RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	CNNM1	Q9NRU3	951 aa		12.48	□□□□□ -0.41
TCF7-223	ENST00000522653	PAF1	Q8N7H5	531 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	MPHOSPH8	Q99549	860 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	TMOD3	Q9NYL9	352 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	FGD6	Q6ZV73	1430 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	CCDC7	Q96M83	1385 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	DES	P17661	470 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	AAMP	Q13685	434 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	CCDC158	Q5M9N0	1113 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	ATF7IP	Q6VMQ6	1270 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	TOP2B	Q02880	1626 aa		12.47	□□□□□ -0.41
TCF7-223	ENST00000522653	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.46	□□□□□ -0.41
TCF7-223	ENST00000522653	MYO1B	O43795	1136 aa		12.46	□□□□□ -0.41
TCF7-223	ENST00000522653	ZKSCAN2	Q63HK3	967 aa		12.46	□□□□□ -0.41
TCF7-223	ENST00000522653	AFAP1	Q8N556	730 aa		12.46	□□□□□ -0.41
TCF7-223	ENST00000522653	MRE11	P49959	708 aa		12.46	□□□□□ -0.42
TCF7-223	ENST00000522653	HECW1	Q76N89	1606 aa		12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	TRO	Q12816	1431 aa	Predicted RBP	12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	PHF14	O94880	888 aa		12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	RPGR	Q92834	1020 aa	Known RBP	12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	12.45	□□□□□ -0.42	1e-7	■■■■■ 98.4
TCF7-223	ENST00000522653	ST5	P78524	1137 aa		12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	AMOT	Q4VCS5	1084 aa		12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	GNAI3	P08754	354 aa		12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.45	□□□□□ -0.42
TCF7-223	ENST00000522653	ODF2	Q5BJF6	829 aa		12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	TNIP1	Q15025	636 aa		12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	NINL	Q9Y2I6	1382 aa		12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	WASHC4	Q2M389	1173 aa		12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	ZNF771	Q7L3S4	317 aa	Predicted RBP	12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	STK32B	Q9NY57	414 aa		12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	POLA1	P09884	1462 aa	Predicted RBP	12.44	□□□□□ -0.42
TCF7-223	ENST00000522653	LMTK3	Q96Q04	1460 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	ST20-MTHFS	A0A0A6YYL1	179 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	ADAMTS2	O95450	1211 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	MTHFS	P49914	203 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	PPP4R3B	Q5MIZ7	849 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	EHMT1	Q9H9B1	1298 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	HDAC9	Q9UKV0	1011 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	SPDYE4	A6NLX3	237 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	FANCA	O15360	1455 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	IPO7	O95373	1038 aa	Known RBP	12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	CHMP5	Q9NZZ3	219 aa		12.43	□□□□□ -0.42
TCF7-223	ENST00000522653	LMOD1	P29536	600 aa	Predicted RBP	12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	NPHP3	Q7Z494	1330 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	CCDC70	Q6NSX1	233 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	CDK19	Q9BWU1	502 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	PANK3	Q9H999	370 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	RRP7A	Q9Y3A4	280 aa	Known RBP	12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	BAG6	P46379	1132 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	MAP3K9	P80192	1104 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	RUNDC1	Q96C34	613 aa		12.42	□□□□□ -0.42
TCF7-223	ENST00000522653	DDX49	Q9Y6V7	483 aa	Known RBP	12.42	□□□□□ -0.42
TCF7-223	ENST00000522653		B4DLN1	442 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	REC8	O95072	547 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	MRPL12	P52815	198 aa	Known RBP	12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	RIPK4	P57078	832 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	ARHGEF6	Q15052	776 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	NEUROD6	Q96NK8	337 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	DDX19B	Q9UMR2	479 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	CNTLN	Q9NXG0	1405 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	RAPGEF3	O95398	923 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	UBTFL1	P0CB47	393 aa	Predicted RBP	12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	PPP4R3A	Q6IN85	833 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	NUTM2G	Q5VZR2	741 aa		12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	LRRC59	Q96AG4	307 aa	Known RBP	12.41	□□□□□ -0.42
TCF7-223	ENST00000522653	ADGRL1	O94910	1474 aa		12.4	□□□□□ -0.42
TCF7-223	ENST00000522653	TRAF1	Q13077	416 aa		12.4	□□□□□ -0.42
TCF7-223	ENST00000522653	TTC39A	Q5SRH9	613 aa		12.4	□□□□□ -0.42
TCF7-223	ENST00000522653	PHF8	Q9UPP1	1060 aa		12.4	□□□□□ -0.42
TCF7-223	ENST00000522653	PRAM1	Q96QH2	718 aa		12.4	□□□□□ -0.42
TCF7-223	ENST00000522653	TNR	Q92752	1358 aa		12.4	□□□□□ -0.43
TCF7-223	ENST00000522653	EHBP1L1	Q8N3D4	1523 aa		12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	CT47A1	Q5JQC4	288 aa	Predicted RBP	12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	CRBN	Q96SW2	442 aa		12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	CLEC11A	Q9Y240	323 aa		12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	CCDC57	Q2TAC2	916 aa		12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	DNAJC2	Q99543	621 aa	Known RBP	12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	AIMP1	Q12904	312 aa	Known RBP	12.39	□□□□□ -0.43
TCF7-223	ENST00000522653	SLC26A8	Q96RN1	970 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	CABP2	Q9NPB3	220 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	PRX	Q9BXM0	1461 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	SOGA3	Q5TF21	947 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	USP47	Q96K76	1375 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	CAVIN4	Q5BKX8	364 aa		12.38	□□□□□ -0.43
TCF7-223	ENST00000522653	RILPL2	Q969X0	211 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	DNAJC5B	Q9UF47	199 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	TXLNA	P40222	546 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	CDK5RAP3	Q96JB5	506 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	BCL2L13	Q9BXK5	485 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	ARAP1	Q96P48	1450 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	C9orf84	Q5VXU9	1444 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	PSMA5	P28066	241 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	FYB1	O15117	783 aa		12.37	□□□□□ -0.43
TCF7-223	ENST00000522653	RFC4	P35249	363 aa		12.36	□□□□□ -0.43
TCF7-223	ENST00000522653	PES1	O00541	588 aa	Known RBP	12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms