RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 NSD2O96028 1365 aa21.45■■□□□ 1.02
PCDHB19P-201ENST00000570871 EVC2Q86UK5 1308 aa21.44■■□□□ 1.02
PCDHB19P-201ENST00000570871 NUTM2DQ5VT03 806 aaPredicted RBP21.44■■□□□ 1.02
PCDHB19P-201ENST00000570871 SENP3Q9H4L4 574 aaPredicted RBP21.44■■□□□ 1.02
PCDHB19P-201ENST00000570871 RPGRIP1LQ68CZ1 1315 aa21.43■■□□□ 1.02
PCDHB19P-201ENST00000570871 MYO5BQ9ULV0 1848 aa21.43■■□□□ 1.02
PCDHB19P-201ENST00000570871 FAM43AQ8N2R8 423 aa21.43■■□□□ 1.02
PCDHB19P-201ENST00000570871 EXOSC9Q06265 439 aaKnown RBP21.42■■□□□ 1.02
PCDHB19P-201ENST00000570871 PUS7Q96PZ0 661 aaKnown RBP21.42■■□□□ 1.02
PCDHB19P-201ENST00000570871 CABP2Q9NPB3 220 aa21.42■■□□□ 1.02
PCDHB19P-201ENST00000570871 SMC4Q9NTJ3 1288 aa21.42■■□□□ 1.02
PCDHB19P-201ENST00000570871 CT47B1P0C2W7 299 aaPredicted RBP21.41■■□□□ 1.02
PCDHB19P-201ENST00000570871 SPRYD3Q8NCJ5 442 aa21.41■■□□□ 1.02
PCDHB19P-201ENST00000570871 PIK3C2BO00750 1634 aa21.41■■□□□ 1.02
PCDHB19P-201ENST00000570871 TRIM27P14373 513 aa21.4■■□□□ 1.02
PCDHB19P-201ENST00000570871 SSH1Q8WYL5 1049 aa21.39■■□□□ 1.01
PCDHB19P-201ENST00000570871 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
PCDHB19P-201ENST00000570871 C22orf23Q9BZE7 217 aa21.39■■□□□ 1.01
PCDHB19P-201ENST00000570871 U2SURPO15042 1029 aaKnown RBP21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 TMPOP42166 694 aaKnown RBP21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 MFAP1P55081 439 aaKnown RBP21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 TRIM35Q9UPQ4 493 aa21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
PCDHB19P-201ENST00000570871 PRKCSHP14314 528 aaPredicted RBP21.37■■□□□ 1.01
PCDHB19P-201ENST00000570871 SAFB2Q14151 953 aaKnown RBP eCLIP21.37■■□□□ 1.01
PCDHB19P-201ENST00000570871 PLPPR3Q6T4P5 718 aa21.37■■□□□ 1.01
PCDHB19P-201ENST00000570871 DDX19BQ9UMR2 479 aa21.37■■□□□ 1.01
PCDHB19P-201ENST00000570871 L1TD1Q5T7N2 865 aaKnown RBP21.36■■□□□ 1.01
PCDHB19P-201ENST00000570871 ATF7IPQ6VMQ6 1270 aa21.36■■□□□ 1.01
PCDHB19P-201ENST00000570871 A0A1W2PP64 1363 aa21.36■■□□□ 1.01
PCDHB19P-201ENST00000570871 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
PCDHB19P-201ENST00000570871 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
PCDHB19P-201ENST00000570871 ABCC11Q96J66 1382 aa21.35■■□□□ 1.01
PCDHB19P-201ENST00000570871 CEBPAP49715 358 aaPredicted RBP21.35■■□□□ 1.01
PCDHB19P-201ENST00000570871 NEXMIFQ5QGS0 1516 aa21.35■■□□□ 1.01
PCDHB19P-201ENST00000570871 GGNBP2Q9H3C7 697 aa21.34■■□□□ 1.01
PCDHB19P-201ENST00000570871 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
PCDHB19P-201ENST00000570871 VGFO15240 615 aaPredicted RBP21.34■■□□□ 1.01
PCDHB19P-201ENST00000570871 MCM4P33991 863 aa21.34■■□□□ 1.01
PCDHB19P-201ENST00000570871 NOB1Q9ULX3 412 aaKnown RBP21.34■■□□□ 1.01
PCDHB19P-201ENST00000570871 SMC5Q8IY18 1101 aa21.33■■□□□ 1
PCDHB19P-201ENST00000570871 TMEM57Q8N5G2 664 aa21.32■■□□□ 1
PCDHB19P-201ENST00000570871 SLC52A1Q9NWF4 448 aa21.31■■□□□ 1
PCDHB19P-201ENST00000570871 CHMP5Q9NZZ3 219 aa21.31■■□□□ 1
PCDHB19P-201ENST00000570871 TMEM131LA2VDJ0 1609 aa21.31■■□□□ 1
PCDHB19P-201ENST00000570871 IL16Q14005 1332 aa21.3■■□□□ 1
PCDHB19P-201ENST00000570871 ANKRD26Q9UPS8 1709 aa21.3■■□□□ 1
PCDHB19P-201ENST00000570871 SRPK2P78362 688 aaKnown RBP21.3■■□□□ 1
PCDHB19P-201ENST00000570871 ARXQ96QS3 562 aa21.3■■□□□ 1
PCDHB19P-201ENST00000570871 ZBTB40Q9NUA8 1239 aa21.3■■□□□ 1
PCDHB19P-201ENST00000570871 RIPK4P57078 832 aa21.29■■□□□ 1
PCDHB19P-201ENST00000570871 STK26Q9P289 416 aa21.29■■□□□ 1
PCDHB19P-201ENST00000570871 SPATA31D1Q6ZQQ2 1576 aa21.29■■□□□ 1
PCDHB19P-201ENST00000570871 GZF1Q9H116 711 aaPredicted RBP21.28■■□□□ 1
PCDHB19P-201ENST00000570871 FYB1O15117 783 aa21.28■■□□□ 1
PCDHB19P-201ENST00000570871 XRCC6P12956 609 aaKnown RBP eCLIP21.28■■□□□ 1
PCDHB19P-201ENST00000570871 RRAGDQ9NQL2 400 aaPredicted RBP21.28■■□□□ 1
PCDHB19P-201ENST00000570871 FSD2A1L4K1 749 aa21.27■■□□□ 1
PCDHB19P-201ENST00000570871 GOLGA6L3A6NEY3 463 aa21.26■□□□□ 0.99
PCDHB19P-201ENST00000570871 EIF5BO60841 1220 aaKnown RBP21.26■□□□□ 0.99
PCDHB19P-201ENST00000570871 KIF16BQ96L93 1317 aa21.26■□□□□ 0.99
PCDHB19P-201ENST00000570871 HSCBQ8IWL3 235 aa21.25■□□□□ 0.99
PCDHB19P-201ENST00000570871 RSPH6AQ9H0K4 717 aa21.25■□□□□ 0.99
PCDHB19P-201ENST00000570871 IPO8O15397 1037 aaKnown RBP21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 NUCB1Q02818 461 aa21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 STAG3Q9UJ98 1225 aa21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 TRAK2O60296 914 aa21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 FER1L4A9Z1Z3 1794 aa21.24■□□□□ 0.99
PCDHB19P-201ENST00000570871 CD163L1Q9NR16 1453 aa21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 DIAPH1O60610 1272 aaKnown RBP21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 LNPKQ9C0E8 428 aa21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 TERF2IPQ9NYB0 399 aa21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 MINK1Q8N4C8 1332 aaPredicted RBP21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 MED14O60244 1454 aa21.23■□□□□ 0.99
PCDHB19P-201ENST00000570871 PTPRMP28827 1452 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 NCOA3Q9Y6Q9 1424 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 ATAD2Q6PL18 1390 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 RBM25P49756 843 aaKnown RBP21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 PANK2Q9BZ23 570 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 C3P01024 1663 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 ALDH1L2Q3SY69 923 aa21.21■□□□□ 0.99
PCDHB19P-201ENST00000570871 A2ML1A8K2U0 1454 aa21.2■□□□□ 0.98
PCDHB19P-201ENST00000570871 ZFYVE9O95405 1425 aa21.2■□□□□ 0.98
PCDHB19P-201ENST00000570871 PNPLA6Q8IY17 1366 aa21.2■□□□□ 0.98
PCDHB19P-201ENST00000570871 CHD1LQ86WJ1 897 aa21.19■□□□□ 0.98
PCDHB19P-201ENST00000570871 DDIT3P35638 169 aa21.19■□□□□ 0.98
PCDHB19P-201ENST00000570871 PRAM1Q96QH2 718 aa21.19■□□□□ 0.98
PCDHB19P-201ENST00000570871 TNRQ92752 1358 aa21.19■□□□□ 0.98
PCDHB19P-201ENST00000570871 PNNQ9H307 717 aaKnown RBP21.18■□□□□ 0.98
PCDHB19P-201ENST00000570871 LRRC7Q96NW7 1537 aa21.18■□□□□ 0.98
PCDHB19P-201ENST00000570871 KIF20BQ96Q89 1820 aa21.18■□□□□ 0.98
PCDHB19P-201ENST00000570871 SNX21Q969T3 373 aa21.17■□□□□ 0.98
PCDHB19P-201ENST00000570871 DDX11L8A8MPP1 907 aa21.16■□□□□ 0.98
PCDHB19P-201ENST00000570871 FCHSD2O94868 740 aa21.16■□□□□ 0.98
PCDHB19P-201ENST00000570871 BMP2KLQ5H9B9 411 aa21.15■□□□□ 0.98
PCDHB19P-201ENST00000570871 CDC42BPGQ6DT37 1551 aa21.15■□□□□ 0.98
PCDHB19P-201ENST00000570871 PRKAR2BP31323 418 aa21.15■□□□□ 0.98
PCDHB19P-201ENST00000570871 HDGFL2Q7Z4V5 671 aaPredicted RBP21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms