RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 C8orf37Q96NL8 207 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 TESK2Q96S53 571 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 ADAMTS8Q9UP79 889 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 LMTK2Q8IWU2 1503 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 PPRC1Q5VV67 1664 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 BRD4O60885 1362 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 MS4A1P11836 297 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 GAS2L2Q8NHY3 880 aa12.14□□□□□ -0.47
GAPVD1-219ENST00000495955 SPG7Q9UQ90 795 aa12.13□□□□□ -0.47
GAPVD1-219ENST00000495955 ANKRD36BQ8N2N9 1353 aa12.13□□□□□ -0.47
GAPVD1-219ENST00000495955 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
GAPVD1-219ENST00000495955 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
GAPVD1-219ENST00000495955 ADGRB3O60242 1522 aa12.13□□□□□ -0.47
GAPVD1-219ENST00000495955 MYOM2P54296 1465 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 SIRT1Q96EB6 747 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 E9PCH4 1651 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 PIK3C2GO75747 1445 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 EIF2S2P20042 333 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 RICTORQ6R327 1708 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 FBLN1P23142 703 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 ZNF530Q6P9A1 599 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
GAPVD1-219ENST00000495955 NGEFQ8N5V2 710 aa12.11□□□□□ -0.47
GAPVD1-219ENST00000495955 SF3B2Q13435 895 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-219ENST00000495955 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
GAPVD1-219ENST00000495955 ROBO2Q9HCK4 1378 aa12.11□□□□□ -0.47
GAPVD1-219ENST00000495955 PUS7Q96PZ0 661 aaKnown RBP12.11□□□□□ -0.47
GAPVD1-219ENST00000495955 FYB1O15117 783 aa12.1□□□□□ -0.47
GAPVD1-219ENST00000495955 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
GAPVD1-219ENST00000495955 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-219ENST00000495955 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
GAPVD1-219ENST00000495955 ZC3H13Q5T200 1668 aaKnown RBP12.1□□□□□ -0.47
GAPVD1-219ENST00000495955 OS9Q13438 667 aaPredicted RBP12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 NSD2O96028 1365 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 A0A1W2PP64 1363 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 SLC4A10Q6U841 1118 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 FER1L4A9Z1Z3 1794 aa12.09□□□□□ -0.47
GAPVD1-219ENST00000495955 PIK3R4Q99570 1358 aa12.08□□□□□ -0.47
GAPVD1-219ENST00000495955 ANKRD24Q8TF21 1146 aa12.08□□□□□ -0.47
GAPVD1-219ENST00000495955 CABP4P57796 275 aa12.08□□□□□ -0.48
GAPVD1-219ENST00000495955 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
GAPVD1-219ENST00000495955 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
GAPVD1-219ENST00000495955 E9PSI1 815 aa12.08□□□□□ -0.48
GAPVD1-219ENST00000495955 KIF13AQ9H1H9 1805 aa12.07□□□□□ -0.48
GAPVD1-219ENST00000495955 GTF2E1P29083 439 aaPredicted RBP12.07□□□□□ -0.48
GAPVD1-219ENST00000495955 GNAI1P63096 354 aa12.07□□□□□ -0.48
GAPVD1-219ENST00000495955 GCP02774 474 aa12.07□□□□□ -0.48
GAPVD1-219ENST00000495955 ITPRIPQ8IWB1 547 aa12.06□□□□□ -0.48
GAPVD1-219ENST00000495955 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
GAPVD1-219ENST00000495955 ZFYVE9O95405 1425 aa12.05□□□□□ -0.48
GAPVD1-219ENST00000495955 FCHSD2O94868 740 aa12.05□□□□□ -0.48
GAPVD1-219ENST00000495955 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
GAPVD1-219ENST00000495955 HSP90AB1P08238 724 aaKnown RBP12.05□□□□□ -0.48
GAPVD1-219ENST00000495955 PIK3C2BO00750 1634 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 EXOC5O00471 708 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 HSP90AB2PQ58FF8 381 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 CARD14Q9BXL6 1004 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 CEP170BQ9Y4F5 1589 aaPredicted RBP12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 CLUAP1Q96AJ1 413 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 CHMP3Q9Y3E7 222 aa12.04□□□□□ -0.48
GAPVD1-219ENST00000495955 SYNMO15061 1565 aa12.03□□□□□ -0.48
GAPVD1-219ENST00000495955 BTG4Q9NY30 223 aa12.03□□□□□ -0.48
GAPVD1-219ENST00000495955 PLEKHG3A1L390 1219 aa12.03□□□□□ -0.48
GAPVD1-219ENST00000495955 PREX1Q8TCU6 1659 aa12.03□□□□□ -0.48
GAPVD1-219ENST00000495955 ALKQ9UM73 1620 aa12.03□□□□□ -0.48
GAPVD1-219ENST00000495955 ARHGEF10O15013 1369 aa12.02□□□□□ -0.48
GAPVD1-219ENST00000495955 ASXL1Q8IXJ9 1541 aa12.02□□□□□ -0.49
GAPVD1-219ENST00000495955 TMX4Q9H1E5 349 aaPredicted RBP12.02□□□□□ -0.49
GAPVD1-219ENST00000495955 FAM135BQ49AJ0 1406 aa12.02□□□□□ -0.49
GAPVD1-219ENST00000495955 GNAT3A8MTJ3 354 aa12.01□□□□□ -0.49
GAPVD1-219ENST00000495955 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
GAPVD1-219ENST00000495955 AMER1Q5JTC6 1135 aaPredicted RBP12.01□□□□□ -0.49
GAPVD1-219ENST00000495955 AMOTQ4VCS5 1084 aa12.01□□□□□ -0.49
GAPVD1-219ENST00000495955 EDC4Q6P2E9 1401 aaKnown RBP12.01□□□□□ -0.49
GAPVD1-219ENST00000495955 ZBED9Q6R2W3 1325 aa12□□□□□ -0.49
GAPVD1-219ENST00000495955 PNISRQ8TF01 805 aaKnown RBP12□□□□□ -0.49
GAPVD1-219ENST00000495955 AIMP1Q12904 312 aaKnown RBP12□□□□□ -0.49
GAPVD1-219ENST00000495955 CERKQ8TCT0 537 aa12□□□□□ -0.49
GAPVD1-219ENST00000495955 TAF7LQ5H9L4 462 aa12□□□□□ -0.49
GAPVD1-219ENST00000495955 BTBD11A6QL63 1104 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 TMOD3Q9NYL9 352 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 SPATA31D1Q6ZQQ2 1576 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 NFE2L2Q16236 605 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 POLKQ9UBT6 870 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 NEXNQ0ZGT2 675 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 MPRIPQ6WCQ1 1025 aa11.99□□□□□ -0.49
GAPVD1-219ENST00000495955 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 APBB1O00213 710 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 DDX58O95786 925 aaKnown RBP11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 MCM10Q7L590 875 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 FLT4P35916 1363 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 BRINP3Q76B58 766 aa11.98□□□□□ -0.49
GAPVD1-219ENST00000495955 HOXC9P31274 260 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms