4	Q03361	876 aa		6.88	□□□□□ -1.31
ATG12	YBR217W	ECM16	Q04217	1267 aa	Known RBP	6.88	□□□□□ -1.31
ATG12	YBR217W	CST9	Q06032	482 aa		6.88	□□□□□ -1.31
ATG12	YBR217W	CHO2	P05374	869 aa	Known RBP	6.87	□□□□□ -1.31
ATG12	YBR217W	VAS1	P07806	1104 aa	Known RBP	6.87	□□□□□ -1.31
ATG12	YBR217W	MOT2	P34909	587 aa	Known RBP	6.87	□□□□□ -1.31
ATG12	YBR217W	SLN1	P39928	1220 aa	Predicted RBP	6.87	□□□□□ -1.31
ATG12	YBR217W	MSH4	P40965	878 aa	Predicted RBP	6.87	□□□□□ -1.31
ATG12	YBR217W	RBA50	Q04418	439 aa		6.87	□□□□□ -1.31
ATG12	YBR217W	RIM20	Q12033	661 aa		6.87	□□□□□ -1.31
ATG12	YBR217W	KRS1	P15180	591 aa	Known RBP	6.86	□□□□□ -1.31
ATG12	YBR217W	OPI1	P21957	404 aa		6.86	□□□□□ -1.31
ATG12	YBR217W	ASH1	P34233	588 aa		6.86	□□□□□ -1.31
ATG12	YBR217W	YHL050C	P38721	697 aa		6.86	□□□□□ -1.31
ATG12	YBR217W	RTS1	P38903	757 aa		6.86	□□□□□ -1.31
ATG12	YBR217W	MRD1	Q06106	887 aa	Known RBP	6.86	□□□□□ -1.31
ATG12	YBR217W	SRF1	Q12516	437 aa		6.86	□□□□□ -1.31
ATG12	YBR217W	RAD50	P12753	1312 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	FBP1	P09201	348 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	PRE8	P23639	250 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	YDJ1	P25491	409 aa	Known RBP	6.85	□□□□□ -1.31
ATG12	YBR217W	MET1	P36150	593 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	CST26	P38226	397 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	RSC30	P38781	883 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	RRP8	P38961	392 aa	Known RBP	6.85	□□□□□ -1.31
ATG12	YBR217W	VID27	P40157	782 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	FPR4	Q06205	392 aa	Predicted RBP	6.85	□□□□□ -1.31
ATG12	YBR217W	LAP2	Q10740	671 aa		6.85	□□□□□ -1.31
ATG12	YBR217W	MPH3	P0CE00	602 aa		6.84	□□□□□ -1.31
ATG12	YBR217W	IXR1	P33417	597 aa		6.84	□□□□□ -1.31
ATG12	YBR217W	OCT1	P35999	772 aa		6.84	□□□□□ -1.31
ATG12	YBR217W	AAP1	P37898	856 aa	Known RBP	6.84	□□□□□ -1.31
ATG12	YBR217W	SNU71	P53207	620 aa	Known RBP	6.84	□□□□□ -1.31
ATG12	YBR217W	RPS15	Q01855	142 aa	Known RBP	6.84	□□□□□ -1.31
ATG12	YBR217W	RAD61	Q99359	647 aa		6.84	□□□□□ -1.31
ATG12	YBR217W	ACE2	P21192	770 aa		6.83	□□□□□ -1.32
ATG12	YBR217W	SRM1	P21827	482 aa		6.83	□□□□□ -1.32
ATG12	YBR217W	CDC27	P38042	758 aa		6.83	□□□□□ -1.32
ATG12	YBR217W	BRN1	P38170	754 aa		6.83	□□□□□ -1.32
ATG12	YBR217W	UBP10	P53874	792 aa	Predicted RBP	6.83	□□□□□ -1.32
ATG12	YBR217W	CHS3	P29465	1165 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	TIF4631	P39935	952 aa	Known RBP	6.82	□□□□□ -1.32
ATG12	YBR217W	LYS14	P40971	790 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	NET1	P47035	1189 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	YJL007C	P47080	104 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	NCS6	P53088	359 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	HXT17	P53631	564 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	UFD2	P54860	961 aa		6.82	□□□□□ -1.32
ATG12	YBR217W	PGA3	Q12746	312 aa	Known RBP	6.82	□□□□□ -1.32
ATG12	YBR217W	ERG12	P07277	443 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	SAM2	P19358	384 aa	Known RBP	6.81	□□□□□ -1.32
ATG12	YBR217W	PRO3	P32263	286 aa	Known RBP	6.81	□□□□□ -1.32
ATG12	YBR217W	MCD4	P36051	919 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	VPS8	P39702	1274 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	SPR3	P41901	512 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	HDA1	P53973	706 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	SGD1	Q06132	899 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	SKG3	Q06315	1026 aa		6.81	□□□□□ -1.32
ATG12	YBR217W	CFT2	Q12102	859 aa	Predicted RBP	6.81	□□□□□ -1.32
ATG12	YBR217W	RIT1	P23796	513 aa		6.8	□□□□□ -1.32
ATG12	YBR217W	SPB4	P25808	606 aa	Predicted RBP	6.8	□□□□□ -1.32
ATG12	YBR217W	ANP1	P32629	500 aa		6.8	□□□□□ -1.32
ATG12	YBR217W	MYO3	P36006	1272 aa		6.8	□□□□□ -1.32
ATG12	YBR217W	ERG7	P38604	731 aa		6.8	□□□□□ -1.32
ATG12	YBR217W	HXT13	P39924	564 aa		6.8	□□□□□ -1.32
ATG12	YBR217W	PTK2	P47116	818 aa	Known RBP	6.8	□□□□□ -1.32
ATG12	YBR217W	YLR225C	Q05948	407 aa	Known RBP	6.8	□□□□□ -1.32
ATG12	YBR217W	SUB2	Q07478	446 aa	Known RBP	6.8	□□□□□ -1.32
ATG12	YBR217W	SSF2	Q12153	453 aa	Predicted RBP	6.8	□□□□□ -1.32
ATG12	YBR217W	IMP2'	P32351	346 aa		6.79	□□□□□ -1.32
ATG12	YBR217W	DLD1	P32891	587 aa		6.79	□□□□□ -1.32
ATG12	YBR217W	RER2	P35196	286 aa		6.79	□□□□□ -1.32
ATG12	YBR217W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	6.79	□□□□□ -1.32	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms