RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 HS1BP3Q53T59 392 aa6.31□□□□□ -1.4
APC-208ENST00000508624 GAS2L2Q8NHY3 880 aa6.31□□□□□ -1.4
APC-208ENST00000508624 SNAPC4Q5SXM2 1469 aa6.31□□□□□ -1.4
APC-208ENST00000508624 ZSCAN31Q96LW9 406 aaPredicted RBP6.31□□□□□ -1.4
APC-208ENST00000508624 UHRF1BP1Q6BDS2 1440 aa6.31□□□□□ -1.4
APC-208ENST00000508624 IPO7O95373 1038 aaKnown RBP6.31□□□□□ -1.4
APC-208ENST00000508624 FCHSD2O94868 740 aa6.31□□□□□ -1.4
APC-208ENST00000508624 NGDNQ8NEJ9 315 aaKnown RBP6.31□□□□□ -1.4
APC-208ENST00000508624 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
APC-208ENST00000508624 CLCN1P35523 988 aa6.31□□□□□ -1.4
APC-208ENST00000508624 IFT57Q9NWB7 429 aa6.31□□□□□ -1.4
APC-208ENST00000508624 TRIM29Q14134 588 aa6.3□□□□□ -1.4
APC-208ENST00000508624 CCDC30Q5VVM6 783 aa6.3□□□□□ -1.4
APC-208ENST00000508624 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.3□□□□□ -1.43e-9■■■□□ 16.9
APC-208ENST00000508624 SLC52A1Q9NWF4 448 aa6.3□□□□□ -1.4
APC-208ENST00000508624 PIK3C2GO75747 1445 aa6.3□□□□□ -1.4
APC-208ENST00000508624 SYNE3Q6ZMZ3 975 aa6.3□□□□□ -1.4
APC-208ENST00000508624 MNS1Q8NEH6 495 aa6.3□□□□□ -1.4
APC-208ENST00000508624 CCDC47Q96A33 483 aaKnown RBP6.3□□□□□ -1.4
APC-208ENST00000508624 TEX14Q8IWB6 1497 aa6.3□□□□□ -1.4
APC-208ENST00000508624 GNAI2P04899 355 aa6.3□□□□□ -1.4
APC-208ENST00000508624 EXOSC9Q06265 439 aaKnown RBP6.3□□□□□ -1.4
APC-208ENST00000508624 NCBP3Q53F19 620 aaKnown RBP6.3□□□□□ -1.4
APC-208ENST00000508624 DUSP27Q5VZP5 1158 aa6.3□□□□□ -1.4
APC-208ENST00000508624 TBC1D32Q96NH3 1257 aa6.3□□□□□ -1.4
APC-208ENST00000508624 UBE2Q2Q8WVN8 375 aa6.3□□□□□ -1.4
APC-208ENST00000508624 ZNF396Q96N95 335 aaPredicted RBP6.3□□□□□ -1.4
APC-208ENST00000508624 CAVIN2O95810 425 aa6.3□□□□□ -1.4
APC-208ENST00000508624 TEFQ10587 303 aa6.3□□□□□ -1.4
APC-208ENST00000508624 G3BP1Q13283 466 aaKnown RBP eCLIP6.3□□□□□ -1.4
APC-208ENST00000508624 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
APC-208ENST00000508624 ZMYM4Q5VZL5 1548 aa6.3□□□□□ -1.4
APC-208ENST00000508624 BCAR3O75815 825 aa6.3□□□□□ -1.4
APC-208ENST00000508624 UVSSAQ2YD98 709 aa6.3□□□□□ -1.4
APC-208ENST00000508624 NOL8Q76FK4 1167 aaKnown RBP6.3□□□□□ -1.4
APC-208ENST00000508624 TSPYL1Q9H0U9 437 aa6.3□□□□□ -1.4
APC-208ENST00000508624 NPC1L1Q9UHC9 1359 aa6.29□□□□□ -1.4
APC-208ENST00000508624 NBPF1Q3BBV0 1214 aa6.29□□□□□ -1.4
APC-208ENST00000508624 TAF7LQ5H9L4 462 aa6.29□□□□□ -1.4
APC-208ENST00000508624 C1orf141Q5JVX7 400 aa6.29□□□□□ -1.4
APC-208ENST00000508624 HOMER1Q86YM7 354 aa6.29□□□□□ -1.4
APC-208ENST00000508624 UBTFL1P0CB47 393 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 TPD52L1Q16890 204 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 ZNF692Q9BU19 519 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 NEK4P51957 841 aa6.29□□□□□ -1.4
APC-208ENST00000508624 RARSP54136 660 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 CCDC27Q2M243 656 aa6.29□□□□□ -1.4
APC-208ENST00000508624 TWISTNBQ3B726 338 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 HSP90B2PQ58FF3 399 aa6.29□□□□□ -1.4
APC-208ENST00000508624 BMP2KLQ5H9B9 411 aa6.29□□□□□ -1.4
APC-208ENST00000508624 CLASRPQ8N2M8 674 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 SNX21Q969T3 373 aa6.29□□□□□ -1.4
APC-208ENST00000508624 PUS7Q96PZ0 661 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 NOB1Q9ULX3 412 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 PRPF40AO75400 957 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 CDR1P51861 262 aa6.29□□□□□ -1.4
APC-208ENST00000508624 KRT85P78386 507 aa6.29□□□□□ -1.4
APC-208ENST00000508624 FKBP5Q13451 457 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 DUOX2Q9NRD8 1548 aa6.29□□□□□ -1.4
APC-208ENST00000508624 DYNC1I1O14576 645 aa6.29□□□□□ -1.4
APC-208ENST00000508624 DHX16O60231 1041 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 HDAC1Q13547 482 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 NOC3LQ8WTT2 800 aaKnown RBP6.29□□□□□ -1.4
APC-208ENST00000508624 ANO8Q9HCE9 1232 aaPredicted RBP6.29□□□□□ -1.4
APC-208ENST00000508624 VPS37CA5D8V6 355 aaPredicted RBP6.28□□□□□ -1.4
APC-208ENST00000508624 KINO60870 393 aaKnown RBP6.28□□□□□ -1.4
APC-208ENST00000508624 PIP4K2AP48426 406 aaPredicted RBP6.28□□□□□ -1.4
APC-208ENST00000508624 AKAP17AQ02040 695 aaKnown RBP6.28□□□□□ -1.4
APC-208ENST00000508624 TSPYL4Q9UJ04 414 aa6.28□□□□□ -1.4
APC-208ENST00000508624 NSD3Q9BZ95 1437 aa6.28□□□□□ -1.4
APC-208ENST00000508624 FOXD4L5Q5VV16 416 aaPredicted RBP6.28□□□□□ -1.4
APC-208ENST00000508624 FOXD4L4Q8WXT5 416 aaPredicted RBP6.28□□□□□ -1.4
APC-208ENST00000508624 AK7Q96M32 723 aa6.28□□□□□ -1.4
APC-208ENST00000508624 NEMFO60524 1076 aa6.28□□□□□ -1.4
APC-208ENST00000508624 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
APC-208ENST00000508624 PRIMPOLQ96LW4 560 aa6.28□□□□□ -1.4
APC-208ENST00000508624 MINK1Q8N4C8 1332 aaPredicted RBP6.28□□□□□ -1.4
APC-208ENST00000508624 GRIN2AQ12879 1464 aa6.28□□□□□ -1.4
APC-208ENST00000508624 UQCRHLA0A096LP55 91 aa6.28□□□□□ -1.4
APC-208ENST00000508624 UQCRHP07919 91 aa6.28□□□□□ -1.4
APC-208ENST00000508624 TRDNQ13061 729 aa6.28□□□□□ -1.4
APC-208ENST00000508624 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
APC-208ENST00000508624 CPLX1O14810 134 aa6.28□□□□□ -1.4
APC-208ENST00000508624 KLHL40Q2TBA0 621 aa6.28□□□□□ -1.4
APC-208ENST00000508624 SAFBQ15424 915 aaKnown RBP eCLIP6.28□□□□□ -1.4
APC-208ENST00000508624 KRT32Q14532 448 aa6.27□□□□□ -1.4
APC-208ENST00000508624 TRIM5Q9C035 493 aa6.27□□□□□ -1.4
APC-208ENST00000508624 TBC1D2Q9BYX2 928 aa6.27□□□□□ -1.41
APC-208ENST00000508624 LRRCC1Q9C099 1032 aa6.27□□□□□ -1.41
APC-208ENST00000508624 CCDC112Q8NEF3 446 aa6.27□□□□□ -1.41
APC-208ENST00000508624 ARID3AQ99856 593 aa6.27□□□□□ -1.41
APC-208ENST00000508624 CFAP45Q9UL16 551 aa6.27□□□□□ -1.41
APC-208ENST00000508624 PPP6R1Q9UPN7 881 aa6.27□□□□□ -1.41
APC-208ENST00000508624 ADGRL2O95490 1459 aa6.27□□□□□ -1.41
APC-208ENST00000508624 GPATCH8Q9UKJ3 1502 aaKnown RBP6.27□□□□□ -1.41
APC-208ENST00000508624 CFAP70Q5T0N1 1121 aa6.27□□□□□ -1.41
APC-208ENST00000508624 LMOD2Q6P5Q4 547 aa6.27□□□□□ -1.41
APC-208ENST00000508624 ZNF592Q92610 1267 aa6.27□□□□□ -1.41
APC-208ENST00000508624 PRAG1Q86YV5 1406 aa6.27□□□□□ -1.41
APC-208ENST00000508624 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms