RNA–Protein interactions for RNA: RPM1

RPM1, Transcript of RNA component of mitochondrial RNase P, yeastyeast

Gene RPM1, Length 483 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPM1RPM1 DLD1P32891 587 aa12.03□□□□□ -0.48
RPM1RPM1 YSH1Q06224 779 aaPredicted RBP12.02□□□□□ -0.49
RPM1RPM1 GAS5Q08193 484 aa12.02□□□□□ -0.49
RPM1RPM1 OPI1P21957 404 aa12.01□□□□□ -0.49
RPM1RPM1 KCC4P25389 1037 aa12.01□□□□□ -0.49
RPM1RPM1 YDR341CQ05506 607 aaKnown RBP12.01□□□□□ -0.49
RPM1RPM1 AOS1Q06624 347 aa12.01□□□□□ -0.49
RPM1RPM1 TSR4P25040 408 aa12□□□□□ -0.49
RPM1RPM1 PKH1Q03407 766 aa12□□□□□ -0.49
RPM1RPM1 RRG1Q12167 365 aaPredicted RBP12□□□□□ -0.49
RPM1RPM1 YMR1P47147 688 aaKnown RBP RIP-Chip data11.99□□□□□ -0.49not detected
RPM1RPM1 SGD1Q06132 899 aa11.99□□□□□ -0.49
RPM1RPM1 HAT1Q12341 374 aa11.99□□□□□ -0.49
RPM1RPM1 SSK22P25390 1331 aaPredicted RBP11.98□□□□□ -0.49
RPM1RPM1 TY4B-PA0A0B7P3V8 1104 aa11.98□□□□□ -0.49
RPM1RPM1 ECM16Q04217 1267 aaKnown RBP11.98□□□□□ -0.49
RPM1RPM1 YPR148CQ06523 435 aa11.98□□□□□ -0.49
RPM1RPM1 APL5Q08951 932 aaKnown RBP11.98□□□□□ -0.49
RPM1RPM1 ERP4Q12450 207 aa11.98□□□□□ -0.49
RPM1RPM1 TY4A-HQ6Q5P6 413 aa11.98□□□□□ -0.49
RPM1RPM1 CBP1P07252 654 aa11.97□□□□□ -0.49
RPM1RPM1 PET111P08468 800 aa11.97□□□□□ -0.49
RPM1RPM1 DBP1P24784 617 aaKnown RBP11.97□□□□□ -0.49
RPM1RPM1 PAH1P32567 862 aa11.97□□□□□ -0.49
RPM1RPM1 SEC27P41811 889 aaKnown RBP11.97□□□□□ -0.49
RPM1RPM1 TFG1P41895 735 aaPredicted RBP11.97□□□□□ -0.49
RPM1RPM1 TCB2P48231 1178 aa11.97□□□□□ -0.49
RPM1RPM1 ARP8Q12386 881 aaKnown RBP RIP-Chip data11.97□□□□□ -0.49not detected
RPM1RPM1 ASH1P34233 588 aa11.96□□□□□ -0.49
RPM1RPM1 AKL1P38080 1108 aaKnown RBP11.96□□□□□ -0.49
RPM1RPM1 NMD3P38861 518 aaKnown RBP11.96□□□□□ -0.49
RPM1RPM1 YLR225CQ05948 407 aaKnown RBP11.96□□□□□ -0.49
RPM1RPM1 CST6P40535 587 aa11.95□□□□□ -0.5
RPM1RPM1 YNR021WP53723 404 aaKnown RBP11.95□□□□□ -0.5
RPM1RPM1 RCF1Q03713 159 aa11.95□□□□□ -0.5
RPM1RPM1 ENT2Q05785 613 aa11.95□□□□□ -0.5
RPM1RPM1 COG4Q06096 861 aa11.95□□□□□ -0.5
RPM1RPM1 CFT2Q12102 859 aaPredicted RBP11.95□□□□□ -0.5
RPM1RPM1 YMR084WA2P2R3 262 aa11.94□□□□□ -0.5
RPM1RPM1 PWP2P25635 923 aaKnown RBP11.94□□□□□ -0.5
RPM1RPM1 DJP1P40564 432 aa11.94□□□□□ -0.5
RPM1RPM1 CEF1Q03654 590 aaPredicted RBP11.94□□□□□ -0.5
RPM1RPM1 SSB1P11484 613 aaKnown RBP11.93□□□□□ -0.5
RPM1RPM1 KAR1P11927 433 aa11.93□□□□□ -0.5
RPM1RPM1 VMA1P17255 1071 aaKnown RBP11.93□□□□□ -0.5
RPM1RPM1 BCK2P33306 851 aa11.93□□□□□ -0.5
RPM1RPM1 SSB2P40150 613 aaKnown RBP11.93□□□□□ -0.5
RPM1RPM1 RNH70P53331 553 aa11.93□□□□□ -0.5
RPM1RPM1 ULP1Q02724 621 aa11.93□□□□□ -0.5
RPM1RPM1 EAR1Q03212 550 aa11.93□□□□□ -0.5
RPM1RPM1 JIP4Q03361 876 aa11.92□□□□□ -0.5
RPM1RPM1 YPR204WQ08995 1032 aa11.92□□□□□ -0.5
RPM1RPM1 KAR2P16474 682 aaKnown RBP11.91□□□□□ -0.5
RPM1RPM1 SAP30P38429 201 aa11.91□□□□□ -0.5
RPM1RPM1 YNL011CP53980 444 aa11.91□□□□□ -0.5
RPM1RPM1 GDE1Q02979 1223 aa11.91□□□□□ -0.5
RPM1RPM1 YOL057WQ08225 711 aa11.91□□□□□ -0.5
RPM1RPM1 NKP1Q12493 238 aa11.91□□□□□ -0.5
RPM1RPM1 VPS29P38759 282 aa11.9□□□□□ -0.5
RPM1RPM1 SEN54Q02825 467 aaPredicted RBP11.9□□□□□ -0.5
RPM1RPM1 SAM3Q08986 587 aa11.9□□□□□ -0.5
RPM1RPM1 NOP58Q12499 511 aaKnown RBP11.9□□□□□ -0.5
RPM1RPM1 FLO11P08640 1367 aa11.9□□□□□ -0.5
RPM1RPM1 KRE2P27809 442 aa11.89□□□□□ -0.51
RPM1RPM1 PPG1P32838 368 aa11.89□□□□□ -0.51
RPM1RPM1 APL2P36000 726 aaPredicted RBP11.89□□□□□ -0.51
RPM1RPM1 MUM2P38236 366 aa11.89□□□□□ -0.51
RPM1RPM1 YLR257WQ06146 321 aaKnown RBP11.89□□□□□ -0.51
RPM1RPM1 NTH2P35172 780 aa11.88□□□□□ -0.51
RPM1RPM1 SPR3P41901 512 aa11.88□□□□□ -0.51
RPM1RPM1 TAF1P46677 1066 aa11.88□□□□□ -0.51
RPM1RPM1 HOS2P53096 452 aaPredicted RBP11.88□□□□□ -0.51
RPM1RPM1 RPL34AP87262 121 aaPredicted RBP11.88□□□□□ -0.51
RPM1RPM1 GRX3Q03835 250 aa11.88□□□□□ -0.51
RPM1RPM1 HSP42Q12329 375 aa11.88□□□□□ -0.51
RPM1RPM1 TY1B-AO13527 1196 aaKnown RBP11.87□□□□□ -0.51
RPM1RPM1 DPB3P27344 201 aa11.86□□□□□ -0.51
RPM1RPM1 PSF2P40359 213 aa11.86□□□□□ -0.51
RPM1RPM1 UTP7P40055 554 aaKnown RBP11.85□□□□□ -0.51
RPM1RPM1 CDC3P32457 520 aaKnown RBP11.84□□□□□ -0.51
RPM1RPM1 RPN12P32496 274 aa11.84□□□□□ -0.51
RPM1RPM1 TFC3P34111 1160 aa11.84□□□□□ -0.51
RPM1RPM1 STM1P39015 273 aaKnown RBP11.84□□□□□ -0.51
RPM1RPM1 DAN4P47179 1161 aa11.84□□□□□ -0.51
RPM1RPM1 UBX2Q04228 584 aa11.84□□□□□ -0.51
RPM1RPM1 SSF2Q12153 453 aaPredicted RBP11.84□□□□□ -0.51
RPM1RPM1 CHL1P22516 861 aaPredicted RBP11.83□□□□□ -0.52
RPM1RPM1 STS1P38637 319 aa11.83□□□□□ -0.52
RPM1RPM1 NPR3P38742 1146 aa11.83□□□□□ -0.52
RPM1RPM1 GSM1P42950 618 aa11.83□□□□□ -0.52
RPM1RPM1 DNM1P54861 757 aa11.83□□□□□ -0.52
RPM1RPM1 UGA3P26370 528 aa11.82□□□□□ -0.52
RPM1RPM1 MTC3P53077 123 aa11.82□□□□□ -0.52
RPM1RPM1 CLF1Q12309 687 aaPredicted RBP11.82□□□□□ -0.52
RPM1RPM1 MET1P36150 593 aa11.81□□□□□ -0.52
RPM1RPM1 NIT1P40447 199 aa11.81□□□□□ -0.52
RPM1RPM1 PAP2P53632 584 aaKnown RBP11.81□□□□□ -0.52
RPM1RPM1 MAK16P10962 306 aaPredicted RBP11.8□□□□□ -0.52
RPM1RPM1 SWI3P32591 825 aa11.8□□□□□ -0.52
RPM1RPM1 ICP55P40051 511 aa11.8□□□□□ -0.52
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms