RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 PPP4R3BQ5MIZ7 849 aa8.77□□□□□ -1.01
UBE3C-208ENST00000497368 TET3O43151 1660 aa8.77□□□□□ -1.01
UBE3C-208ENST00000497368 E9PCH4 1651 aa8.76□□□□□ -1.01
UBE3C-208ENST00000497368 FOSBP53539 338 aa8.76□□□□□ -1.01
UBE3C-208ENST00000497368 ADGRB3O60242 1522 aa8.75□□□□□ -1.01
UBE3C-208ENST00000497368 CPS1P31327 1500 aa8.75□□□□□ -1.01
UBE3C-208ENST00000497368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.75□□□□□ -1.01
UBE3C-208ENST00000497368 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
UBE3C-208ENST00000497368 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
UBE3C-208ENST00000497368 IQGAP3Q86VI3 1631 aa8.75□□□□□ -1.01
UBE3C-208ENST00000497368 NPHP4O75161 1426 aaPredicted RBP8.74□□□□□ -1.01
UBE3C-208ENST00000497368 NOS1P29475 1434 aa8.74□□□□□ -1.01
UBE3C-208ENST00000497368 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
UBE3C-208ENST00000497368 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 PBX2P40425 430 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 PSEN2P49810 448 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 PDIA6Q15084 440 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 SPNS2Q8IVW8 549 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 LRRC7Q96NW7 1537 aa8.73□□□□□ -1.01
UBE3C-208ENST00000497368 TMEM131LA2VDJ0 1609 aa8.72□□□□□ -1.01
UBE3C-208ENST00000497368 SCAF11Q99590 1463 aaKnown RBP8.72□□□□□ -1.01
UBE3C-208ENST00000497368 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
UBE3C-208ENST00000497368 ANKRD13DQ6ZTN6 518 aa8.72□□□□□ -1.01
UBE3C-208ENST00000497368 KCNK17Q96T54 332 aa8.72□□□□□ -1.01
UBE3C-208ENST00000497368 PCDHGA10Q9Y5H3 936 aa8.72□□□□□ -1.01
UBE3C-208ENST00000497368 WASHC2CQ9Y4E1 1318 aa8.72□□□□□ -1.01
UBE3C-208ENST00000497368 ARHGAP33O14559 1287 aa8.71□□□□□ -1.02
UBE3C-208ENST00000497368 DDX12PQ92771 950 aa8.71□□□□□ -1.02
UBE3C-208ENST00000497368 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
UBE3C-208ENST00000497368 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
UBE3C-208ENST00000497368 MED1Q15648 1581 aaPredicted RBP8.7□□□□□ -1.02
UBE3C-208ENST00000497368 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
UBE3C-208ENST00000497368 TSPY4P0CV99 314 aa8.7□□□□□ -1.02
UBE3C-208ENST00000497368 TSPY10P0CW01 314 aa8.7□□□□□ -1.02
UBE3C-208ENST00000497368 DMRTA1Q5VZB9 504 aa8.7□□□□□ -1.02
UBE3C-208ENST00000497368 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
UBE3C-208ENST00000497368 KDM2AQ9Y2K7 1162 aa8.7□□□□□ -1.02
UBE3C-208ENST00000497368 NRXN3Q9Y4C0 1643 aa8.69□□□□□ -1.02
UBE3C-208ENST00000497368 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
UBE3C-208ENST00000497368 ZFYVE9O95405 1425 aa8.69□□□□□ -1.02
UBE3C-208ENST00000497368 SPHKAPQ2M3C7 1700 aa8.68□□□□□ -1.02
UBE3C-208ENST00000497368 CHD2O14647 1828 aaKnown RBP8.68□□□□□ -1.02
UBE3C-208ENST00000497368 PHF14O94880 888 aa8.68□□□□□ -1.02
UBE3C-208ENST00000497368 PTGER2P43116 358 aa8.68□□□□□ -1.02
UBE3C-208ENST00000497368 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
UBE3C-208ENST00000497368 LTKP29376 864 aa8.67□□□□□ -1.02
UBE3C-208ENST00000497368 RPRD2Q5VT52 1461 aaKnown RBP8.67□□□□□ -1.02
UBE3C-208ENST00000497368 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
UBE3C-208ENST00000497368 ILDR2Q71H61 639 aa8.67□□□□□ -1.02
UBE3C-208ENST00000497368 ARHGEF1Q92888 912 aaKnown RBP8.67□□□□□ -1.02
UBE3C-208ENST00000497368 ANKRD30AQ9BXX3 1397 aa8.67□□□□□ -1.02
UBE3C-208ENST00000497368 ANKRD50Q9ULJ7 1429 aa8.67□□□□□ -1.02
UBE3C-208ENST00000497368 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
UBE3C-208ENST00000497368 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
UBE3C-208ENST00000497368 RBM33Q96EV2 1170 aaKnown RBP8.66□□□□□ -1.02
UBE3C-208ENST00000497368 CHIC2Q9UKJ5 165 aa8.66□□□□□ -1.02
UBE3C-208ENST00000497368 TMEM2Q9UHN6 1383 aa8.65□□□□□ -1.02
UBE3C-208ENST00000497368 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
UBE3C-208ENST00000497368 PTPREP23469 700 aa8.65□□□□□ -1.02
UBE3C-208ENST00000497368 NBR1Q14596 966 aa8.65□□□□□ -1.02
UBE3C-208ENST00000497368 EPAS1Q99814 870 aa8.65□□□□□ -1.02
UBE3C-208ENST00000497368 CLTCL1P53675 1640 aa8.65□□□□□ -1.03
UBE3C-208ENST00000497368 ROCK1Q13464 1354 aa8.64□□□□□ -1.03
UBE3C-208ENST00000497368 XRN1Q8IZH2 1706 aaKnown RBP8.64□□□□□ -1.03
UBE3C-208ENST00000497368 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
UBE3C-208ENST00000497368 ROBO1Q9Y6N7 1651 aa8.63□□□□□ -1.03
UBE3C-208ENST00000497368 ADGRD1Q6QNK2 874 aa8.63□□□□□ -1.03
UBE3C-208ENST00000497368 THEMISQ8N1K5 641 aaPredicted RBP8.63□□□□□ -1.03
UBE3C-208ENST00000497368 RRBP1Q9P2E9 1410 aaKnown RBP8.63□□□□□ -1.03
UBE3C-208ENST00000497368 UBAP1LF5GYI3 381 aa8.62□□□□□ -1.03
UBE3C-208ENST00000497368 PRIM1P49642 420 aaKnown RBP8.62□□□□□ -1.03
UBE3C-208ENST00000497368 ANKLE2Q86XL3 938 aa8.62□□□□□ -1.03
UBE3C-208ENST00000497368 VSIG10Q8N0Z9 540 aa8.62□□□□□ -1.03
UBE3C-208ENST00000497368 NKTRP30414 1462 aaKnown RBP8.62□□□□□ -1.03
UBE3C-208ENST00000497368 DISP3Q9P2K9 1392 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 DIP2AQ14689 1571 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 COL9A1P20849 921 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
UBE3C-208ENST00000497368 EN1Q05925 392 aaPredicted RBP8.61□□□□□ -1.03
UBE3C-208ENST00000497368 IDI1Q13907 227 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 ADAMTS13Q76LX8 1427 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 KANK1Q14678 1352 aa8.61□□□□□ -1.03
UBE3C-208ENST00000497368 TRPM2O94759 1503 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 NEXMIFQ5QGS0 1516 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 TK2O00142 265 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 HSPA1LP34931 641 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 COL16A1Q07092 1604 aaPredicted RBP8.6□□□□□ -1.03
UBE3C-208ENST00000497368 SETBP1Q9Y6X0 1596 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
UBE3C-208ENST00000497368 PPP1R3GB7ZBB8 358 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 MAP3K7O43318 606 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 OSBPP22059 807 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 TSR1Q2NL82 804 aaKnown RBP8.59□□□□□ -1.03
UBE3C-208ENST00000497368 ZBED2Q9BTP6 218 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 VPS9D1Q9Y2B5 631 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 RIMS2Q9UQ26 1411 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 NALCNQ8IZF0 1738 aa8.59□□□□□ -1.03
UBE3C-208ENST00000497368 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.59□□□□□ -1.03
UBE3C-208ENST00000497368 NAIPQ13075 1403 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms