RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 RRM3P38766 723 aa9.91□□□□□ -0.82
LSR1LSR1 CBP3P21560 335 aa9.9□□□□□ -0.82
LSR1LSR1 DIT2P21595 489 aa9.9□□□□□ -0.82
LSR1LSR1 VMS1Q04311 632 aaKnown RBP9.9□□□□□ -0.82
LSR1LSR1 SPN1Q06505 410 aaPredicted RBP9.9□□□□□ -0.82
LSR1LSR1 MSB4Q12317 492 aa9.9□□□□□ -0.82
LSR1LSR1 MPH3P0CE00 602 aa9.89□□□□□ -0.83
LSR1LSR1 RER2P35196 286 aa9.89□□□□□ -0.83
LSR1LSR1 YKT6P36015 200 aaKnown RBP9.89□□□□□ -0.83
LSR1LSR1 WAR1Q03631 944 aa9.89□□□□□ -0.83
LSR1LSR1 PFK2P16862 959 aaKnown RBP RIP-Chip data9.88□□□□□ -0.83not detected
LSR1LSR1 COQ1P18900 473 aa9.88□□□□□ -0.83
LSR1LSR1 NGR1P32831 672 aaKnown RBP9.88□□□□□ -0.83
LSR1LSR1 MFT1P33441 392 aaKnown RBP9.88□□□□□ -0.83
LSR1LSR1 GRX7P38068 203 aa9.88□□□□□ -0.83
LSR1LSR1 MAP2P38174 421 aaKnown RBP9.88□□□□□ -0.83
LSR1LSR1 PSY4P38193 441 aa9.88□□□□□ -0.83
LSR1LSR1 IRC8P47046 822 aa9.88□□□□□ -0.83
LSR1LSR1 EST2Q06163 884 aa9.88□□□□□ -0.83
LSR1LSR1 LAM6Q08001 693 aa9.88□□□□□ -0.83
LSR1LSR1 DCS2Q12123 353 aa9.88□□□□□ -0.83
LSR1LSR1 HSP82P02829 709 aaKnown RBP9.87□□□□□ -0.83
LSR1LSR1 RPN10P38886 268 aaKnown RBP9.87□□□□□ -0.83
LSR1LSR1 AKR1P39010 764 aa9.87□□□□□ -0.83
LSR1LSR1 CEP3P40969 608 aa9.87□□□□□ -0.83
LSR1LSR1 CTI6Q08923 506 aa9.87□□□□□ -0.83
LSR1LSR1 CHO2P05374 869 aaKnown RBP9.86□□□□□ -0.83
LSR1LSR1 NPL4P33755 580 aa9.86□□□□□ -0.83
LSR1LSR1 CTH1P47976 325 aa9.86□□□□□ -0.83
LSR1LSR1 ENP2P48234 707 aaKnown RBP9.86□□□□□ -0.83
LSR1LSR1 THI3Q07471 609 aa9.86□□□□□ -0.83
LSR1LSR1 HXK1P04806 485 aaKnown RBP9.85□□□□□ -0.83
LSR1LSR1 SWI4P25302 1093 aaKnown RBP9.85□□□□□ -0.83
LSR1LSR1 URA1P28272 314 aaPredicted RBP9.85□□□□□ -0.83
LSR1LSR1 MGM1P32266 881 aa9.85□□□□□ -0.83
LSR1LSR1 IOC3P43596 787 aa9.85□□□□□ -0.83
LSR1LSR1 STR2P47164 639 aa9.85□□□□□ -0.83
LSR1LSR1 HDA1P53973 706 aa9.85□□□□□ -0.83
LSR1LSR1 PMD1P32634 1753 aa9.84□□□□□ -0.83
LSR1LSR1 CDC6P09119 513 aa9.84□□□□□ -0.83
LSR1LSR1 SIS2P36024 562 aa9.84□□□□□ -0.83
LSR1LSR1 NOC2P39744 710 aaKnown RBP9.84□□□□□ -0.83
LSR1LSR1 NPR2P39923 615 aa9.84□□□□□ -0.83
LSR1LSR1 YIR042CP40586 236 aa9.84□□□□□ -0.83
LSR1LSR1 TFG2P41896 400 aaPredicted RBP9.84□□□□□ -0.83
LSR1LSR1 SRC1Q03707 834 aa9.84□□□□□ -0.83
LSR1LSR1 INM2Q05533 292 aa9.84□□□□□ -0.83
LSR1LSR1 HKR1P41809 1802 aa9.84□□□□□ -0.83
LSR1LSR1 RPL22AP05749 121 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 RGP1P16664 663 aa9.83□□□□□ -0.84
LSR1LSR1 HCA4P20448 770 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 VPS1P21576 704 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 OXP1P28273 1286 aa9.83□□□□□ -0.84
LSR1LSR1 PRP40P33203 583 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 BMH2P34730 273 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 PXL1P36166 706 aa9.83□□□□□ -0.84
LSR1LSR1 ICP55P40051 511 aa9.83□□□□□ -0.84
LSR1LSR1 RPN11P43588 306 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 PTK2P47116 818 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 CUE3P53137 624 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 FAR11P53917 953 aa9.83□□□□□ -0.84
LSR1LSR1 RAT1Q02792 1006 aaKnown RBP9.83□□□□□ -0.84
LSR1LSR1 TFC6Q06339 672 aa9.83□□□□□ -0.84
LSR1LSR1 ARP8Q12386 881 aaKnown RBP RIP-Chip data9.83□□□□□ -0.84not detected
LSR1LSR1 CYB2P00175 591 aa9.82□□□□□ -0.84
LSR1LSR1 GEF1P37020 779 aa9.82□□□□□ -0.84
LSR1LSR1 NUG1P40010 520 aaKnown RBP9.82□□□□□ -0.84
LSR1LSR1 RPS15Q01855 142 aaKnown RBP9.82□□□□□ -0.84
LSR1LSR1 TMA16Q08687 178 aa9.82□□□□□ -0.84
LSR1LSR1 GET3Q12154 354 aaKnown RBP9.82□□□□□ -0.84
LSR1LSR1 SFI1Q12369 946 aa9.82□□□□□ -0.84
LSR1LSR1 DPH6Q12429 685 aa9.82□□□□□ -0.84
LSR1LSR1 JSN1P47135 1091 aaKnown RBP RIP-Chip data9.81□□□□□ -0.84not detected
LSR1LSR1 COG4Q06096 861 aa9.81□□□□□ -0.84
LSR1LSR1 LTV1P34078 463 aa9.8□□□□□ -0.84
LSR1LSR1 YHL050CP38721 697 aa9.8□□□□□ -0.84
LSR1LSR1 SPL2P38839 148 aa9.8□□□□□ -0.84
LSR1LSR1 YFR006WP43590 535 aa9.8□□□□□ -0.84
LSR1LSR1 VPS75P53853 264 aa9.8□□□□□ -0.84
LSR1LSR1 UFD2P54860 961 aa9.8□□□□□ -0.84
LSR1LSR1 APL4Q12028 832 aa9.8□□□□□ -0.84
LSR1LSR1 MCM3P24279 971 aaKnown RBP9.79□□□□□ -0.84
LSR1LSR1 SPC110P32380 944 aa9.79□□□□□ -0.84
LSR1LSR1 MYO3P36006 1272 aa9.79□□□□□ -0.84
LSR1LSR1 RRP8P38961 392 aaKnown RBP9.79□□□□□ -0.84
LSR1LSR1 ALD2P47771 506 aa9.79□□□□□ -0.84
LSR1LSR1 PTC5Q12511 572 aa9.79□□□□□ -0.84
LSR1LSR1 FLO1P32768 1537 aa9.78□□□□□ -0.84
LSR1LSR1 PET111P08468 800 aa9.78□□□□□ -0.84
LSR1LSR1 PHO13P19881 312 aa9.78□□□□□ -0.84
LSR1LSR1 CDC15P27636 974 aa9.78□□□□□ -0.84
LSR1LSR1 ANP1P32629 500 aa9.78□□□□□ -0.84
LSR1LSR1 PCH2P38126 564 aa9.78□□□□□ -0.84
LSR1LSR1 YIL055CP40523 627 aaKnown RBP9.78□□□□□ -0.84
LSR1LSR1 SYF1Q04048 859 aaPredicted RBP9.78□□□□□ -0.84
LSR1LSR1 BMH1P29311 267 aaKnown RBP9.77□□□□□ -0.85
LSR1LSR1 ASF1P32447 279 aa9.77□□□□□ -0.85
LSR1LSR1 RXT2P38255 430 aa9.77□□□□□ -0.85
LSR1LSR1 CIN4P39110 191 aa9.77□□□□□ -0.85
LSR1LSR1 DIB1Q06819 143 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 5,963 RNA–protein pairs in 37.4 ms