RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 CEP162Q5TB80 1403 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 FAM135AQ9P2D6 1515 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 DNMT1P26358 1616 aaKnown RBP13.14□□□□□ -0.31
CDC27-208ENST00000532575 FCHSD2O94868 740 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 TSPY4P0CV99 314 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 TSPY10P0CW01 314 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 KRTAP3-3Q9BYR6 98 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 KRTAP3-2Q9BYR7 98 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 SHANK2Q9UPX8 1470 aa13.14□□□□□ -0.31
CDC27-208ENST00000532575 PZPP20742 1482 aa13.13□□□□□ -0.31
CDC27-208ENST00000532575 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
CDC27-208ENST00000532575 MIA2Q96PC5 1412 aa13.13□□□□□ -0.31
CDC27-208ENST00000532575 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
CDC27-208ENST00000532575 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
CDC27-208ENST00000532575 NLRP1Q9C000 1473 aa13.11□□□□□ -0.31
CDC27-208ENST00000532575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC27-208ENST00000532575 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
CDC27-208ENST00000532575 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
CDC27-208ENST00000532575 ZBED2Q9BTP6 218 aa13.11□□□□□ -0.31
CDC27-208ENST00000532575 KDM5DQ9BY66 1539 aa13.11□□□□□ -0.31
CDC27-208ENST00000532575 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
CDC27-208ENST00000532575 PROX2Q3B8N5 592 aa13.09□□□□□ -0.31
CDC27-208ENST00000532575 PRSS12P56730 875 aa13.08□□□□□ -0.32
CDC27-208ENST00000532575 HIC1Q14526 733 aa13.08□□□□□ -0.32
CDC27-208ENST00000532575 CDCA7LQ96GN5 454 aa13.08□□□□□ -0.32
CDC27-208ENST00000532575 MED14O60244 1454 aa13.08□□□□□ -0.32
CDC27-208ENST00000532575 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
CDC27-208ENST00000532575 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
CDC27-208ENST00000532575 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
CDC27-208ENST00000532575 CAMSAP2Q08AD1 1489 aa13.06□□□□□ -0.32
CDC27-208ENST00000532575 NCOA2Q15596 1464 aa13.06□□□□□ -0.32
CDC27-208ENST00000532575 GNPATO15228 680 aa13.06□□□□□ -0.32
CDC27-208ENST00000532575 PADI6Q6TGC4 694 aa13.06□□□□□ -0.32
CDC27-208ENST00000532575 RBM27Q9P2N5 1060 aaKnown RBP13.06□□□□□ -0.32
CDC27-208ENST00000532575 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
CDC27-208ENST00000532575 POLR1AO95602 1720 aaPredicted RBP13.05□□□□□ -0.32
CDC27-208ENST00000532575 TRIM6-TRIM34B2RNG4 842 aa13.05□□□□□ -0.32
CDC27-208ENST00000532575 ANKRD13DQ6ZTN6 518 aa13.05□□□□□ -0.32
CDC27-208ENST00000532575 TSKSQ9UJT2 592 aa13.05□□□□□ -0.32
CDC27-208ENST00000532575 VPS9D1Q9Y2B5 631 aa13.05□□□□□ -0.32
CDC27-208ENST00000532575 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
CDC27-208ENST00000532575 DEPDC5O75140 1603 aa13.04□□□□□ -0.32
CDC27-208ENST00000532575 FECHP22830 423 aa13.04□□□□□ -0.32
CDC27-208ENST00000532575 TTC13Q8NBP0 860 aa13.04□□□□□ -0.32
CDC27-208ENST00000532575 FAM198AQ9UFP1 575 aa13.04□□□□□ -0.32
CDC27-208ENST00000532575 TK2O00142 265 aa13.03□□□□□ -0.32
CDC27-208ENST00000532575 ZMYND10O75800 440 aa13.03□□□□□ -0.32
CDC27-208ENST00000532575 ARHGEF5Q12774 1597 aa13.03□□□□□ -0.32
CDC27-208ENST00000532575 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
CDC27-208ENST00000532575 PCDH10Q9P2E7 1040 aa13.02□□□□□ -0.33
CDC27-208ENST00000532575 ONECUT3O60422 494 aaPredicted RBP13.01□□□□□ -0.33
CDC27-208ENST00000532575 TPRNQ4KMQ1 711 aa13□□□□□ -0.33
CDC27-208ENST00000532575 BARGINQ6ZT62 677 aa13□□□□□ -0.33
CDC27-208ENST00000532575 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
CDC27-208ENST00000532575 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
CDC27-208ENST00000532575 KIAA1468Q9P260 1216 aa12.99□□□□□ -0.33
CDC27-208ENST00000532575 EID1Q9Y6B2 187 aa12.99□□□□□ -0.33
CDC27-208ENST00000532575 IQGAP1P46940 1657 aa12.99□□□□□ -0.33
CDC27-208ENST00000532575 ABCC3O15438 1527 aa12.98□□□□□ -0.33
CDC27-208ENST00000532575 ERVK-7P63135 1459 aa12.98□□□□□ -0.33
CDC27-208ENST00000532575 RABGEF1Q9UJ41 708 aa12.98□□□□□ -0.33
CDC27-208ENST00000532575 C3orf80F5H4A9 247 aa12.97□□□□□ -0.33
CDC27-208ENST00000532575 HRO43593 1189 aa12.97□□□□□ -0.33
CDC27-208ENST00000532575 PACS2Q86VP3 889 aa12.97□□□□□ -0.33
CDC27-208ENST00000532575 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
CDC27-208ENST00000532575 ZC3H13Q5T200 1668 aaKnown RBP12.96□□□□□ -0.33
CDC27-208ENST00000532575 RNF17Q9BXT8 1623 aaKnown RBP12.96□□□□□ -0.33
CDC27-208ENST00000532575 MAP2K5Q13163 448 aa12.96□□□□□ -0.33
CDC27-208ENST00000532575 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
CDC27-208ENST00000532575 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
CDC27-208ENST00000532575 BHMG1C9JSJ3 638 aaPredicted RBP12.95□□□□□ -0.34
CDC27-208ENST00000532575 LTKP29376 864 aa12.95□□□□□ -0.34
CDC27-208ENST00000532575 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
CDC27-208ENST00000532575 LRRC9Q6ZRR7 1453 aa12.95□□□□□ -0.34
CDC27-208ENST00000532575 SYNMO15061 1565 aa12.94□□□□□ -0.34
CDC27-208ENST00000532575 ADGRG1Q9Y653 693 aa12.94□□□□□ -0.34
CDC27-208ENST00000532575 EIF2AK4Q9P2K8 1649 aaKnown RBP12.94□□□□□ -0.34
CDC27-208ENST00000532575 MYOM3Q5VTT5 1437 aa12.94□□□□□ -0.34
CDC27-208ENST00000532575 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 TATDN2Q93075 761 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 PNMA3Q9UL41 463 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 ARHGAP31Q2M1Z3 1444 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 DUOX2Q9NRD8 1548 aa12.93□□□□□ -0.34
CDC27-208ENST00000532575 MINK1Q8N4C8 1332 aaPredicted RBP12.92□□□□□ -0.34
CDC27-208ENST00000532575 SMAPO00193 183 aa12.92□□□□□ -0.34
CDC27-208ENST00000532575 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
CDC27-208ENST00000532575 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 VPS8Q8N3P4 1428 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 IRF6O14896 467 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
CDC27-208ENST00000532575 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 SEPT9Q9UHD8 586 aaPredicted RBP12.91□□□□□ -0.34
CDC27-208ENST00000532575 SLIT1O75093 1534 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 KANK1Q14678 1352 aa12.91□□□□□ -0.34
CDC27-208ENST00000532575 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.34
CDC27-208ENST00000532575 RRP7BPQ9NSQ0 103 aa12.9□□□□□ -0.34
CDC27-208ENST00000532575 KIF15Q9NS87 1388 aa12.9□□□□□ -0.34
CDC27-208ENST00000532575 TMEM2Q9UHN6 1383 aa12.9□□□□□ -0.34
CDC27-208ENST00000532575 STRCP1A6NGW2 1772 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms