RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 RIMS2Q9UQ26 1411 aa24.51■■□□□ 1.51
LTBP3-217ENST00000530785 ZMYND15Q9H091 742 aa24.51■■□□□ 1.51
LTBP3-217ENST00000530785 ANKRD26Q9UPS8 1709 aa24.49■■□□□ 1.51
LTBP3-217ENST00000530785 TCP11L2Q8N4U5 519 aa24.49■■□□□ 1.51
LTBP3-217ENST00000530785 RRP7AQ9Y3A4 280 aaKnown RBP24.49■■□□□ 1.51
LTBP3-217ENST00000530785 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
LTBP3-217ENST00000530785 USP19O94966 1318 aa24.48■■□□□ 1.51
LTBP3-217ENST00000530785 VSIG10Q8N0Z9 540 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 TERF2IPQ9NYB0 399 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 BCAR3O75815 825 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 CEBPAP49715 358 aaPredicted RBP24.47■■□□□ 1.51
LTBP3-217ENST00000530785 NLRP1Q9C000 1473 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 DLC1Q96QB1 1528 aa24.47■■□□□ 1.51
LTBP3-217ENST00000530785 RRP9O43818 475 aaKnown RBP24.46■■□□□ 1.51
LTBP3-217ENST00000530785 PLPPR3Q6T4P5 718 aa24.46■■□□□ 1.51
LTBP3-217ENST00000530785 CDK19Q9BWU1 502 aa24.46■■□□□ 1.51
LTBP3-217ENST00000530785 PHF23Q9BUL5 403 aaPredicted RBP24.45■■□□□ 1.51
LTBP3-217ENST00000530785 CLCN1P35523 988 aa24.45■■□□□ 1.5
LTBP3-217ENST00000530785 MED14O60244 1454 aa24.44■■□□□ 1.5
LTBP3-217ENST00000530785 NRXN3Q9Y4C0 1643 aa24.44■■□□□ 1.5
LTBP3-217ENST00000530785 RGS3P49796 1198 aa24.43■■□□□ 1.5
LTBP3-217ENST00000530785 FYB1O15117 783 aa24.43■■□□□ 1.5
LTBP3-217ENST00000530785 ADGRB2O60241 1585 aa24.43■■□□□ 1.5
LTBP3-217ENST00000530785 U2AF1L5P0DN76 240 aaPredicted RBP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 U2AF1Q01081 240 aaKnown RBP eCLIP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 HSP90AA2PQ14568 343 aaPredicted RBP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 PNNQ9H307 717 aaKnown RBP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 COL3A1P02461 1466 aaPredicted RBP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 NAP1L5Q96NT1 182 aaPredicted RBP24.42■■□□□ 1.5
LTBP3-217ENST00000530785 WAPLQ7Z5K2 1190 aa24.41■■□□□ 1.5
LTBP3-217ENST00000530785 KIF20BQ96Q89 1820 aa24.4■■□□□ 1.5
LTBP3-217ENST00000530785 HDGFL2Q7Z4V5 671 aaPredicted RBP24.4■■□□□ 1.5
LTBP3-217ENST00000530785 BECN1Q14457 450 aa24.4■■□□□ 1.5
LTBP3-217ENST00000530785 CABP1Q9NZU7 370 aa24.4■■□□□ 1.5
LTBP3-217ENST00000530785 FER1L4A9Z1Z3 1794 aa24.4■■□□□ 1.5
LTBP3-217ENST00000530785 FSD2A1L4K1 749 aa24.39■■□□□ 1.5
LTBP3-217ENST00000530785 HSP90AA1P07900 732 aaKnown RBP24.39■■□□□ 1.5
LTBP3-217ENST00000530785 ANTXR1Q9H6X2 564 aa24.39■■□□□ 1.5
LTBP3-217ENST00000530785 XRCC6P12956 609 aaKnown RBP eCLIP24.39■■□□□ 1.49
LTBP3-217ENST00000530785 CCDC27Q2M243 656 aa24.39■■□□□ 1.49
LTBP3-217ENST00000530785 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
LTBP3-217ENST00000530785 METP08581 1390 aa24.35■■□□□ 1.49
LTBP3-217ENST00000530785 ATP7BP35670 1465 aa24.34■■□□□ 1.49
LTBP3-217ENST00000530785 GOLGA6L3A6NEY3 463 aa24.34■■□□□ 1.49
LTBP3-217ENST00000530785 U2SURPO15042 1029 aaKnown RBP24.34■■□□□ 1.49
LTBP3-217ENST00000530785 NCBP3Q53F19 620 aaKnown RBP24.34■■□□□ 1.49
LTBP3-217ENST00000530785 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.34■■□□□ 1.49
LTBP3-217ENST00000530785 C3P01024 1663 aa24.33■■□□□ 1.49
LTBP3-217ENST00000530785 SLKQ9H2G2 1235 aaPredicted RBP24.32■■□□□ 1.48
LTBP3-217ENST00000530785 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
LTBP3-217ENST00000530785 PDE3AQ14432 1141 aa24.31■■□□□ 1.48
LTBP3-217ENST00000530785 RARSP54136 660 aaKnown RBP24.3■■□□□ 1.48
LTBP3-217ENST00000530785 TNRQ92752 1358 aa24.3■■□□□ 1.48
LTBP3-217ENST00000530785 CANXP27824 592 aaKnown RBP24.3■■□□□ 1.48
LTBP3-217ENST00000530785 KNDC1Q76NI1 1749 aa24.3■■□□□ 1.48
LTBP3-217ENST00000530785 SEC24BO95487 1268 aa24.29■■□□□ 1.48
LTBP3-217ENST00000530785 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.29■■□□□ 1.48
LTBP3-217ENST00000530785 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
LTBP3-217ENST00000530785 UBR1Q8IWV7 1749 aa24.28■■□□□ 1.48
LTBP3-217ENST00000530785 RIMS1Q86UR5 1692 aaKnown RBP24.28■■□□□ 1.48
LTBP3-217ENST00000530785 PANK1Q8TE04 598 aa24.27■■□□□ 1.48
LTBP3-217ENST00000530785 MYH16Q9H6N6 1097 aa24.27■■□□□ 1.48
LTBP3-217ENST00000530785 TXNDC2Q86VQ3 553 aa24.27■■□□□ 1.48
LTBP3-217ENST00000530785 PANK2Q9BZ23 570 aa24.27■■□□□ 1.48
LTBP3-217ENST00000530785 ADAMTSL3P82987 1691 aa24.27■■□□□ 1.47
LTBP3-217ENST00000530785 WASLO00401 505 aaPredicted RBP24.26■■□□□ 1.47
LTBP3-217ENST00000530785 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
LTBP3-217ENST00000530785 MAPK8IP3Q9UPT6 1336 aa24.26■■□□□ 1.47
LTBP3-217ENST00000530785 TECPR2O15040 1411 aa24.25■■□□□ 1.47
LTBP3-217ENST00000530785 DIAPH1O60610 1272 aaKnown RBP24.25■■□□□ 1.47
LTBP3-217ENST00000530785 CPS1P31327 1500 aa24.25■■□□□ 1.47
LTBP3-217ENST00000530785 TMPOP42166 694 aaKnown RBP24.25■■□□□ 1.47
LTBP3-217ENST00000530785 COG6Q9Y2V7 657 aa24.25■■□□□ 1.47
LTBP3-217ENST00000530785 CPSF1Q10570 1443 aaKnown RBP24.24■■□□□ 1.47
LTBP3-217ENST00000530785 FAM135BQ49AJ0 1406 aa24.24■■□□□ 1.47
LTBP3-217ENST00000530785 CDC42BPGQ6DT37 1551 aa24.23■■□□□ 1.47
LTBP3-217ENST00000530785 TMEM2Q9UHN6 1383 aa24.23■■□□□ 1.47
LTBP3-217ENST00000530785 BCL2L13Q9BXK5 485 aa24.23■■□□□ 1.47
LTBP3-217ENST00000530785 IGHDP01880 384 aa24.23■■□□□ 1.47
LTBP3-217ENST00000530785 HDGFP51858 240 aaKnown RBP24.22■■□□□ 1.47
LTBP3-217ENST00000530785 TRIM35Q9UPQ4 493 aa24.22■■□□□ 1.47
LTBP3-217ENST00000530785 EDC4Q6P2E9 1401 aaKnown RBP24.22■■□□□ 1.47
LTBP3-217ENST00000530785 FBLN1P23142 703 aa24.22■■□□□ 1.47
LTBP3-217ENST00000530785 MCM4P33991 863 aa24.21■■□□□ 1.47
LTBP3-217ENST00000530785 CLUAP1Q96AJ1 413 aa24.21■■□□□ 1.47
LTBP3-217ENST00000530785 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
LTBP3-217ENST00000530785 TSR2Q969E8 191 aaKnown RBP24.2■■□□□ 1.46
LTBP3-217ENST00000530785 POLKQ9UBT6 870 aa24.2■■□□□ 1.46
LTBP3-217ENST00000530785 MRE11P49959 708 aa24.2■■□□□ 1.46
LTBP3-217ENST00000530785 MAP2P11137 1827 aaKnown RBP24.2■■□□□ 1.46
LTBP3-217ENST00000530785 TNNQ9UQP3 1299 aa24.19■■□□□ 1.46
LTBP3-217ENST00000530785 ARXQ96QS3 562 aa24.19■■□□□ 1.46
LTBP3-217ENST00000530785 TBC1D2Q9BYX2 928 aa24.19■■□□□ 1.46
LTBP3-217ENST00000530785 MON2Q7Z3U7 1717 aa24.18■■□□□ 1.46
LTBP3-217ENST00000530785 RLBP1P12271 317 aa24.18■■□□□ 1.46
LTBP3-217ENST00000530785 NUDT16Q96DE0 195 aaKnown RBP24.18■■□□□ 1.46
LTBP3-217ENST00000530785 SIRT1Q96EB6 747 aa24.18■■□□□ 1.46
LTBP3-217ENST00000530785 NCKAP5LQ9HCH0 1330 aa24.18■■□□□ 1.46
LTBP3-217ENST00000530785 TBC1D32Q96NH3 1257 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms