RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
SRP54-213ENST00000556994 USP32Q8NFA0 1604 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
SRP54-213ENST00000556994 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 A0A1W2PP64 1363 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 ZBTB40Q9NUA8 1239 aa14.36□□□□□ -0.11
SRP54-213ENST00000556994 LMTK2Q8IWU2 1503 aa14.35□□□□□ -0.11
SRP54-213ENST00000556994 GLI2P10070 1586 aa14.35□□□□□ -0.11
SRP54-213ENST00000556994 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
SRP54-213ENST00000556994 NCBP3Q53F19 620 aaKnown RBP14.35□□□□□ -0.11
SRP54-213ENST00000556994 NSD2O96028 1365 aa14.34□□□□□ -0.11
SRP54-213ENST00000556994 RPGRIP1LQ68CZ1 1315 aa14.34□□□□□ -0.11
SRP54-213ENST00000556994 ASXL2Q76L83 1435 aa14.34□□□□□ -0.11
SRP54-213ENST00000556994 FYB1O15117 783 aa14.33□□□□□ -0.11
SRP54-213ENST00000556994 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.11
SRP54-213ENST00000556994 FBLN1P23142 703 aa14.33□□□□□ -0.11
SRP54-213ENST00000556994 ZNF692Q9BU19 519 aaPredicted RBP14.33□□□□□ -0.12
SRP54-213ENST00000556994 MINK1Q8N4C8 1332 aaPredicted RBP14.33□□□□□ -0.12
SRP54-213ENST00000556994 NUCB1Q02818 461 aa14.32□□□□□ -0.12
SRP54-213ENST00000556994 C1orf115Q9H7X2 142 aa14.32□□□□□ -0.12
SRP54-213ENST00000556994 ABCC11Q96J66 1382 aa14.31□□□□□ -0.12
SRP54-213ENST00000556994 PUS7Q96PZ0 661 aaKnown RBP14.31□□□□□ -0.12
SRP54-213ENST00000556994 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
SRP54-213ENST00000556994 ARHGEF28Q8N1W1 1705 aaKnown RBP14.31□□□□□ -0.12
SRP54-213ENST00000556994 DIAPH1O60610 1272 aaKnown RBP14.31□□□□□ -0.12
SRP54-213ENST00000556994 CHD1LQ86WJ1 897 aa14.31□□□□□ -0.12
SRP54-213ENST00000556994 IPO8O15397 1037 aaKnown RBP14.3□□□□□ -0.12
SRP54-213ENST00000556994 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
SRP54-213ENST00000556994 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
SRP54-213ENST00000556994 CAMSAP1Q5T5Y3 1602 aa14.29□□□□□ -0.12
SRP54-213ENST00000556994 COL3A1P02461 1466 aaPredicted RBP14.29□□□□□ -0.12
SRP54-213ENST00000556994 IDI1Q13907 227 aa14.29□□□□□ -0.12
SRP54-213ENST00000556994 THUMPD2Q9BTF0 503 aaKnown RBP14.29□□□□□ -0.12
SRP54-213ENST00000556994 FRMPD1Q5SYB0 1578 aa14.29□□□□□ -0.12
SRP54-213ENST00000556994 ELL2O00472 640 aaPredicted RBP14.29□□□□□ -0.12
SRP54-213ENST00000556994 RBM25P49756 843 aaKnown RBP14.29□□□□□ -0.12
SRP54-213ENST00000556994 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
SRP54-213ENST00000556994 PRAM1Q96QH2 718 aa14.29□□□□□ -0.12
SRP54-213ENST00000556994 IL16Q14005 1332 aa14.28□□□□□ -0.12
SRP54-213ENST00000556994 HSP90AB1P08238 724 aaKnown RBP14.28□□□□□ -0.12
SRP54-213ENST00000556994 CD2BP2O95400 341 aaKnown RBP14.27□□□□□ -0.12
SRP54-213ENST00000556994 DDIT3P35638 169 aa14.27□□□□□ -0.12
SRP54-213ENST00000556994 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.12
SRP54-213ENST00000556994 DDX11L8A8MPP1 907 aa14.27□□□□□ -0.13
SRP54-213ENST00000556994 RAPGEF3O95398 923 aa14.27□□□□□ -0.13
SRP54-213ENST00000556994 PRKAR2BP31323 418 aa14.27□□□□□ -0.13
SRP54-213ENST00000556994 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.13
SRP54-213ENST00000556994 GRPEL1Q9HAV7 217 aa14.27□□□□□ -0.13
SRP54-213ENST00000556994 ABCC3O15438 1527 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 HMOX1P09601 288 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 MRE11P49959 708 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■■□□□ 13.5
SRP54-213ENST00000556994 SIGLEC1Q9BZZ2 1709 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 NEXMIFQ5QGS0 1516 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 ALDH1L2Q3SY69 923 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 TSPYL6Q8N831 410 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 SNX21Q969T3 373 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 KIF2CQ99661 725 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 CABP1Q9NZU7 370 aa14.26□□□□□ -0.13
SRP54-213ENST00000556994 ZBTB7BO15156 539 aaPredicted RBP14.25□□□□□ -0.13
SRP54-213ENST00000556994 HSP90AA1P07900 732 aaKnown RBP14.25□□□□□ -0.13
SRP54-213ENST00000556994 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
SRP54-213ENST00000556994 NAP1L5Q96NT1 182 aaPredicted RBP14.25□□□□□ -0.13
SRP54-213ENST00000556994 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 NCOA3Q9Y6Q9 1424 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 BMP2KLQ5H9B9 411 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 GAS2L3Q86XJ1 694 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 HECW2Q9P2P5 1572 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 PNNQ9H307 717 aaKnown RBP14.24□□□□□ -0.13
SRP54-213ENST00000556994 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
SRP54-213ENST00000556994 POGZQ7Z3K3 1410 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 FCHSD2O94868 740 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 TBC1D9Q6ZT07 1266 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
SRP54-213ENST00000556994 CDK19Q9BWU1 502 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 VAMP4O75379 141 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 SIRT2Q8IXJ6 389 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
SRP54-213ENST00000556994 MRPL50Q8N5N7 158 aaKnown RBP14.23□□□□□ -0.13
SRP54-213ENST00000556994 NPM1P06748 294 aaKnown RBP eCLIP14.22□□□□□ -0.13
SRP54-213ENST00000556994 CLCN1P35523 988 aa14.22□□□□□ -0.13
SRP54-213ENST00000556994 UBE2Q2Q8WVN8 375 aa14.22□□□□□ -0.13
SRP54-213ENST00000556994 RAB3GAP1Q15042 981 aa14.21□□□□□ -0.13
SRP54-213ENST00000556994 POLKQ9UBT6 870 aa14.21□□□□□ -0.13
SRP54-213ENST00000556994 ATAD2Q6PL18 1390 aa14.21□□□□□ -0.13
SRP54-213ENST00000556994 PNPLA6Q8IY17 1366 aa14.21□□□□□ -0.13
SRP54-213ENST00000556994 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
SRP54-213ENST00000556994 GCC1Q96CN9 775 aa14.2□□□□□ -0.14
SRP54-213ENST00000556994 GBP4Q96PP9 640 aa14.2□□□□□ -0.14
SRP54-213ENST00000556994 ERBB4Q15303 1308 aa14.2□□□□□ -0.14
SRP54-213ENST00000556994 LRRC7Q96NW7 1537 aa14.2□□□□□ -0.14
SRP54-213ENST00000556994 PTPRMP28827 1452 aa14.2□□□□□ -0.14
SRP54-213ENST00000556994 K7ELQ4 463 aaPredicted RBP14.19□□□□□ -0.14
SRP54-213ENST00000556994 SSFA2P28290 1259 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 GAS2L2Q8NHY3 880 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 NFE2L2Q16236 605 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 MBIPQ9NS73 344 aa14.19□□□□□ -0.14
SRP54-213ENST00000556994 CIZ1Q9ULV3 898 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms