RNA–Protein interactions for RNA: ENST00000568095.5

LINC01541-202, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 1 (best) BASIC

Gene LINC01541, Length 3,105 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-202ENST00000568095 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.07□□□□□ -1.28
LINC01541-202ENST00000568095 NWD1Q149M9 1564 aa7.07□□□□□ -1.28
LINC01541-202ENST00000568095 ST20-MTHFSA0A0A6YYL1 179 aa7.07□□□□□ -1.28
LINC01541-202ENST00000568095 PLEKHG1Q9ULL1 1385 aa7.07□□□□□ -1.28
LINC01541-202ENST00000568095 USP19O94966 1318 aa7.07□□□□□ -1.28
LINC01541-202ENST00000568095 AKAP12Q02952 1782 aa7.07□□□□□ -1.28
LINC01541-202ENST00000568095 YTHDC2Q9H6S0 1430 aaKnown RBP7.06□□□□□ -1.28
LINC01541-202ENST00000568095 SLC4A3P48751 1232 aa7.06□□□□□ -1.28
LINC01541-202ENST00000568095 CFAP70Q5T0N1 1121 aa7.06□□□□□ -1.28
LINC01541-202ENST00000568095 PER1O15534 1290 aaPredicted RBP7.06□□□□□ -1.28
LINC01541-202ENST00000568095 SKAP1Q86WV1 359 aa7.06□□□□□ -1.28
LINC01541-202ENST00000568095 CDCA7LQ96GN5 454 aa7.06□□□□□ -1.28
LINC01541-202ENST00000568095 NRKQ7Z2Y5 1582 aa7.06□□□□□ -1.28
LINC01541-202ENST00000568095 MON2Q7Z3U7 1717 aa7.05□□□□□ -1.28
LINC01541-202ENST00000568095 EIF3AQ14152 1382 aaKnown RBP7.05□□□□□ -1.28
LINC01541-202ENST00000568095 FSD2A1L4K1 749 aa7.05□□□□□ -1.28
LINC01541-202ENST00000568095 MLECQ14165 292 aa7.05□□□□□ -1.28
LINC01541-202ENST00000568095 L1TD1Q5T7N2 865 aaKnown RBP7.05□□□□□ -1.28
LINC01541-202ENST00000568095 ZNF521Q96K83 1311 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 VGFO15240 615 aaPredicted RBP7.04□□□□□ -1.28
LINC01541-202ENST00000568095 ZNF326Q5BKZ1 582 aaKnown RBP7.04□□□□□ -1.28
LINC01541-202ENST00000568095 ANTXR1Q9H6X2 564 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 PTPRUQ92729 1446 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 NALCNQ8IZF0 1738 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 FAM135BQ49AJ0 1406 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 PLIN1O60240 522 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 CLCN1P35523 988 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
LINC01541-202ENST00000568095 GLIPR1L2Q4G1C9 344 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 USP54Q70EL1 1684 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 STRCP1A6NGW2 1772 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 CD163L1Q9NR16 1453 aa7.04□□□□□ -1.28
LINC01541-202ENST00000568095 KIF20BQ96Q89 1820 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 PTCH1Q13635 1447 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 RRP9O43818 475 aaKnown RBP7.03□□□□□ -1.28
LINC01541-202ENST00000568095 C20orf194Q5TEA3 1177 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 STRCQ7RTU9 1775 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 ABCC11Q96J66 1382 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 METP08581 1390 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 SAMD1Q6SPF0 538 aaPredicted RBP7.03□□□□□ -1.28
LINC01541-202ENST00000568095 POGKQ9P215 609 aa7.03□□□□□ -1.28
LINC01541-202ENST00000568095 FMN2Q9NZ56 1722 aa7.02□□□□□ -1.29
LINC01541-202ENST00000568095 CEBPAP49715 358 aaPredicted RBP7.02□□□□□ -1.29
LINC01541-202ENST00000568095 TRMT2AQ8IZ69 625 aaKnown RBP7.02□□□□□ -1.29
LINC01541-202ENST00000568095 ITSN1Q15811 1721 aa7.02□□□□□ -1.29
LINC01541-202ENST00000568095 MARF1Q9Y4F3 1742 aaKnown RBP7.02□□□□□ -1.29
LINC01541-202ENST00000568095 XIRP1Q702N8 1843 aaKnown RBP7.01□□□□□ -1.29
LINC01541-202ENST00000568095 SENP3-EIF4A1A0A087X0R7 540 aa7.01□□□□□ -1.29
LINC01541-202ENST00000568095 PUS7Q96PZ0 661 aaKnown RBP7.01□□□□□ -1.29
LINC01541-202ENST00000568095 ZMYND15Q9H091 742 aa7.01□□□□□ -1.29
LINC01541-202ENST00000568095 LTKP29376 864 aa7.01□□□□□ -1.29
LINC01541-202ENST00000568095 DUSP27Q5VZP5 1158 aa7.01□□□□□ -1.29
LINC01541-202ENST00000568095 NPC1L1Q9UHC9 1359 aa7.01□□□□□ -1.29
LINC01541-202ENST00000568095 RGPD8O14715 1765 aaPredicted RBP7□□□□□ -1.29
LINC01541-202ENST00000568095 SHPRHQ149N8 1683 aa7□□□□□ -1.29
LINC01541-202ENST00000568095 ABCF1Q8NE71 845 aaKnown RBP eCLIP7□□□□□ -1.29
LINC01541-202ENST00000568095 SIRT1Q96EB6 747 aa7□□□□□ -1.29
LINC01541-202ENST00000568095 CENPJQ9HC77 1338 aaPredicted RBP7□□□□□ -1.29
LINC01541-202ENST00000568095 PLEKHH1Q9ULM0 1364 aa7□□□□□ -1.29
LINC01541-202ENST00000568095 XRCC6P12956 609 aaKnown RBP eCLIP6.99□□□□□ -1.29
LINC01541-202ENST00000568095 CDC42BPGQ6DT37 1551 aa6.99□□□□□ -1.29
LINC01541-202ENST00000568095 ATP7BP35670 1465 aa6.99□□□□□ -1.29
LINC01541-202ENST00000568095 LMTK3Q96Q04 1460 aa6.99□□□□□ -1.29
LINC01541-202ENST00000568095 TMEM132EQ6IEE7 984 aa6.99□□□□□ -1.29
LINC01541-202ENST00000568095 U3KPZ7 1027 aaPredicted RBP6.99□□□□□ -1.29
LINC01541-202ENST00000568095 PIK3R4Q99570 1358 aa6.99□□□□□ -1.29
LINC01541-202ENST00000568095 SPINK5Q9NQ38 1064 aaPredicted RBP6.98□□□□□ -1.29
LINC01541-202ENST00000568095 NUTM2DQ5VT03 806 aaPredicted RBP6.98□□□□□ -1.29
LINC01541-202ENST00000568095 ZNF219Q9P2Y4 722 aaPredicted RBP6.98□□□□□ -1.29
LINC01541-202ENST00000568095 ROBO2Q9HCK4 1378 aa6.98□□□□□ -1.29
LINC01541-202ENST00000568095 TMF1P82094 1093 aa6.98□□□□□ -1.29
LINC01541-202ENST00000568095 NINLQ9Y2I6 1382 aa6.98□□□□□ -1.29
LINC01541-202ENST00000568095 PDIA4P13667 645 aaKnown RBP6.97□□□□□ -1.29
LINC01541-202ENST00000568095 HSP90AA2PQ14568 343 aaPredicted RBP6.97□□□□□ -1.29
LINC01541-202ENST00000568095 ILDR1Q86SU0 546 aaPredicted RBP6.97□□□□□ -1.29
LINC01541-202ENST00000568095 POLR3GLQ9BT43 218 aa6.97□□□□□ -1.29
LINC01541-202ENST00000568095 CCDC9Q9Y3X0 531 aaKnown RBP6.97□□□□□ -1.29
LINC01541-202ENST00000568095 HSP90AA1P07900 732 aaKnown RBP6.96□□□□□ -1.29
LINC01541-202ENST00000568095 SLFN5Q08AF3 891 aa6.96□□□□□ -1.29
LINC01541-202ENST00000568095 BECN1Q14457 450 aa6.96□□□□□ -1.29
LINC01541-202ENST00000568095 DHX37Q8IY37 1157 aaKnown RBP6.96□□□□□ -1.29
LINC01541-202ENST00000568095 ESF1Q9H501 851 aaKnown RBP6.96□□□□□ -1.29
LINC01541-202ENST00000568095 NKTRP30414 1462 aaKnown RBP6.96□□□□□ -1.29
LINC01541-202ENST00000568095 MAPK8IP3Q9UPT6 1336 aa6.96□□□□□ -1.3
LINC01541-202ENST00000568095 CNGB1Q14028 1251 aaPredicted RBP6.96□□□□□ -1.3
LINC01541-202ENST00000568095 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.96□□□□□ -1.3
LINC01541-202ENST00000568095 PNNQ9H307 717 aaKnown RBP6.96□□□□□ -1.3
LINC01541-202ENST00000568095 ISY1Q9ULR0 285 aaKnown RBP6.96□□□□□ -1.3
LINC01541-202ENST00000568095 LRRC7Q96NW7 1537 aa6.96□□□□□ -1.3
LINC01541-202ENST00000568095 CPSF1Q10570 1443 aaKnown RBP6.96□□□□□ -1.3
LINC01541-202ENST00000568095 SEC24BO95487 1268 aa6.96□□□□□ -1.3
LINC01541-202ENST00000568095 NEUROD2Q15784 382 aa6.96□□□□□ -1.3
LINC01541-202ENST00000568095 GOLGA6L3A6NEY3 463 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 TRAK1Q9UPV9 953 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 ANKRD36BQ8N2N9 1353 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 KDM4FA0A1W2PPD8 638 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 IGHDP01880 384 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 TBC1D32Q96NH3 1257 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 ADAMTS8Q9UP79 889 aa6.95□□□□□ -1.3
LINC01541-202ENST00000568095 TBX22Q9Y458 520 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms