RNA–Protein interactions for RNA: ENST00000558709.1

SCG3-203, Transcript of secretogranin III, humanhuman

TSL 2

Gene SCG3, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-203ENST00000558709 FAM98CQ17RN3 349 aaKnown RBP12.83□□□□□ -0.36
SCG3-203ENST00000558709 TATDN2Q93075 761 aa12.83□□□□□ -0.36
SCG3-203ENST00000558709 ATP7AQ04656 1500 aa12.83□□□□□ -0.36
SCG3-203ENST00000558709 ZMYM3Q14202 1370 aa12.82□□□□□ -0.36
SCG3-203ENST00000558709 NEURL4Q96JN8 1562 aa12.82□□□□□ -0.36
SCG3-203ENST00000558709 NBPF26B4DH59 902 aa12.82□□□□□ -0.36
SCG3-203ENST00000558709 KCTD12Q96CX2 325 aaKnown RBP12.82□□□□□ -0.36
SCG3-203ENST00000558709 HIC1Q14526 733 aa12.81□□□□□ -0.36
SCG3-203ENST00000558709 PTPRKQ15262 1439 aa12.8□□□□□ -0.36
SCG3-203ENST00000558709 HSPA1LP34931 641 aa12.8□□□□□ -0.36
SCG3-203ENST00000558709 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
SCG3-203ENST00000558709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.8□□□□□ -0.36
SCG3-203ENST00000558709 ZFRQ96KR1 1074 aaKnown RBP12.8□□□□□ -0.36
SCG3-203ENST00000558709 CPS1P31327 1500 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 SMAPO00193 183 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 NUDT18Q6ZVK8 323 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 WNT2BQ93097 391 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 PNMA3Q9UL41 463 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 ALKQ9UM73 1620 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 STRCP1A6NGW2 1772 aa12.79□□□□□ -0.36
SCG3-203ENST00000558709 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
SCG3-203ENST00000558709 GPIHBP1Q8IV16 184 aa12.78□□□□□ -0.36
SCG3-203ENST00000558709 EYA1Q99502 592 aa12.78□□□□□ -0.36
SCG3-203ENST00000558709 GOLGA8CPA6NN73 597 aa12.77□□□□□ -0.37
SCG3-203ENST00000558709 PIP4K2BP78356 416 aa12.77□□□□□ -0.37
SCG3-203ENST00000558709 ADGRG1Q9Y653 693 aa12.77□□□□□ -0.37
SCG3-203ENST00000558709 A2ML1A8K2U0 1454 aa12.77□□□□□ -0.37
SCG3-203ENST00000558709 GNPATO15228 680 aa12.76□□□□□ -0.37
SCG3-203ENST00000558709 FECHP22830 423 aa12.76□□□□□ -0.37
SCG3-203ENST00000558709 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
SCG3-203ENST00000558709 A2MP01023 1474 aa12.75□□□□□ -0.37
SCG3-203ENST00000558709 VWDEQ8N2E2 1590 aa12.75□□□□□ -0.37
SCG3-203ENST00000558709 ANKK1Q8NFD2 765 aa12.75□□□□□ -0.37
SCG3-203ENST00000558709 HCSTQ9UBK5 93 aa12.75□□□□□ -0.37
SCG3-203ENST00000558709 SHANK2Q9UPX8 1470 aa12.74□□□□□ -0.37
SCG3-203ENST00000558709 SOWAHBA6NEL2 793 aa12.74□□□□□ -0.37
SCG3-203ENST00000558709 IQGAP1P46940 1657 aa12.73□□□□□ -0.37
SCG3-203ENST00000558709 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
SCG3-203ENST00000558709 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
SCG3-203ENST00000558709 RNF17Q9BXT8 1623 aaKnown RBP12.73□□□□□ -0.37
SCG3-203ENST00000558709 CASKIN1Q8WXD9 1431 aa12.72□□□□□ -0.37
SCG3-203ENST00000558709 LMOD2Q6P5Q4 547 aa12.72□□□□□ -0.37
SCG3-203ENST00000558709 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
SCG3-203ENST00000558709 DEPDC5O75140 1603 aa12.72□□□□□ -0.37
SCG3-203ENST00000558709 CFAP65Q6ZU64 1925 aaKnown RBP12.72□□□□□ -0.37
SCG3-203ENST00000558709 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
SCG3-203ENST00000558709 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
SCG3-203ENST00000558709 TOM1O60784 492 aa12.71□□□□□ -0.37
SCG3-203ENST00000558709 BCAMP50895 628 aa12.71□□□□□ -0.37
SCG3-203ENST00000558709 SYNMO15061 1565 aa12.71□□□□□ -0.37
SCG3-203ENST00000558709 FAM161AQ3B820 660 aa12.7□□□□□ -0.38
SCG3-203ENST00000558709 GGT6Q6P531 493 aa12.7□□□□□ -0.38
SCG3-203ENST00000558709 HNRNPMP52272 730 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCG3-203ENST00000558709 FYCO1Q9BQS8 1478 aa12.69□□□□□ -0.38
SCG3-203ENST00000558709 PLEKHH2Q8IVE3 1493 aa12.68□□□□□ -0.38
SCG3-203ENST00000558709 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
SCG3-203ENST00000558709 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.68□□□□□ -0.38
SCG3-203ENST00000558709 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
SCG3-203ENST00000558709 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
SCG3-203ENST00000558709 PXYLP1Q8TE99 480 aa12.67□□□□□ -0.38
SCG3-203ENST00000558709 LRCH3Q96II8 777 aa12.67□□□□□ -0.38
SCG3-203ENST00000558709 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
SCG3-203ENST00000558709 SETD1AO15047 1707 aaKnown RBP12.67□□□□□ -0.38
SCG3-203ENST00000558709 KDM5DQ9BY66 1539 aa12.67□□□□□ -0.38
SCG3-203ENST00000558709 PTPN5P54829 565 aa12.66□□□□□ -0.38
SCG3-203ENST00000558709 PZPP20742 1482 aa12.65□□□□□ -0.38
SCG3-203ENST00000558709 TIAM1Q13009 1591 aa12.65□□□□□ -0.38
SCG3-203ENST00000558709 UGGT1Q9NYU2 1555 aa12.65□□□□□ -0.38
SCG3-203ENST00000558709 TNRQ92752 1358 aa12.65□□□□□ -0.38
SCG3-203ENST00000558709 MED14O60244 1454 aa12.65□□□□□ -0.38
SCG3-203ENST00000558709 FAM135AQ9P2D6 1515 aa12.64□□□□□ -0.39
SCG3-203ENST00000558709 METTL3Q86U44 580 aaKnown RBP12.64□□□□□ -0.39
SCG3-203ENST00000558709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCG3-203ENST00000558709 NPHP4O75161 1426 aaPredicted RBP12.63□□□□□ -0.39
SCG3-203ENST00000558709 LRRC7Q96NW7 1537 aa12.63□□□□□ -0.39
SCG3-203ENST00000558709 OATP04181 439 aa12.63□□□□□ -0.39
SCG3-203ENST00000558709 DNAJB2P25686 324 aa12.63□□□□□ -0.39
SCG3-203ENST00000558709 SWT1Q5T5J6 900 aaKnown RBP12.63□□□□□ -0.39
SCG3-203ENST00000558709 TMEM134Q9H6X4 195 aa12.63□□□□□ -0.39
SCG3-203ENST00000558709 RCCD1A6NED2 376 aa12.62□□□□□ -0.39
SCG3-203ENST00000558709 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
SCG3-203ENST00000558709 WBP1LQ9NX94 342 aa12.62□□□□□ -0.39
SCG3-203ENST00000558709 TSR3Q9UJK0 312 aaKnown RBP12.62□□□□□ -0.39
SCG3-203ENST00000558709 HPS5Q9UPZ3 1129 aa12.62□□□□□ -0.39
SCG3-203ENST00000558709 UBR1Q8IWV7 1749 aa12.62□□□□□ -0.39
SCG3-203ENST00000558709 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
SCG3-203ENST00000558709 MAP2K5Q13163 448 aa12.61□□□□□ -0.39
SCG3-203ENST00000558709 CEP152O94986 1710 aa12.61□□□□□ -0.39
SCG3-203ENST00000558709 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
SCG3-203ENST00000558709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.6□□□□□ -0.39
SCG3-203ENST00000558709 CFDP1Q9UEE9 299 aaPredicted RBP12.6□□□□□ -0.39
SCG3-203ENST00000558709 MBD5Q9P267 1494 aa12.59□□□□□ -0.39
SCG3-203ENST00000558709 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
SCG3-203ENST00000558709 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
SCG3-203ENST00000558709 PHOX2BQ99453 314 aa12.59□□□□□ -0.39
SCG3-203ENST00000558709 RTEL1-TNFRSF6BF6WH68 1400 aa12.58□□□□□ -0.4
SCG3-203ENST00000558709 NYAP1Q6ZVC0 841 aa12.58□□□□□ -0.4
SCG3-203ENST00000558709 BCANQ96GW7 911 aa12.58□□□□□ -0.4
SCG3-203ENST00000558709 RGS17Q9UGC6 210 aaPredicted RBP12.58□□□□□ -0.4
SCG3-203ENST00000558709 DHX29Q7Z478 1369 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms