RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
PCDHB19P-201ENST00000570871 CCDC180Q9P1Z9 1646 aa30.05■■■□□ 2.4
PCDHB19P-201ENST00000570871 SHROOM4Q9ULL8 1493 aa29.41■■■□□ 2.3
PCDHB19P-201ENST00000570871 ZCCHC6Q5VYS8 1495 aaKnown RBP29.03■■■□□ 2.24
PCDHB19P-201ENST00000570871 SUPT5HO00267 1087 aaKnown RBP28.99■■■□□ 2.23
PCDHB19P-201ENST00000570871 DCAF8L2P0C7V8 631 aa28.89■■■□□ 2.21
PCDHB19P-201ENST00000570871 ABCC9O60706 1549 aa28.78■■■□□ 2.2
PCDHB19P-201ENST00000570871 DCAF1Q9Y4B6 1507 aa28.42■■■□□ 2.14
PCDHB19P-201ENST00000570871 MYO15BQ96JP2 1530 aa28.38■■■□□ 2.13
PCDHB19P-201ENST00000570871 CHIC1Q5VXU3 224 aa28.35■■■□□ 2.13
PCDHB19P-201ENST00000570871 HRCP23327 699 aa28.06■■■□□ 2.08
PCDHB19P-201ENST00000570871 NACADO15069 1562 aa28.01■■■□□ 2.08
PCDHB19P-201ENST00000570871 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
PCDHB19P-201ENST00000570871 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
PCDHB19P-201ENST00000570871 PCGF6Q9BYE7 350 aa27.82■■■□□ 2.04
PCDHB19P-201ENST00000570871 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
PCDHB19P-201ENST00000570871 UNC13AQ9UPW8 1703 aa27.48■■□□□ 1.99
PCDHB19P-201ENST00000570871 PPARGC1BQ86YN6 1023 aaKnown RBP27.45■■□□□ 1.99
PCDHB19P-201ENST00000570871 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
PCDHB19P-201ENST00000570871 TRIM26Q12899 539 aaPredicted RBP27.19■■□□□ 1.94
PCDHB19P-201ENST00000570871 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
PCDHB19P-201ENST00000570871 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
PCDHB19P-201ENST00000570871 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
PCDHB19P-201ENST00000570871 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
PCDHB19P-201ENST00000570871 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
PCDHB19P-201ENST00000570871 FAM9AQ8IZU1 332 aaPredicted RBP26.78■■□□□ 1.88
PCDHB19P-201ENST00000570871 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
PCDHB19P-201ENST00000570871 BAZ1AQ9NRL2 1556 aaPredicted RBP26.65■■□□□ 1.86
PCDHB19P-201ENST00000570871 WIZO95785 1651 aa26.65■■□□□ 1.86
PCDHB19P-201ENST00000570871 SMARCA4P51532 1647 aa26.62■■□□□ 1.85
PCDHB19P-201ENST00000570871 EHMT2Q96KQ7 1210 aa26.56■■□□□ 1.84
PCDHB19P-201ENST00000570871 EIF4G1Q04637 1599 aaKnown RBP26.29■■□□□ 1.8
PCDHB19P-201ENST00000570871 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
PCDHB19P-201ENST00000570871 TOP2AP11388 1531 aaKnown RBP26.19■■□□□ 1.78
PCDHB19P-201ENST00000570871 PEG3Q9GZU2 1588 aa26.18■■□□□ 1.78
PCDHB19P-201ENST00000570871 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
PCDHB19P-201ENST00000570871 SMARCA2P51531 1590 aa26.08■■□□□ 1.76
PCDHB19P-201ENST00000570871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.07■■□□□ 1.76
PCDHB19P-201ENST00000570871 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
PCDHB19P-201ENST00000570871 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PCDHB19P-201ENST00000570871 BAZ1BQ9UIG0 1483 aaKnown RBP26.03■■□□□ 1.76
PCDHB19P-201ENST00000570871 CCER1Q8TC90 406 aaPredicted RBP26■■□□□ 1.75
PCDHB19P-201ENST00000570871 CC2D2AQ9P2K1 1620 aa25.96■■□□□ 1.75
PCDHB19P-201ENST00000570871 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
PCDHB19P-201ENST00000570871 NCAPD3P42695 1498 aa25.91■■□□□ 1.74
PCDHB19P-201ENST00000570871 CEP162Q5TB80 1403 aa25.87■■□□□ 1.73
PCDHB19P-201ENST00000570871 PELP1Q8IZL8 1130 aaKnown RBP25.87■■□□□ 1.73
PCDHB19P-201ENST00000570871 SOGA1O94964 1423 aa25.84■■□□□ 1.73
PCDHB19P-201ENST00000570871 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
PCDHB19P-201ENST00000570871 TTBK1Q5TCY1 1321 aaPredicted RBP25.8■■□□□ 1.72
PCDHB19P-201ENST00000570871 TNIKQ9UKE5 1360 aa25.78■■□□□ 1.72
PCDHB19P-201ENST00000570871 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.71
PCDHB19P-201ENST00000570871 EEA1Q15075 1411 aa25.7■■□□□ 1.71
PCDHB19P-201ENST00000570871 ACIN1Q9UKV3 1341 aaKnown RBP25.7■■□□□ 1.7
PCDHB19P-201ENST00000570871 CSRNP3Q8WYN3 585 aa25.69■■□□□ 1.7
PCDHB19P-201ENST00000570871 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
PCDHB19P-201ENST00000570871 DNAJC5BQ9UF47 199 aa25.66■■□□□ 1.7
PCDHB19P-201ENST00000570871 NEUROD1Q13562 356 aa25.65■■□□□ 1.7
PCDHB19P-201ENST00000570871 UBTFP17480 764 aaKnown RBP25.63■■□□□ 1.69
PCDHB19P-201ENST00000570871 GOLGA3Q08378 1498 aa25.58■■□□□ 1.69
PCDHB19P-201ENST00000570871 CENPBP07199 599 aaPredicted RBP25.47■■□□□ 1.67
PCDHB19P-201ENST00000570871 GTF3C3Q9Y5Q9 886 aa25.42■■□□□ 1.66
PCDHB19P-201ENST00000570871 SYNJ1O43426 1573 aa25.41■■□□□ 1.66
PCDHB19P-201ENST00000570871 ZNF316A6NFI3 1004 aaPredicted RBP25.4■■□□□ 1.66
PCDHB19P-201ENST00000570871 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.66
PCDHB19P-201ENST00000570871 KIF21BO75037 1637 aa25.39■■□□□ 1.65
PCDHB19P-201ENST00000570871 CFTRP13569 1480 aa25.36■■□□□ 1.65
PCDHB19P-201ENST00000570871 CLIP1P30622 1438 aa25.3■■□□□ 1.64
PCDHB19P-201ENST00000570871 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
PCDHB19P-201ENST00000570871 NESP48681 1621 aa25.29■■□□□ 1.64
PCDHB19P-201ENST00000570871 HNRNPUL2Q1KMD3 747 aaKnown RBP25.29■■□□□ 1.64
PCDHB19P-201ENST00000570871 VPS8Q8N3P4 1428 aa25.24■■□□□ 1.63
PCDHB19P-201ENST00000570871 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
PCDHB19P-201ENST00000570871 PRDM2Q13029 1718 aa25.18■■□□□ 1.62
PCDHB19P-201ENST00000570871 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
PCDHB19P-201ENST00000570871 APLP2Q06481 763 aa25.11■■□□□ 1.61
PCDHB19P-201ENST00000570871 MIER1Q8N108 512 aa25.1■■□□□ 1.61
PCDHB19P-201ENST00000570871 CUX1P39880 1505 aa25.07■■□□□ 1.6
PCDHB19P-201ENST00000570871 RANGAP1P46060 587 aaPredicted RBP25.06■■□□□ 1.6
PCDHB19P-201ENST00000570871 FANCD2Q9BXW9 1451 aa25.05■■□□□ 1.6
PCDHB19P-201ENST00000570871 TOP2BQ02880 1626 aa25.05■■□□□ 1.6
PCDHB19P-201ENST00000570871 LAMC3Q9Y6N6 1575 aa25.01■■□□□ 1.6
PCDHB19P-201ENST00000570871 BIVM-ERCC5R4GMW8 1640 aa24.99■■□□□ 1.59
PCDHB19P-201ENST00000570871 KIF21AQ7Z4S6 1674 aa24.91■■□□□ 1.58
PCDHB19P-201ENST00000570871 ERICH3Q5RHP9 1530 aa24.91■■□□□ 1.58
PCDHB19P-201ENST00000570871 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
PCDHB19P-201ENST00000570871 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
PCDHB19P-201ENST00000570871 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
PCDHB19P-201ENST00000570871 PDS5BQ9NTI5 1447 aa24.83■■□□□ 1.57
PCDHB19P-201ENST00000570871 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.56
PCDHB19P-201ENST00000570871 KANK4Q5T7N3 995 aaPredicted RBP24.8■■□□□ 1.56
PCDHB19P-201ENST00000570871 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
PCDHB19P-201ENST00000570871 FGD5Q6ZNL6 1462 aa24.78■■□□□ 1.56
PCDHB19P-201ENST00000570871 TOPBP1Q92547 1522 aa24.78■■□□□ 1.56
PCDHB19P-201ENST00000570871 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
PCDHB19P-201ENST00000570871 RRBP1Q9P2E9 1410 aaKnown RBP24.7■■□□□ 1.55
PCDHB19P-201ENST00000570871 RAD54L2Q9Y4B4 1467 aa24.7■■□□□ 1.54
PCDHB19P-201ENST00000570871 POLA1P09884 1462 aaPredicted RBP24.67■■□□□ 1.54
PCDHB19P-201ENST00000570871 KIF27Q86VH2 1401 aa24.67■■□□□ 1.54
PCDHB19P-201ENST00000570871 CUX2O14529 1486 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms