RNA–Protein interactions for RNA: ENST00000641588.1

CASC19-243, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-243ENST00000641588 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
CASC19-243ENST00000641588 CHIC1Q5VXU3 224 aa18.81■□□□□ 0.6
CASC19-243ENST00000641588 PHF23Q9BUL5 403 aaPredicted RBP16.63■□□□□ 0.25
CASC19-243ENST00000641588 SENP3Q9H4L4 574 aaPredicted RBP15.88■□□□□ 0.13
CASC19-243ENST00000641588 POTEDQ86YR6 584 aa15.73■□□□□ 0.11
CASC19-243ENST00000641588 PLPPR3Q6T4P5 718 aa15.46■□□□□ 0.07
CASC19-243ENST00000641588 FOXD1Q16676 465 aa14.71□□□□□ -0.05
CASC19-243ENST00000641588 ADRA2BP18089 450 aa14.54□□□□□ -0.08
CASC19-243ENST00000641588 PPP6R1Q9UPN7 881 aa14.54□□□□□ -0.08
CASC19-243ENST00000641588 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
CASC19-243ENST00000641588 KCNA4P22459 653 aa13.9□□□□□ -0.18
CASC19-243ENST00000641588 PPP4R3CPQ6ZMV5 832 aa13.69□□□□□ -0.22
CASC19-243ENST00000641588 EHMT2Q96KQ7 1210 aa13.46□□□□□ -0.25
CASC19-243ENST00000641588 MSH5O43196 834 aa13.44□□□□□ -0.26
CASC19-243ENST00000641588 NCBP3Q53F19 620 aaKnown RBP13.44□□□□□ -0.26
CASC19-243ENST00000641588 SLC4A1APQ9BWU0 796 aaKnown RBP13.3□□□□□ -0.28
CASC19-243ENST00000641588 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
CASC19-243ENST00000641588 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
CASC19-243ENST00000641588 CNKSR2Q8WXI2 1034 aa13.19□□□□□ -0.3
CASC19-243ENST00000641588 CSRNP3Q8WYN3 585 aa13.09□□□□□ -0.31
CASC19-243ENST00000641588 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
CASC19-243ENST00000641588 ZBTB22O15209 634 aa12.83□□□□□ -0.36
CASC19-243ENST00000641588 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
CASC19-243ENST00000641588 DNAJC5BQ9UF47 199 aa12.79□□□□□ -0.36
CASC19-243ENST00000641588 DMRT2Q9Y5R5 561 aa12.76□□□□□ -0.37
CASC19-243ENST00000641588 HOXD11P31277 338 aaPredicted RBP12.67□□□□□ -0.38
CASC19-243ENST00000641588 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
CASC19-243ENST00000641588 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
CASC19-243ENST00000641588 SLC4A2P04920 1241 aa12.44□□□□□ -0.42
CASC19-243ENST00000641588 PELP1Q8IZL8 1130 aaKnown RBP12.24□□□□□ -0.45
CASC19-243ENST00000641588 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
CASC19-243ENST00000641588 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
CASC19-243ENST00000641588 ATXN8OSP0DMR3 200 aa12.15□□□□□ -0.46
CASC19-243ENST00000641588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.07□□□□□ -0.48
CASC19-243ENST00000641588 POTEHQ6S545 545 aa12.06□□□□□ -0.48
CASC19-243ENST00000641588 MYT1Q01538 1121 aa12.03□□□□□ -0.48
CASC19-243ENST00000641588 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
CASC19-243ENST00000641588 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
CASC19-243ENST00000641588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
CASC19-243ENST00000641588 FKBP8Q14318 412 aa11.8□□□□□ -0.52
CASC19-243ENST00000641588 NISCHQ9Y2I1 1504 aa11.77□□□□□ -0.53
CASC19-243ENST00000641588 HRCP23327 699 aa11.69□□□□□ -0.54
CASC19-243ENST00000641588 APLP2Q06481 763 aa11.65□□□□□ -0.54
CASC19-243ENST00000641588 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
CASC19-243ENST00000641588 RTN4Q9NQC3 1192 aaKnown RBP11.54□□□□□ -0.56
CASC19-243ENST00000641588 RNF39Q9H2S5 420 aa11.51□□□□□ -0.57
CASC19-243ENST00000641588 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 TTBK1Q5TCY1 1321 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
CASC19-243ENST00000641588 TRHP20396 242 aaPredicted RBP11.46□□□□□ -0.57
CASC19-243ENST00000641588 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
CASC19-243ENST00000641588 CAPN15O75808 1086 aa11.4□□□□□ -0.59
CASC19-243ENST00000641588 C1QBPQ07021 282 aaKnown RBP11.38□□□□□ -0.59
CASC19-243ENST00000641588 POLA2Q14181 598 aa11.38□□□□□ -0.59
CASC19-243ENST00000641588 SPDYE4A6NLX3 237 aa11.35□□□□□ -0.59
CASC19-243ENST00000641588 FBLN2P98095 1184 aa11.34□□□□□ -0.59
CASC19-243ENST00000641588 ABCB7O75027 752 aa11.25□□□□□ -0.61
CASC19-243ENST00000641588 PROM2Q8N271 834 aa11.24□□□□□ -0.61
CASC19-243ENST00000641588 FBXO3Q9UK99 471 aa11.22□□□□□ -0.61
CASC19-243ENST00000641588 ZBTB12Q9Y330 459 aaPredicted RBP11.18□□□□□ -0.62
CASC19-243ENST00000641588 SLC24A1O60721 1099 aa11.13□□□□□ -0.63
CASC19-243ENST00000641588 DSG3P32926 999 aa11.11□□□□□ -0.63
CASC19-243ENST00000641588 ZEB1P37275 1124 aaPredicted RBP11.1□□□□□ -0.63
CASC19-243ENST00000641588 VASPP50552 380 aaPredicted RBP11.08□□□□□ -0.64
CASC19-243ENST00000641588 PPARGC1BQ86YN6 1023 aaKnown RBP11.04□□□□□ -0.64
CASC19-243ENST00000641588 PCGF6Q9BYE7 350 aa11.02□□□□□ -0.65
CASC19-243ENST00000641588 DCAF1Q9Y4B6 1507 aa10.99□□□□□ -0.65
CASC19-243ENST00000641588 IFNLR1Q8IU57 520 aaPredicted RBP10.99□□□□□ -0.65
CASC19-243ENST00000641588 OSCARQ8IYS5 282 aa10.98□□□□□ -0.65
CASC19-243ENST00000641588 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
CASC19-243ENST00000641588 SPDYE2BA6NHP3 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SPDYE6P0CI01 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SPDYE2Q495Y8 402 aa10.94□□□□□ -0.66
CASC19-243ENST00000641588 SSUH2Q9Y2M2 353 aa10.92□□□□□ -0.66
CASC19-243ENST00000641588 ACIN1Q9UKV3 1341 aaKnown RBP10.88□□□□□ -0.67
CASC19-243ENST00000641588 CCDC180Q9P1Z9 1646 aa10.86□□□□□ -0.67
CASC19-243ENST00000641588 PABPN1Q86U42 306 aaKnown RBP eCLIP10.85□□□□□ -0.67
CASC19-243ENST00000641588 TRIM26Q12899 539 aaPredicted RBP10.84□□□□□ -0.67
CASC19-243ENST00000641588 STAG3Q9UJ98 1225 aa10.83□□□□□ -0.68
CASC19-243ENST00000641588 CENPBP07199 599 aaPredicted RBP10.82□□□□□ -0.68
CASC19-243ENST00000641588 PKD2Q13563 968 aa10.79□□□□□ -0.68
CASC19-243ENST00000641588 KLHL34Q8N239 644 aa10.79□□□□□ -0.68
CASC19-243ENST00000641588 MYO15BQ96JP2 1530 aa10.77□□□□□ -0.69
CASC19-243ENST00000641588 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
CASC19-243ENST00000641588 PLCD3Q8N3E9 789 aa10.74□□□□□ -0.69
CASC19-243ENST00000641588 MIER1Q8N108 512 aa10.72□□□□□ -0.69
CASC19-243ENST00000641588 DCAF8L2P0C7V8 631 aa10.71□□□□□ -0.69
CASC19-243ENST00000641588 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
CASC19-243ENST00000641588 BCL11AQ9H165 835 aa10.67□□□□□ -0.7
CASC19-243ENST00000641588 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
CASC19-243ENST00000641588 NEUROD1Q13562 356 aa10.66□□□□□ -0.7
CASC19-243ENST00000641588 PLCB2Q00722 1185 aa10.64□□□□□ -0.71
CASC19-243ENST00000641588 PLSCR2Q9NRY7 297 aa10.64□□□□□ -0.71
CASC19-243ENST00000641588 ECM2O94769 699 aaPredicted RBP10.63□□□□□ -0.71
CASC19-243ENST00000641588 PLEKHG5O94827 1062 aa10.58□□□□□ -0.72
CASC19-243ENST00000641588 CLSPNQ9HAW4 1339 aa10.57□□□□□ -0.72
CASC19-243ENST00000641588 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
CASC19-243ENST00000641588 SP7Q8TDD2 431 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms