RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 GOLGA6L19H0YKK7 550 aa24.87■■□□□ 1.57
PCSK6-217ENST00000618548 KDM6BO15054 1643 aa24.87■■□□□ 1.57
PCSK6-217ENST00000618548 SYNJ2O15056 1496 aa24.87■■□□□ 1.57
PCSK6-217ENST00000618548 PODXL2Q9NZ53 605 aa24.86■■□□□ 1.57
PCSK6-217ENST00000618548 HDAC1Q13547 482 aaPredicted RBP24.86■■□□□ 1.57
PCSK6-217ENST00000618548 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
PCSK6-217ENST00000618548 ZMYM4Q5VZL5 1548 aa24.85■■□□□ 1.57
PCSK6-217ENST00000618548 CCDC141Q6ZP82 1450 aa24.85■■□□□ 1.57
PCSK6-217ENST00000618548 MCM2P49736 904 aa24.85■■□□□ 1.57
PCSK6-217ENST00000618548 FKBP5Q13451 457 aaPredicted RBP24.85■■□□□ 1.57
PCSK6-217ENST00000618548 BECN2A8MW95 431 aa24.85■■□□□ 1.57
PCSK6-217ENST00000618548 HSP90B1P14625 803 aaKnown RBP24.84■■□□□ 1.57
PCSK6-217ENST00000618548 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
PCSK6-217ENST00000618548 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
PCSK6-217ENST00000618548 ZSCAN23Q3MJ62 389 aa24.83■■□□□ 1.57
PCSK6-217ENST00000618548 TNNT3P45378 269 aaPredicted RBP24.83■■□□□ 1.56
PCSK6-217ENST00000618548 RAB3GAP1Q15042 981 aa24.83■■□□□ 1.56
PCSK6-217ENST00000618548 SASS6Q6UVJ0 657 aa24.83■■□□□ 1.56
PCSK6-217ENST00000618548 URB2Q14146 1524 aaKnown RBP24.82■■□□□ 1.56
PCSK6-217ENST00000618548 GAS2L2Q8NHY3 880 aa24.82■■□□□ 1.56
PCSK6-217ENST00000618548 SNX21Q969T3 373 aa24.82■■□□□ 1.56
PCSK6-217ENST00000618548 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
PCSK6-217ENST00000618548 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
PCSK6-217ENST00000618548 NUCB1Q02818 461 aa24.81■■□□□ 1.56
PCSK6-217ENST00000618548 SMC5Q8IY18 1101 aa24.81■■□□□ 1.56
PCSK6-217ENST00000618548 CBX1P83916 185 aa24.81■■□□□ 1.56
PCSK6-217ENST00000618548 ZHX1Q9UKY1 873 aaPredicted RBP24.81■■□□□ 1.56
PCSK6-217ENST00000618548 SMARCA5O60264 1052 aaPredicted RBP24.81■■□□□ 1.56
PCSK6-217ENST00000618548 BICD2Q8TD16 824 aa24.81■■□□□ 1.56
PCSK6-217ENST00000618548 GPATCH3Q96I76 525 aa24.8■■□□□ 1.56
PCSK6-217ENST00000618548 ASXL1Q8IXJ9 1541 aa24.79■■□□□ 1.56
PCSK6-217ENST00000618548 SCAF11Q99590 1463 aaKnown RBP24.79■■□□□ 1.56
PCSK6-217ENST00000618548 KIF3AQ9Y496 699 aa24.79■■□□□ 1.56
PCSK6-217ENST00000618548 MAGI3Q5TCQ9 1506 aa24.79■■□□□ 1.56
PCSK6-217ENST00000618548 OFD1O75665 1012 aa24.78■■□□□ 1.56
PCSK6-217ENST00000618548 UPF3BQ9BZI7 483 aaKnown RBP24.78■■□□□ 1.56
PCSK6-217ENST00000618548 GDPD2Q9HCC8 539 aa24.78■■□□□ 1.56
PCSK6-217ENST00000618548 H3BQV1 296 aa24.78■■□□□ 1.56
PCSK6-217ENST00000618548 IFFO2Q5TF58 517 aa24.78■■□□□ 1.56
PCSK6-217ENST00000618548 CARD14Q9BXL6 1004 aa24.78■■□□□ 1.56
PCSK6-217ENST00000618548 ZKSCAN1P17029 563 aaPredicted RBP24.77■■□□□ 1.56
PCSK6-217ENST00000618548 NUP153P49790 1475 aaKnown RBP24.77■■□□□ 1.56
PCSK6-217ENST00000618548 COL17A1Q9UMD9 1497 aaPredicted RBP24.77■■□□□ 1.56
PCSK6-217ENST00000618548 TRIM5Q9C035 493 aa24.77■■□□□ 1.56
PCSK6-217ENST00000618548 PRIM1P49642 420 aaKnown RBP24.76■■□□□ 1.55
PCSK6-217ENST00000618548 LTV1Q96GA3 475 aaPredicted RBP24.76■■□□□ 1.55
PCSK6-217ENST00000618548 ARHGEF12Q9NZN5 1544 aa24.76■■□□□ 1.55
PCSK6-217ENST00000618548 DNAJC5BQ9UF47 199 aa24.76■■□□□ 1.55
PCSK6-217ENST00000618548 WDR33Q9C0J8 1336 aaKnown RBP24.76■■□□□ 1.55
PCSK6-217ENST00000618548 LMOD2Q6P5Q4 547 aa24.76■■□□□ 1.55
PCSK6-217ENST00000618548 USP25Q9UHP3 1055 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 ALDH1L2Q3SY69 923 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 ZNF428Q96B54 188 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 TSPYL4Q9UJ04 414 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 KIF14Q15058 1648 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 AMPHP49418 695 aa24.75■■□□□ 1.55
PCSK6-217ENST00000618548 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.75■■□□□ 1.55
PCSK6-217ENST00000618548 LETM1O95202 739 aaPredicted RBP24.74■■□□□ 1.55
PCSK6-217ENST00000618548 SLC4A2P04920 1241 aa24.74■■□□□ 1.55
PCSK6-217ENST00000618548 PIK3C2GO75747 1445 aa24.74■■□□□ 1.55
PCSK6-217ENST00000618548 RUFY2Q8WXA3 655 aa24.73■■□□□ 1.55
PCSK6-217ENST00000618548 FCHSD2O94868 740 aa24.73■■□□□ 1.55
PCSK6-217ENST00000618548 ANTXR1Q9H6X2 564 aa24.73■■□□□ 1.55
PCSK6-217ENST00000618548 CABP1Q9NZU7 370 aa24.73■■□□□ 1.55
PCSK6-217ENST00000618548 FAM184AQ8NB25 1140 aa24.72■■□□□ 1.55
PCSK6-217ENST00000618548 FBXW7Q969H0 707 aa24.72■■□□□ 1.55
PCSK6-217ENST00000618548 DYNC1I1O14576 645 aa24.72■■□□□ 1.55
PCSK6-217ENST00000618548 EIF2S2P20042 333 aaKnown RBP24.72■■□□□ 1.55
PCSK6-217ENST00000618548 PRAM1Q96QH2 718 aa24.72■■□□□ 1.55
PCSK6-217ENST00000618548 TPD52L1Q16890 204 aaPredicted RBP24.72■■□□□ 1.55
PCSK6-217ENST00000618548 PDCL2Q8N4E4 241 aa24.72■■□□□ 1.55
PCSK6-217ENST00000618548 FSD2A1L4K1 749 aa24.71■■□□□ 1.55
PCSK6-217ENST00000618548 GAS2L3Q86XJ1 694 aa24.71■■□□□ 1.55
PCSK6-217ENST00000618548 ZKSCAN5Q9Y2L8 839 aa24.71■■□□□ 1.55
PCSK6-217ENST00000618548 GCC2Q8IWJ2 1684 aa24.71■■□□□ 1.55
PCSK6-217ENST00000618548 SF3A1Q15459 793 aaKnown RBP24.71■■□□□ 1.55
PCSK6-217ENST00000618548 TPM3P06753 285 aa24.7■■□□□ 1.55
PCSK6-217ENST00000618548 RPAP2Q8IXW5 612 aaPredicted RBP24.7■■□□□ 1.55
PCSK6-217ENST00000618548 TPM4P67936 248 aa24.7■■□□□ 1.54
PCSK6-217ENST00000618548 ZNF830Q96NB3 372 aaPredicted RBP24.7■■□□□ 1.54
PCSK6-217ENST00000618548 EXOC6BQ9Y2D4 811 aa24.7■■□□□ 1.54
PCSK6-217ENST00000618548 NPHP1O15259 732 aa24.7■■□□□ 1.54
PCSK6-217ENST00000618548 INSRP06213 1382 aa24.69■■□□□ 1.54
PCSK6-217ENST00000618548 DNMT1P26358 1616 aaKnown RBP24.69■■□□□ 1.54
PCSK6-217ENST00000618548 SURF6O75683 361 aaKnown RBP24.69■■□□□ 1.54
PCSK6-217ENST00000618548 MCM5P33992 734 aa24.69■■□□□ 1.54
PCSK6-217ENST00000618548 DCTN1Q14203 1278 aa24.69■■□□□ 1.54
PCSK6-217ENST00000618548 NFE2L2Q16236 605 aa24.69■■□□□ 1.54
PCSK6-217ENST00000618548 GNL2Q13823 731 aaKnown RBP24.68■■□□□ 1.54
PCSK6-217ENST00000618548 LRSAM1Q6UWE0 723 aa24.68■■□□□ 1.54
PCSK6-217ENST00000618548 ZBTB40Q9NUA8 1239 aa24.68■■□□□ 1.54
PCSK6-217ENST00000618548 MAP4K4O95819 1239 aaPredicted RBP24.67■■□□□ 1.54
PCSK6-217ENST00000618548 RBM25P49756 843 aaKnown RBP24.67■■□□□ 1.54
PCSK6-217ENST00000618548 POLR3AO14802 1390 aaPredicted RBP24.67■■□□□ 1.54
PCSK6-217ENST00000618548 USP19O94966 1318 aa24.67■■□□□ 1.54
PCSK6-217ENST00000618548 GNAI2P04899 355 aa24.66■■□□□ 1.54
PCSK6-217ENST00000618548 KDM5BQ9UGL1 1544 aa24.66■■□□□ 1.54
PCSK6-217ENST00000618548 CCDC192P0DO97 292 aa24.66■■□□□ 1.54
PCSK6-217ENST00000618548 LRRCC1Q9C099 1032 aa24.66■■□□□ 1.54
PCSK6-217ENST00000618548 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms