RNA–Protein interactions for RNA: ENST00000532925.5

ATPAF1-210, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-210ENST00000532925 NEURL4Q96JN8 1562 aa8□□□□□ -1.13
ATPAF1-210ENST00000532925 ANP32CO43423 234 aa7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 KDM5CP41229 1560 aa7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 PDIA6Q15084 440 aa7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 EFCAB2Q5VUJ9 269 aa7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 CFAP74Q9C0B2 1584 aa7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 INO80Q9ULG1 1556 aaPredicted RBP7.99□□□□□ -1.13
ATPAF1-210ENST00000532925 ZFYVE16Q7Z3T8 1539 aa7.98□□□□□ -1.13
ATPAF1-210ENST00000532925 HSPA5P11021 654 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-210ENST00000532925 DDX10Q13206 875 aaKnown RBP7.98□□□□□ -1.13
ATPAF1-210ENST00000532925 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
ATPAF1-210ENST00000532925 SMAPO00193 183 aa7.97□□□□□ -1.13
ATPAF1-210ENST00000532925 HNRNPMP52272 730 aaKnown RBP eCLIP7.97□□□□□ -1.13
ATPAF1-210ENST00000532925 PACS2Q86VP3 889 aa7.97□□□□□ -1.13
ATPAF1-210ENST00000532925 BBXQ8WY36 941 aaPredicted RBP7.97□□□□□ -1.13
ATPAF1-210ENST00000532925 CCDC7Q96M83 1385 aa7.97□□□□□ -1.13
ATPAF1-210ENST00000532925 PRIM1P49642 420 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-210ENST00000532925 Q6ZNB5 142 aa7.96□□□□□ -1.14
ATPAF1-210ENST00000532925 FAM198AQ9UFP1 575 aa7.96□□□□□ -1.14
ATPAF1-210ENST00000532925 VWDEQ8N2E2 1590 aa7.96□□□□□ -1.14
ATPAF1-210ENST00000532925 ROCK2O75116 1388 aaKnown RBP7.96□□□□□ -1.14
ATPAF1-210ENST00000532925 TET3O43151 1660 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 CCDC144AA2RUR9 1427 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 NBPF8Q3BBV2 869 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 CDCA7LQ96GN5 454 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 YTHDC1Q96MU7 727 aaKnown RBP7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 WASHC2AQ641Q2 1341 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 TRPM1Q7Z4N2 1603 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 GPRASP1Q5JY77 1395 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 BCORL1Q5H9F3 1711 aa7.95□□□□□ -1.14
ATPAF1-210ENST00000532925 PRDM15P57071 1507 aaPredicted RBP7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 ATP7AQ04656 1500 aa7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 C3orf80F5H4A9 247 aa7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 PPP4CP60510 307 aa7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 SAMD7Q7Z3H4 446 aa7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 FANCAO15360 1455 aa7.94□□□□□ -1.14
ATPAF1-210ENST00000532925 TRPM2O94759 1503 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 RNF17Q9BXT8 1623 aaKnown RBP7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 SPHKAPQ2M3C7 1700 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 GRXCR2A6NFK2 248 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 SPDYE16A6NNV3 312 aaPredicted RBP7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 PRSS12P56730 875 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 USP47Q96K76 1375 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 PRAG1Q86YV5 1406 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 TRAPPC8Q9Y2L5 1435 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 PLA2R1Q13018 1463 aa7.93□□□□□ -1.14
ATPAF1-210ENST00000532925 CEP152O94986 1710 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 CDHR5Q9HBB8 845 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 PTPRTO14522 1441 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 ASXL2Q76L83 1435 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 ZNF518AQ6AHZ1 1483 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 LMTK2Q8IWU2 1503 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 E9PCH4 1651 aa7.92□□□□□ -1.14
ATPAF1-210ENST00000532925 E2F4Q16254 413 aa7.91□□□□□ -1.14
ATPAF1-210ENST00000532925 PNMA3Q9UL41 463 aa7.91□□□□□ -1.14
ATPAF1-210ENST00000532925 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
ATPAF1-210ENST00000532925 ADGRL1O94910 1474 aa7.91□□□□□ -1.14
ATPAF1-210ENST00000532925 KIAA1210Q9ULL0 1709 aa7.91□□□□□ -1.14
ATPAF1-210ENST00000532925 A2MP01023 1474 aa7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 SPAG9O60271 1321 aaKnown RBP7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 KIF7Q2M1P5 1343 aa7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 SPRYD3Q8NCJ5 442 aa7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 TATDN2Q93075 761 aa7.9□□□□□ -1.14
ATPAF1-210ENST00000532925 KIDINS220Q9ULH0 1771 aa7.89□□□□□ -1.15
ATPAF1-210ENST00000532925 MROH1Q8NDA8 1641 aa7.89□□□□□ -1.15
ATPAF1-210ENST00000532925 NEO1Q92859 1461 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 MLH3Q9UHC1 1453 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 KANK1Q14678 1352 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 DHX29Q7Z478 1369 aaKnown RBP7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 NBPF26B4DH59 902 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 CERKQ8TCT0 537 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 MTRQ99707 1265 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 HIRIP3Q9BW71 556 aaPredicted RBP7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 HECW2Q9P2P5 1572 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 EFCAB6Q5THR3 1501 aa7.88□□□□□ -1.15
ATPAF1-210ENST00000532925 RNF40O75150 1001 aa7.87□□□□□ -1.15
ATPAF1-210ENST00000532925 NUDT18Q6ZVK8 323 aa7.87□□□□□ -1.15
ATPAF1-210ENST00000532925 PRKRIP1Q9H875 184 aaPredicted RBP7.87□□□□□ -1.15
ATPAF1-210ENST00000532925 MADDQ8WXG6 1647 aa7.87□□□□□ -1.15
ATPAF1-210ENST00000532925 POGZQ7Z3K3 1410 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 SCAPERQ9BY12 1400 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 GLI2P10070 1586 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 LCE2BO14633 110 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 OSBPP22059 807 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 MYOM2P54296 1465 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 COL17A1Q9UMD9 1497 aaPredicted RBP7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 IQGAP1P46940 1657 aa7.86□□□□□ -1.15
ATPAF1-210ENST00000532925 ZMYM4Q5VZL5 1548 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 GFRA3O60609 400 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 ZNF516Q92618 1163 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 CARD11Q9BXL7 1154 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 PRKD2Q9BZL6 878 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 IL21Q9HBE4 155 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 WDR70Q9NW82 654 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 IFT172Q9UG01 1749 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 CLTCL1P53675 1640 aa7.85□□□□□ -1.15
ATPAF1-210ENST00000532925 KIF1BO60333 1816 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms