RNA–Protein interactions for RNA: ENST00000583226.1

NCOR1-223, Transcript of nuclear receptor corepressor 1, human

TSL 5

Gene NCOR1, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCOR1-223	ENST00000583226	PTGDR	Q13258	359 aa		12.87	□□□□□ -0.35
NCOR1-223	ENST00000583226	FAM98C	Q17RN3	349 aa	Known RBP	12.87	□□□□□ -0.35
NCOR1-223	ENST00000583226	THSD4	Q6ZMP0	1018 aa		12.87	□□□□□ -0.35
NCOR1-223	ENST00000583226	CLTC	Q00610	1675 aa	Known RBP	12.86	□□□□□ -0.35
NCOR1-223	ENST00000583226	NUDT18	Q6ZVK8	323 aa		12.86	□□□□□ -0.35
NCOR1-223	ENST00000583226	TATDN2	Q93075	761 aa		12.86	□□□□□ -0.35
NCOR1-223	ENST00000583226	PREX2	Q70Z35	1606 aa		12.86	□□□□□ -0.35
NCOR1-223	ENST00000583226	DNMT1	P26358	1616 aa	Known RBP	12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	C3orf80	F5H4A9	247 aa		12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	BCAM	P50895	628 aa		12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	EEA1	Q15075	1411 aa		12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	SAMD9L	Q8IVG5	1584 aa		12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	NEURL4	Q96JN8	1562 aa		12.85	□□□□□ -0.35
NCOR1-223	ENST00000583226	FCHSD2	O94868	740 aa		12.84	□□□□□ -0.35
NCOR1-223	ENST00000583226	RBM27	Q9P2N5	1060 aa	Known RBP	12.84	□□□□□ -0.35
NCOR1-223	ENST00000583226	POLR1A	O95602	1720 aa	Predicted RBP	12.83	□□□□□ -0.36
NCOR1-223	ENST00000583226	PLXNC1	O60486	1568 aa		12.83	□□□□□ -0.36
NCOR1-223	ENST00000583226	VWDE	Q8N2E2	1590 aa		12.83	□□□□□ -0.36
NCOR1-223	ENST00000583226	TULP1	O00294	542 aa	Predicted RBP	12.83	□□□□□ -0.36
NCOR1-223	ENST00000583226	SPAG9	O60271	1321 aa	Known RBP	12.83	□□□□□ -0.36
NCOR1-223	ENST00000583226	ANKLE2	Q86XL3	938 aa		12.81	□□□□□ -0.36
NCOR1-223	ENST00000583226	A2M	P01023	1474 aa		12.8	□□□□□ -0.36
NCOR1-223	ENST00000583226	GGT6	Q6P531	493 aa		12.8	□□□□□ -0.36
NCOR1-223	ENST00000583226	LRCH3	Q96II8	777 aa		12.8	□□□□□ -0.36
NCOR1-223	ENST00000583226	MED14	O60244	1454 aa		12.79	□□□□□ -0.36
NCOR1-223	ENST00000583226	TTC13	Q8NBP0	860 aa		12.79	□□□□□ -0.36
NCOR1-223	ENST00000583226	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.79	□□□□□ -0.36
NCOR1-223	ENST00000583226	ATP7A	Q04656	1500 aa		12.78	□□□□□ -0.36
NCOR1-223	ENST00000583226	SRCAP	Q6ZRS2	3230 aa		12.78	□□□□□ -0.36
NCOR1-223	ENST00000583226	SOWAHB	A6NEL2	793 aa		12.78	□□□□□ -0.36
NCOR1-223	ENST00000583226	FAM161A	Q3B820	660 aa		12.78	□□□□□ -0.36
NCOR1-223	ENST00000583226	SAMD7	Q7Z3H4	446 aa		12.78	□□□□□ -0.36
NCOR1-223	ENST00000583226	RNF40	O75150	1001 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	POTEA	Q6S8J7	498 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	GPIHBP1	Q8IV16	184 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	TNR	Q92752	1358 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	ARHGAP35	Q9NRY4	1499 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	LRRC7	Q96NW7	1537 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	DEPDC5	O75140	1603 aa		12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	RNF17	Q9BXT8	1623 aa	Known RBP	12.77	□□□□□ -0.37
NCOR1-223	ENST00000583226	CDC42BPA	Q5VT25	1732 aa		12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	NPHP4	O75161	1426 aa	Predicted RBP	12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	KIAA1107	Q9UPP5	1409 aa		12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	SYCP2	Q9BX26	1530 aa		12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	INO80	Q9ULG1	1556 aa	Predicted RBP	12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	LRRIQ1	Q96JM4	1722 aa		12.76	□□□□□ -0.37
NCOR1-223	ENST00000583226	HDGF	P51858	240 aa	Known RBP	12.75	□□□□□ -0.37
NCOR1-223	ENST00000583226	HNRNPM	P52272	730 aa	Known RBP eCLIP	12.75	□□□□□ -0.37
NCOR1-223	ENST00000583226	ZNF777	Q9ULD5	760 aa	Predicted RBP	12.75	□□□□□ -0.37
NCOR1-223	ENST00000583226	HPS5	Q9UPZ3	1129 aa		12.75	□□□□□ -0.37
NCOR1-223	ENST00000583226	HIC1	Q14526	733 aa		12.74	□□□□□ -0.37
NCOR1-223	ENST00000583226	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.74	□□□□□ -0.37
NCOR1-223	ENST00000583226	SYNM	O15061	1565 aa		12.73	□□□□□ -0.37
NCOR1-223	ENST00000583226	WBP1L	Q9NX94	342 aa		12.73	□□□□□ -0.37
NCOR1-223	ENST00000583226	PZP	P20742	1482 aa		12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	CCDC18	Q5T9S5	1454 aa		12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	PLEKHH2	Q8IVE3	1493 aa		12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	NLRP1	Q9C000	1473 aa		12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	PLA2G2E	Q9NZK7	142 aa		12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	GPATCH8	Q9UKJ3	1502 aa	Known RBP	12.72	□□□□□ -0.37
NCOR1-223	ENST00000583226	STRCP1	A6NGW2	1772 aa		12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	IQGAP1	P46940	1657 aa		12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	GNPAT	O15228	680 aa		12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	FECH	P22830	423 aa		12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	RBM46	Q8TBY0	533 aa	Known RBP	12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	TSR3	Q9UJK0	312 aa	Known RBP	12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	ADGRG1	Q9Y653	693 aa		12.71	□□□□□ -0.37
NCOR1-223	ENST00000583226	FAM135A	Q9P2D6	1515 aa		12.71	□□□□□ -0.38
NCOR1-223	ENST00000583226	ADGB	Q8N7X0	1667 aa		12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	UGGT1	Q9NYU2	1555 aa		12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	PPP4C	P60510	307 aa		12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	SWT1	Q5T5J6	900 aa	Known RBP	12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	EYA1	Q99502	592 aa		12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	MIA2	Q96PC5	1412 aa		12.7	□□□□□ -0.38
NCOR1-223	ENST00000583226	FAM135B	Q49AJ0	1406 aa		12.69	□□□□□ -0.38
NCOR1-223	ENST00000583226	CASKIN1	Q8WXD9	1431 aa		12.69	□□□□□ -0.38
NCOR1-223	ENST00000583226	GPR37	O15354	613 aa		12.68	□□□□□ -0.38
NCOR1-223	ENST00000583226	SLC24A1	O60721	1099 aa		12.68	□□□□□ -0.38
NCOR1-223	ENST00000583226	UBTF	P17480	764 aa	Known RBP	12.68	□□□□□ -0.38
NCOR1-223	ENST00000583226	DHX29	Q7Z478	1369 aa	Known RBP	12.68	□□□□□ -0.38
NCOR1-223	ENST00000583226	CFDP1	Q9UEE9	299 aa	Predicted RBP	12.67	□□□□□ -0.38
NCOR1-223	ENST00000583226	KDM5D	Q9BY66	1539 aa		12.67	□□□□□ -0.38
NCOR1-223	ENST00000583226	RTEL1-TNFRSF6B	F6WH68	1400 aa		12.65	□□□□□ -0.38
NCOR1-223	ENST00000583226	SETD1A	O15047	1707 aa	Known RBP	12.65	□□□□□ -0.38
NCOR1-223	ENST00000583226	WASHC2C	Q9Y4E1	1318 aa		12.64	□□□□□ -0.39
NCOR1-223	ENST00000583226	RCCD1	A6NED2	376 aa		12.64	□□□□□ -0.39
NCOR1-223	ENST00000583226	DNAJB2	P25686	324 aa		12.64	□□□□□ -0.39
NCOR1-223	ENST00000583226	SLC4A3	P48751	1232 aa		12.64	□□□□□ -0.39
NCOR1-223	ENST00000583226	KIF3B	O15066	747 aa		12.63	□□□□□ -0.39
NCOR1-223	ENST00000583226	OAT	P04181	439 aa		12.63	□□□□□ -0.39
NCOR1-223	ENST00000583226	LMOD2	Q6P5Q4	547 aa		12.63	□□□□□ -0.39
NCOR1-223	ENST00000583226	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.63	□□□□□ -0.39
NCOR1-223	ENST00000583226	ZC3H13	Q5T200	1668 aa	Known RBP	12.62	□□□□□ -0.39
NCOR1-223	ENST00000583226	SLF2	Q8IX21	1173 aa		12.62	□□□□□ -0.39
NCOR1-223	ENST00000583226	MBD5	Q9P267	1494 aa		12.61	□□□□□ -0.39
NCOR1-223	ENST00000583226	CCNB3	Q8WWL7	1395 aa		12.61	□□□□□ -0.39
NCOR1-223	ENST00000583226	XIRP1	Q702N8	1843 aa	Known RBP	12.61	□□□□□ -0.39
NCOR1-223	ENST00000583226	NYAP1	Q6ZVC0	841 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms