RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 KDM6BO15054 1643 aa8.55□□□□□ -1.04
CDKN3-206ENST00000541304 FRMPD1Q5SYB0 1578 aa8.55□□□□□ -1.04
CDKN3-206ENST00000541304 EIF2AK4Q9P2K8 1649 aaKnown RBP8.54□□□□□ -1.04
CDKN3-206ENST00000541304 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
CDKN3-206ENST00000541304 HNRNPMP52272 730 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDKN3-206ENST00000541304 TSR3Q9UJK0 312 aaKnown RBP8.54□□□□□ -1.04
CDKN3-206ENST00000541304 HPS5Q9UPZ3 1129 aa8.54□□□□□ -1.04
CDKN3-206ENST00000541304 ARHGEF40Q8TER5 1519 aa8.54□□□□□ -1.04
CDKN3-206ENST00000541304 FAM135AQ9P2D6 1515 aa8.54□□□□□ -1.04
CDKN3-206ENST00000541304 TSPOAP1O95153 1857 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
CDKN3-206ENST00000541304 WBP1LQ9NX94 342 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 NAIPQ13075 1403 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 PTPRKQ15262 1439 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 SETD5Q9C0A6 1442 aa8.53□□□□□ -1.04
CDKN3-206ENST00000541304 BCORL1Q5H9F3 1711 aa8.52□□□□□ -1.05
CDKN3-206ENST00000541304 A0A0G2JS52 829 aa8.52□□□□□ -1.05
CDKN3-206ENST00000541304 PNMA3Q9UL41 463 aa8.52□□□□□ -1.05
CDKN3-206ENST00000541304 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
CDKN3-206ENST00000541304 KIDINS220Q9ULH0 1771 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 AGLP35573 1532 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 SMAPO00193 183 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 PLCB2Q00722 1185 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 AFAP1Q8N556 730 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 TATDN2Q93075 761 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 PCGF6Q9BYE7 350 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 DIP2CQ9Y2E4 1556 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 A2MP01023 1474 aa8.51□□□□□ -1.05
CDKN3-206ENST00000541304 DHX29Q7Z478 1369 aaKnown RBP8.5□□□□□ -1.05
CDKN3-206ENST00000541304 ITGAEP38570 1179 aa8.5□□□□□ -1.05
CDKN3-206ENST00000541304 MLLT3P42568 568 aaPredicted RBP8.5□□□□□ -1.05
CDKN3-206ENST00000541304 PADI6Q6TGC4 694 aa8.5□□□□□ -1.05
CDKN3-206ENST00000541304 ABCA6Q8N139 1617 aa8.5□□□□□ -1.05
CDKN3-206ENST00000541304 ATP10AO60312 1499 aa8.5□□□□□ -1.05
CDKN3-206ENST00000541304 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CDKN3-206ENST00000541304 IRX2Q9BZI1 471 aaPredicted RBP8.49□□□□□ -1.05
CDKN3-206ENST00000541304 KDM5DQ9BY66 1539 aa8.49□□□□□ -1.05
CDKN3-206ENST00000541304 UNC13BO14795 1591 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 C3orf80F5H4A9 247 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 RGS20O76081 388 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 RAPGEF3O95398 923 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 NUDT18Q6ZVK8 323 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 TTC13Q8NBP0 860 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
CDKN3-206ENST00000541304 PRDM15P57071 1507 aaPredicted RBP8.48□□□□□ -1.05
CDKN3-206ENST00000541304 RAB3GAP2Q9H2M9 1393 aa8.48□□□□□ -1.05
CDKN3-206ENST00000541304 DEPDC5O75140 1603 aa8.47□□□□□ -1.05
CDKN3-206ENST00000541304 RNF17Q9BXT8 1623 aaKnown RBP8.47□□□□□ -1.05
CDKN3-206ENST00000541304 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
CDKN3-206ENST00000541304 CHIC2Q9UKJ5 165 aa8.47□□□□□ -1.05
CDKN3-206ENST00000541304 KANK1Q14678 1352 aa8.47□□□□□ -1.05
CDKN3-206ENST00000541304 PPP4CP60510 307 aa8.46□□□□□ -1.06
CDKN3-206ENST00000541304 RRP7BPQ9NSQ0 103 aa8.46□□□□□ -1.06
CDKN3-206ENST00000541304 CLSPNQ9HAW4 1339 aa8.46□□□□□ -1.06
CDKN3-206ENST00000541304 ZC3H13Q5T200 1668 aaKnown RBP8.46□□□□□ -1.06
CDKN3-206ENST00000541304 RNF40O75150 1001 aa8.45□□□□□ -1.06
CDKN3-206ENST00000541304 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
CDKN3-206ENST00000541304 KCNC4Q03721 635 aa8.45□□□□□ -1.06
CDKN3-206ENST00000541304 YEATS2Q9ULM3 1422 aa8.45□□□□□ -1.06
CDKN3-206ENST00000541304 LMTK2Q8IWU2 1503 aa8.44□□□□□ -1.06
CDKN3-206ENST00000541304 NECTIN2Q92692 538 aa8.44□□□□□ -1.06
CDKN3-206ENST00000541304 VWDEQ8N2E2 1590 aa8.44□□□□□ -1.06
CDKN3-206ENST00000541304 IQGAP3Q86VI3 1631 aa8.43□□□□□ -1.06
CDKN3-206ENST00000541304 PTGDRQ13258 359 aa8.43□□□□□ -1.06
CDKN3-206ENST00000541304 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
CDKN3-206ENST00000541304 RPRD2Q5VT52 1461 aaKnown RBP8.43□□□□□ -1.06
CDKN3-206ENST00000541304 SEMA3EO15041 775 aa8.41□□□□□ -1.06
CDKN3-206ENST00000541304 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
CDKN3-206ENST00000541304 SLF2Q8IX21 1173 aa8.41□□□□□ -1.06
CDKN3-206ENST00000541304 TET3O43151 1660 aa8.4□□□□□ -1.06
CDKN3-206ENST00000541304 MROH1Q8NDA8 1641 aa8.4□□□□□ -1.06
CDKN3-206ENST00000541304 NUP155O75694 1391 aa8.4□□□□□ -1.06
CDKN3-206ENST00000541304 NUTM2FA1L443 756 aa8.4□□□□□ -1.06
CDKN3-206ENST00000541304 KIF3BO15066 747 aa8.4□□□□□ -1.06
CDKN3-206ENST00000541304 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
CDKN3-206ENST00000541304 EFCAB6Q5THR3 1501 aa8.39□□□□□ -1.07
CDKN3-206ENST00000541304 ARHGAP31Q2M1Z3 1444 aa8.39□□□□□ -1.07
CDKN3-206ENST00000541304 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CDKN3-206ENST00000541304 EYA1Q99502 592 aa8.39□□□□□ -1.07
CDKN3-206ENST00000541304 DHX57Q6P158 1386 aaKnown RBP8.38□□□□□ -1.07
CDKN3-206ENST00000541304 MROH2AA6NES4 1674 aa8.38□□□□□ -1.07
CDKN3-206ENST00000541304 TRIM52Q96A61 297 aa8.38□□□□□ -1.07
CDKN3-206ENST00000541304 ABCC3O15438 1527 aa8.38□□□□□ -1.07
CDKN3-206ENST00000541304 PZPP20742 1482 aa8.38□□□□□ -1.07
CDKN3-206ENST00000541304 FCHSD2O94868 740 aa8.37□□□□□ -1.07
CDKN3-206ENST00000541304 DNAJB2P25686 324 aa8.37□□□□□ -1.07
CDKN3-206ENST00000541304 RBM46Q8TBY0 533 aaKnown RBP8.37□□□□□ -1.07
CDKN3-206ENST00000541304 MTRQ99707 1265 aa8.37□□□□□ -1.07
CDKN3-206ENST00000541304 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
CDKN3-206ENST00000541304 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
CDKN3-206ENST00000541304 WASHC2CQ9Y4E1 1318 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 APLP1P51693 650 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 TJAP1Q5JTD0 557 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 MPHOSPH9Q99550 1183 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 CAMSAP1Q5T5Y3 1602 aa8.36□□□□□ -1.07
CDKN3-206ENST00000541304 ARID4BQ4LE39 1312 aaPredicted RBP8.35□□□□□ -1.07
CDKN3-206ENST00000541304 TESPA1A2RU30 521 aaPredicted RBP8.35□□□□□ -1.07
CDKN3-206ENST00000541304 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms