RNA–Protein interactions for RNA: ENST00000508624.5

APC-208, Transcript of APC, WNT signaling pathway regulator, humanhuman

TSL 1 (best)

Gene APC, Length 7,406 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APC-208ENST00000508624 NISCHQ9Y2I1 1504 aa9.14□□□□□ -0.95
APC-208ENST00000508624 DCAF8L2P0C7V8 631 aa8.48□□□□□ -1.05
APC-208ENST00000508624 SUPT5HO00267 1087 aaKnown RBP8.42□□□□□ -1.06
APC-208ENST00000508624 PELP1Q8IZL8 1130 aaKnown RBP8.34□□□□□ -1.07
APC-208ENST00000508624 ZEB1P37275 1124 aaPredicted RBP8.3□□□□□ -1.08
APC-208ENST00000508624 MYT1Q01538 1121 aa8.27□□□□□ -1.09
APC-208ENST00000508624 SHROOM4Q9ULL8 1493 aa8.26□□□□□ -1.09
APC-208ENST00000508624 CENPBP07199 599 aaPredicted RBP8.12□□□□□ -1.11
APC-208ENST00000508624 PCGF6Q9BYE7 350 aa8.1□□□□□ -1.11
APC-208ENST00000508624 APLP2Q06481 763 aa8.04□□□□□ -1.12
APC-208ENST00000508624 HRCP23327 699 aa8.03□□□□□ -1.12
APC-208ENST00000508624 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
APC-208ENST00000508624 TRIM41Q8WV44 630 aa7.95□□□□□ -1.14
APC-208ENST00000508624 CCER1Q8TC90 406 aaPredicted RBP7.93□□□□□ -1.14
APC-208ENST00000508624 CHIC1Q5VXU3 224 aa7.85□□□□□ -1.15
APC-208ENST00000508624 FAM9AQ8IZU1 332 aaPredicted RBP7.83□□□□□ -1.16
APC-208ENST00000508624 ERICH6Q7L0X2 663 aa7.79□□□□□ -1.16
APC-208ENST00000508624 NEFLP07196 543 aa7.79□□□□□ -1.16
APC-208ENST00000508624 EHMT2Q96KQ7 1210 aa7.78□□□□□ -1.16
APC-208ENST00000508624 DCAF1Q9Y4B6 1507 aa7.73□□□□□ -1.17
APC-208ENST00000508624 UBTFP17480 764 aaKnown RBP7.73□□□□□ -1.17
APC-208ENST00000508624 CCDC180Q9P1Z9 1646 aa7.73□□□□□ -1.17
APC-208ENST00000508624 CLSPNQ9HAW4 1339 aa7.66□□□□□ -1.18
APC-208ENST00000508624 ZCCHC6Q5VYS8 1495 aaKnown RBP7.66□□□□□ -1.18
APC-208ENST00000508624 DIEXFQ68CQ4 756 aaKnown RBP7.62□□□□□ -1.19
APC-208ENST00000508624 LOC105371045A0A1W2PR82 267 aa7.62□□□□□ -1.19
APC-208ENST00000508624 TTBK1Q5TCY1 1321 aaPredicted RBP7.61□□□□□ -1.19
APC-208ENST00000508624 YTHDC1Q96MU7 727 aaKnown RBP7.59□□□□□ -1.19
APC-208ENST00000508624 PPARGC1BQ86YN6 1023 aaKnown RBP7.56□□□□□ -1.2
APC-208ENST00000508624 ACIN1Q9UKV3 1341 aaKnown RBP7.52□□□□□ -1.21
APC-208ENST00000508624 ZNF316A6NFI3 1004 aaPredicted RBP7.51□□□□□ -1.21
APC-208ENST00000508624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.48□□□□□ -1.21
APC-208ENST00000508624 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
APC-208ENST00000508624 RANGAP1P46060 587 aaPredicted RBP7.46□□□□□ -1.21
APC-208ENST00000508624 ATP1B4Q9UN42 357 aaPredicted RBP7.46□□□□□ -1.22
APC-208ENST00000508624 HNRNPUL2Q1KMD3 747 aaKnown RBP7.46□□□□□ -1.22
APC-208ENST00000508624 DAXXQ9UER7 740 aaPredicted RBP7.44□□□□□ -1.22
APC-208ENST00000508624 MYT1LQ9UL68 1186 aa7.44□□□□□ -1.22
APC-208ENST00000508624 EEA1Q15075 1411 aa7.42□□□□□ -1.22
APC-208ENST00000508624 RTL5Q5HYW3 569 aaPredicted RBP7.42□□□□□ -1.22
APC-208ENST00000508624 ANP32CO43423 234 aa7.38□□□□□ -1.23
APC-208ENST00000508624 CSRNP3Q8WYN3 585 aa7.38□□□□□ -1.23
APC-208ENST00000508624 CDK11AQ9UQ88 783 aaPredicted RBP7.37□□□□□ -1.23
APC-208ENST00000508624 SCRIBQ14160 1630 aa7.35□□□□□ -1.23
APC-208ENST00000508624 ITGAEP38570 1179 aa7.33□□□□□ -1.24
APC-208ENST00000508624 MYO15BQ96JP2 1530 aa7.32□□□□□ -1.24
APC-208ENST00000508624 RB1CC1Q8TDY2 1594 aa7.32□□□□□ -1.24
APC-208ENST00000508624 NACADO15069 1562 aa7.3□□□□□ -1.24
APC-208ENST00000508624 ABCC9O60706 1549 aa7.29□□□□□ -1.24
APC-208ENST00000508624 FAM50AQ14320 339 aaKnown RBP7.28□□□□□ -1.24
APC-208ENST00000508624 GOLGA3Q08378 1498 aa7.27□□□□□ -1.24
APC-208ENST00000508624 SCAF1Q9H7N4 1312 aaKnown RBP7.27□□□□□ -1.25
APC-208ENST00000508624 RSF1Q96T23 1441 aaPredicted RBP7.26□□□□□ -1.25
APC-208ENST00000508624 NEUROD1Q13562 356 aa7.25□□□□□ -1.25
APC-208ENST00000508624 ANP32AP39687 249 aaKnown RBP7.25□□□□□ -1.25
APC-208ENST00000508624 TNIKQ9UKE5 1360 aa7.24□□□□□ -1.25
APC-208ENST00000508624 CEP162Q5TB80 1403 aa7.22□□□□□ -1.25
APC-208ENST00000508624 CLIP1P30622 1438 aa7.22□□□□□ -1.25
APC-208ENST00000508624 CEP164Q9UPV0 1460 aa7.22□□□□□ -1.25
APC-208ENST00000508624 TONSLQ96HA7 1378 aa7.21□□□□□ -1.25
APC-208ENST00000508624 BAZ1AQ9NRL2 1556 aaPredicted RBP7.21□□□□□ -1.26
APC-208ENST00000508624 POLR3GLQ9BT43 218 aa7.2□□□□□ -1.26
APC-208ENST00000508624 TRIM52Q96A61 297 aa7.2□□□□□ -1.26
APC-208ENST00000508624 BCANQ96GW7 911 aa7.17□□□□□ -1.26
APC-208ENST00000508624 FKBP8Q14318 412 aa7.17□□□□□ -1.26
APC-208ENST00000508624 TIMELESSQ9UNS1 1208 aa7.15□□□□□ -1.26
APC-208ENST00000508624 WRNQ14191 1432 aaPredicted RBP eCLIP7.14□□□□□ -1.27
APC-208ENST00000508624 MIER1Q8N108 512 aa7.13□□□□□ -1.27
APC-208ENST00000508624 ANP32EQ9BTT0 268 aa7.12□□□□□ -1.27
APC-208ENST00000508624 HNRNPUQ00839 825 aaKnown RBP eCLIP7.11□□□□□ -1.27
APC-208ENST00000508624 ERICH6BQ5W0A0 696 aa7.1□□□□□ -1.27
APC-208ENST00000508624 GLIPR1L2Q4G1C9 344 aa7.1□□□□□ -1.27
APC-208ENST00000508624 PABPN1Q86U42 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
APC-208ENST00000508624 DDX10Q13206 875 aaKnown RBP7.09□□□□□ -1.27
APC-208ENST00000508624 KIF27Q86VH2 1401 aa7.09□□□□□ -1.27
APC-208ENST00000508624 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.08□□□□□ -1.28
APC-208ENST00000508624 ZBTB47Q9UFB7 747 aaPredicted RBP7.08□□□□□ -1.28
APC-208ENST00000508624 FHAD1B1AJZ9 1412 aa7.07□□□□□ -1.28
APC-208ENST00000508624 VPS8Q8N3P4 1428 aa7.07□□□□□ -1.28
APC-208ENST00000508624 DDRGK1Q96HY6 314 aa7.07□□□□□ -1.28
APC-208ENST00000508624 UPF2Q9HAU5 1272 aaKnown RBP7.07□□□□□ -1.28
APC-208ENST00000508624 CCER2I3L3R5 266 aa7.07□□□□□ -1.28
APC-208ENST00000508624 CCDC136Q96JN2 1154 aa7.06□□□□□ -1.28
APC-208ENST00000508624 EIF4G2P78344 907 aaKnown RBP eCLIP7.06□□□□□ -1.28
APC-208ENST00000508624 MTUS2Q5JR59 1369 aa7.06□□□□□ -1.28
APC-208ENST00000508624 BAZ1BQ9UIG0 1483 aaKnown RBP7.05□□□□□ -1.28
APC-208ENST00000508624 ANP32BQ92688 251 aaKnown RBP7.05□□□□□ -1.28
APC-208ENST00000508624 TOP2AP11388 1531 aaKnown RBP7.04□□□□□ -1.28
APC-208ENST00000508624 CANXP27824 592 aaKnown RBP7.04□□□□□ -1.28
APC-208ENST00000508624 CCNB3Q8WWL7 1395 aa7.03□□□□□ -1.28
APC-208ENST00000508624 NEFMP07197 916 aa7.03□□□□□ -1.28
APC-208ENST00000508624 TMC1Q8TDI8 760 aa7.02□□□□□ -1.29
APC-208ENST00000508624 EIF5BO60841 1220 aaKnown RBP7.02□□□□□ -1.29
APC-208ENST00000508624 MRS2Q9HD23 443 aa7.02□□□□□ -1.29
APC-208ENST00000508624 PPP4R2Q9NY27 417 aa7.02□□□□□ -1.29
APC-208ENST00000508624 PPM1GO15355 546 aaPredicted RBP7.02□□□□□ -1.29
APC-208ENST00000508624 SUPT16HQ9Y5B9 1047 aaKnown RBP7.01□□□□□ -1.29
APC-208ENST00000508624 CNGB1Q14028 1251 aaPredicted RBP7.01□□□□□ -1.29
APC-208ENST00000508624 ZNF326Q5BKZ1 582 aaKnown RBP7.01□□□□□ -1.29
APC-208ENST00000508624 SMARCA2P51531 1590 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms