RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 CSPP1Q1MSJ5 1256 aa8.19□□□□□ -1.1
IDH3A-206ENST00000558535 NBPF11Q86T75 865 aa8.19□□□□□ -1.1
IDH3A-206ENST00000558535 TMEM2Q9UHN6 1383 aa8.19□□□□□ -1.1
IDH3A-206ENST00000558535 TTC36A6NLP5 189 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 UBAP1LF5GYI3 381 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 NBPF1Q3BBV0 1214 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 KIAA1211Q6ZU35 1233 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 BSDC1Q9NW68 430 aaPredicted RBP8.18□□□□□ -1.1
IDH3A-206ENST00000558535 ZHX1Q9UKY1 873 aaPredicted RBP8.18□□□□□ -1.1
IDH3A-206ENST00000558535 UNC13BO14795 1591 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 ADGRB3O60242 1522 aa8.18□□□□□ -1.1
IDH3A-206ENST00000558535 PPP1R15AO75807 674 aaPredicted RBP8.17□□□□□ -1.1
IDH3A-206ENST00000558535 MYH16Q9H6N6 1097 aa8.17□□□□□ -1.1
IDH3A-206ENST00000558535 RAI14Q9P0K7 980 aa8.17□□□□□ -1.1
IDH3A-206ENST00000558535 TET3O43151 1660 aa8.17□□□□□ -1.1
IDH3A-206ENST00000558535 IRX6P78412 446 aaPredicted RBP8.16□□□□□ -1.1
IDH3A-206ENST00000558535 FAM50AQ14320 339 aaKnown RBP8.16□□□□□ -1.1
IDH3A-206ENST00000558535 TXNDC2Q86VQ3 553 aa8.16□□□□□ -1.1
IDH3A-206ENST00000558535 STAG3Q9UJ98 1225 aa8.16□□□□□ -1.1
IDH3A-206ENST00000558535 DHX57Q6P158 1386 aaKnown RBP8.16□□□□□ -1.1
IDH3A-206ENST00000558535 CALRP27797 417 aaKnown RBP8.16□□□□□ -1.1
IDH3A-206ENST00000558535 PDE4AP27815 886 aa8.16□□□□□ -1.1
IDH3A-206ENST00000558535 PIK3C2BO00750 1634 aa8.15□□□□□ -1.1
IDH3A-206ENST00000558535 B4GALNT3Q6L9W6 998 aa8.15□□□□□ -1.1
IDH3A-206ENST00000558535 EGFL6Q8IUX8 553 aa8.15□□□□□ -1.1
IDH3A-206ENST00000558535 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.15□□□□□ -1.1
IDH3A-206ENST00000558535 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.15□□□□□ -1.17e-8■■■■□ 25
IDH3A-206ENST00000558535 NKTRP30414 1462 aaKnown RBP8.15□□□□□ -1.1
IDH3A-206ENST00000558535 GCC2Q8IWJ2 1684 aa8.15□□□□□ -1.1
IDH3A-206ENST00000558535 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.11
IDH3A-206ENST00000558535 MCM5P33992 734 aa8.15□□□□□ -1.11
IDH3A-206ENST00000558535 CASC1Q6TDU7 716 aa8.15□□□□□ -1.11
IDH3A-206ENST00000558535 PRDM10Q9NQV6 1147 aa8.15□□□□□ -1.11
IDH3A-206ENST00000558535 CCDC144AA2RUR9 1427 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 NCOA3Q9Y6Q9 1424 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 SSR1P43307 286 aaKnown RBP8.14□□□□□ -1.11
IDH3A-206ENST00000558535 NBPF9Q3BBW0 867 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 CHIC2Q9UKJ5 165 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 KIF3AQ9Y496 699 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 DISP3Q9P2K9 1392 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 TRIM52Q96A61 297 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 IQGAP3Q86VI3 1631 aa8.14□□□□□ -1.11
IDH3A-206ENST00000558535 SMG6Q86US8 1419 aaKnown RBP8.13□□□□□ -1.11
IDH3A-206ENST00000558535 PLEKHG1Q9ULL1 1385 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 RIPK4P57078 832 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 IDI1Q13907 227 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 GPATCH11Q8N954 259 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 DIP2AQ14689 1571 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 PIK3R4Q99570 1358 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 KCNA6P17658 529 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 MFAP1P55081 439 aaKnown RBP8.13□□□□□ -1.11
IDH3A-206ENST00000558535 SATB1Q01826 763 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 GABPB1Q06547 395 aaPredicted RBP8.13□□□□□ -1.11
IDH3A-206ENST00000558535 KDM2AQ9Y2K7 1162 aa8.13□□□□□ -1.11
IDH3A-206ENST00000558535 NWD1Q149M9 1564 aa8.12□□□□□ -1.11
IDH3A-206ENST00000558535 XRCC6P12956 609 aaKnown RBP eCLIP8.12□□□□□ -1.11
IDH3A-206ENST00000558535 LTKP29376 864 aa8.12□□□□□ -1.11
IDH3A-206ENST00000558535 ANAPC15P60006 121 aa8.12□□□□□ -1.11
IDH3A-206ENST00000558535 BRMS1Q9HCU9 246 aa8.12□□□□□ -1.11
IDH3A-206ENST00000558535 RRBP1Q9P2E9 1410 aaKnown RBP8.12□□□□□ -1.11
IDH3A-206ENST00000558535 ZSCAN30Q86W11 494 aa8.12□□□□□ -1.11
IDH3A-206ENST00000558535 RAD50Q92878 1312 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 ZFYVE9O95405 1425 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 KIF1CO43896 1103 aaKnown RBP8.11□□□□□ -1.11
IDH3A-206ENST00000558535 BECN1Q14457 450 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 CALCOCO1Q9P1Z2 691 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 VGLL3A8MV65 326 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 FOXD1Q16676 465 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 MNS1Q8NEH6 495 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 TIGD1Q96MW7 591 aa8.11□□□□□ -1.11
IDH3A-206ENST00000558535 FAM135BQ49AJ0 1406 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 TULP2O00295 520 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 SOX12O15370 315 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 LMOD3Q0VAK6 560 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 CCDC173Q0VFZ6 552 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 MYCBPQ99417 103 aaPredicted RBP8.1□□□□□ -1.11
IDH3A-206ENST00000558535 IBTKQ9P2D0 1353 aaPredicted RBP8.1□□□□□ -1.11
IDH3A-206ENST00000558535 ZNF500O60304 480 aaPredicted RBP8.1□□□□□ -1.11
IDH3A-206ENST00000558535 IGSF3O75054 1194 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 IRX5P78411 483 aaPredicted RBP8.1□□□□□ -1.11
IDH3A-206ENST00000558535 HNRNPUQ00839 825 aaKnown RBP eCLIP8.1□□□□□ -1.11
IDH3A-206ENST00000558535 FEZ1Q99689 392 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 TBX22Q9Y458 520 aa8.1□□□□□ -1.11
IDH3A-206ENST00000558535 RIMS2Q9UQ26 1411 aa8.09□□□□□ -1.11
IDH3A-206ENST00000558535 TMEM131LA2VDJ0 1609 aa8.09□□□□□ -1.11
IDH3A-206ENST00000558535 ZKSCAN8Q15776 578 aaPredicted RBP8.09□□□□□ -1.11
IDH3A-206ENST00000558535 MSNP26038 577 aaKnown RBP8.09□□□□□ -1.12
IDH3A-206ENST00000558535 FAM43BQ6ZT52 329 aaPredicted RBP8.09□□□□□ -1.12
IDH3A-206ENST00000558535 TERF2IPQ9NYB0 399 aa8.09□□□□□ -1.12
IDH3A-206ENST00000558535 FAM13BQ9NYF5 915 aa8.09□□□□□ -1.12
IDH3A-206ENST00000558535 NUP155O75694 1391 aa8.09□□□□□ -1.12
IDH3A-206ENST00000558535 SOCS7O14512 581 aa8.08□□□□□ -1.12
IDH3A-206ENST00000558535 FRAT2O75474 233 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-206ENST00000558535 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
IDH3A-206ENST00000558535 ALKQ9UM73 1620 aa8.08□□□□□ -1.12
IDH3A-206ENST00000558535 MYCNP04198 464 aaPredicted RBP8.08□□□□□ -1.12
IDH3A-206ENST00000558535 HSPA1LP34931 641 aa8.08□□□□□ -1.12
IDH3A-206ENST00000558535 SASS6Q6UVJ0 657 aa8.08□□□□□ -1.12
IDH3A-206ENST00000558535 CEP83Q9Y592 693 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms