RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 KIF7Q2M1P5 1343 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 ZSCAN20P17040 1043 aaPredicted RBP8.75□□□□□ -1.01
CASC19-243ENST00000641588 GOPCQ9HD26 462 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
CASC19-243ENST00000641588 ERBB4Q15303 1308 aa8.75□□□□□ -1.01
CASC19-243ENST00000641588 EIF3AQ14152 1382 aaKnown RBP8.74□□□□□ -1.01
CASC19-243ENST00000641588 TOP2BQ02880 1626 aa8.74□□□□□ -1.01
CASC19-243ENST00000641588 IBTKQ9P2D0 1353 aaPredicted RBP8.74□□□□□ -1.01
CASC19-243ENST00000641588 SSTR3P32745 418 aaPredicted RBP8.74□□□□□ -1.01
CASC19-243ENST00000641588 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
CASC19-243ENST00000641588 TMEM51Q9NW97 253 aa8.74□□□□□ -1.01
CASC19-243ENST00000641588 CFAP43Q8NDM7 1665 aa8.73□□□□□ -1.01
CASC19-243ENST00000641588 PRSS12P56730 875 aa8.73□□□□□ -1.01
CASC19-243ENST00000641588 TEX2Q8IWB9 1127 aa8.73□□□□□ -1.01
CASC19-243ENST00000641588 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
CASC19-243ENST00000641588 PTPN23Q9H3S7 1636 aa8.72□□□□□ -1.01
CASC19-243ENST00000641588 KIF15Q9NS87 1388 aa8.72□□□□□ -1.01
CASC19-243ENST00000641588 MYBBP1AQ9BQG0 1328 aaKnown RBP8.72□□□□□ -1.01
CASC19-243ENST00000641588 BRD2P25440 801 aaKnown RBP8.72□□□□□ -1.01
CASC19-243ENST00000641588 SASS6Q6UVJ0 657 aa8.72□□□□□ -1.01
CASC19-243ENST00000641588 CDCA7LQ96GN5 454 aa8.72□□□□□ -1.01
CASC19-243ENST00000641588 CRBNQ96SW2 442 aa8.72□□□□□ -1.01
CASC19-243ENST00000641588 USP19O94966 1318 aa8.71□□□□□ -1.01
CASC19-243ENST00000641588 COL9A1P20849 921 aa8.71□□□□□ -1.01
CASC19-243ENST00000641588 CHMP4BQ9H444 224 aaKnown RBP8.71□□□□□ -1.01
CASC19-243ENST00000641588 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.01
CASC19-243ENST00000641588 RBM25P49756 843 aaKnown RBP8.7□□□□□ -1.02
CASC19-243ENST00000641588 FAM198AQ9UFP1 575 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 ZHX1Q9UKY1 873 aaPredicted RBP8.7□□□□□ -1.02
CASC19-243ENST00000641588 NOL7Q9UMY1 257 aaKnown RBP8.7□□□□□ -1.02
CASC19-243ENST00000641588 NAIPQ13075 1403 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 KIF27Q86VH2 1401 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 BIVM-ERCC5R4GMW8 1640 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
CASC19-243ENST00000641588 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 UQCRHP07919 91 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
CASC19-243ENST00000641588 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
CASC19-243ENST00000641588 AQRO60306 1485 aaKnown RBP eCLIP8.69□□□□□ -1.02
CASC19-243ENST00000641588 PSDA5PKW4 1024 aaPredicted RBP8.69□□□□□ -1.02
CASC19-243ENST00000641588 CDK11BP21127 795 aaKnown RBP8.69□□□□□ -1.02
CASC19-243ENST00000641588 HMGN5P82970 282 aaKnown RBP8.69□□□□□ -1.02
CASC19-243ENST00000641588 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
CASC19-243ENST00000641588 GBP4Q96PP9 640 aa8.69□□□□□ -1.02
CASC19-243ENST00000641588 TSPYL1Q9H0U9 437 aa8.69□□□□□ -1.02
CASC19-243ENST00000641588 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
CASC19-243ENST00000641588 HECW1Q76N89 1606 aa8.69□□□□□ -1.02
CASC19-243ENST00000641588 FGD6Q6ZV73 1430 aa8.68□□□□□ -1.02
CASC19-243ENST00000641588 FAM193AP78312 1265 aa8.68□□□□□ -1.02
CASC19-243ENST00000641588 RBM46Q8TBY0 533 aaKnown RBP8.68□□□□□ -1.02
CASC19-243ENST00000641588 PRIMPOLQ96LW4 560 aa8.68□□□□□ -1.02
CASC19-243ENST00000641588 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
CASC19-243ENST00000641588 NINLQ9Y2I6 1382 aa8.68□□□□□ -1.02
CASC19-243ENST00000641588 DNAJC2Q99543 621 aaKnown RBP8.67□□□□□ -1.02
CASC19-243ENST00000641588 SLKQ9H2G2 1235 aaPredicted RBP8.67□□□□□ -1.02
CASC19-243ENST00000641588 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
CASC19-243ENST00000641588 PPP1R3GB7ZBB8 358 aa8.66□□□□□ -1.02
CASC19-243ENST00000641588 SNPHO15079 494 aa8.66□□□□□ -1.02
CASC19-243ENST00000641588 HOXB1P14653 301 aaPredicted RBP8.66□□□□□ -1.02
CASC19-243ENST00000641588 NLRP13Q86W25 1043 aa8.66□□□□□ -1.02
CASC19-243ENST00000641588 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
CASC19-243ENST00000641588 CUX1P39880 1505 aa8.65□□□□□ -1.02
CASC19-243ENST00000641588 PTPREP23469 700 aa8.65□□□□□ -1.02
CASC19-243ENST00000641588 GTF2F1P35269 517 aaKnown RBP eCLIP8.65□□□□□ -1.02
CASC19-243ENST00000641588 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
CASC19-243ENST00000641588 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
CASC19-243ENST00000641588 L3MBTL2Q969R5 705 aa8.65□□□□□ -1.02
CASC19-243ENST00000641588 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
CASC19-243ENST00000641588 FYCO1Q9BQS8 1478 aa8.65□□□□□ -1.02
CASC19-243ENST00000641588 CCDC66A2RUB6 948 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 C3orf80F5H4A9 247 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 HSP90AB1P08238 724 aaKnown RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 DNTTIP2Q5QJE6 756 aaKnown RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 CREBRFQ8IUR6 639 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 EYA1Q99502 592 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 GZF1Q9H116 711 aaPredicted RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 BCCIPQ9P287 314 aaKnown RBP eCLIP8.64□□□□□ -1.03
CASC19-243ENST00000641588 ZKSCAN5Q9Y2L8 839 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 RPRD2Q5VT52 1461 aaKnown RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 BLMP54132 1417 aaPredicted RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 ARHGAP31Q2M1Z3 1444 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 RCCD1A6NED2 376 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 GABPB1Q06547 395 aaPredicted RBP8.64□□□□□ -1.03
CASC19-243ENST00000641588 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 CLEC17AQ6ZS10 378 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 MYRIPQ8NFW9 859 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 PDLIM2Q96JY6 352 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 FEZ1Q99689 392 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
CASC19-243ENST00000641588 KIAA1107Q9UPP5 1409 aa8.63□□□□□ -1.03
CASC19-243ENST00000641588 GOLGA6L22H0YM25 854 aa8.63□□□□□ -1.03
CASC19-243ENST00000641588 IRX3P78415 501 aaPredicted RBP8.63□□□□□ -1.03
CASC19-243ENST00000641588 FLIIQ13045 1269 aa8.63□□□□□ -1.03
CASC19-243ENST00000641588 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
CASC19-243ENST00000641588 ZNF830Q96NB3 372 aaPredicted RBP8.63□□□□□ -1.03
CASC19-243ENST00000641588 POLR3EQ9NVU0 708 aa8.63□□□□□ -1.03
CASC19-243ENST00000641588 CTTNBP2Q8WZ74 1663 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms