RNA–Protein interactions for RNA: ENST00000455157.6

SSUH2-208, Transcript of ssu-2 homolog (C. elegans), human

TSL 2

Gene SSUH2, Length 3,219 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSUH2-208	ENST00000455157	MADD	Q8WXG6	1647 aa		14.09	□□□□□ -0.15
SSUH2-208	ENST00000455157	UGGT1	Q9NYU2	1555 aa		14.09	□□□□□ -0.15
SSUH2-208	ENST00000455157	PPP4R3B	Q5MIZ7	849 aa		14.08	□□□□□ -0.16
SSUH2-208	ENST00000455157	CLASP1	Q7Z460	1538 aa		14.08	□□□□□ -0.16
SSUH2-208	ENST00000455157	TNPO1	Q92973	898 aa	Known RBP	14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	TMEM51	Q9NW97	253 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	NLRP1	Q9C000	1473 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	KIF16B	Q96L93	1317 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	DIAPH1	O60610	1272 aa	Known RBP	14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	CHD1L	Q86WJ1	897 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	STAG3	Q9UJ98	1225 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	HMOX1	P09601	288 aa		14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	ZSCAN20	P17040	1043 aa	Predicted RBP	14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	DDX49	Q9Y6V7	483 aa	Known RBP	14.07	□□□□□ -0.16
SSUH2-208	ENST00000455157	CCDC27	Q2M243	656 aa		14.06	□□□□□ -0.16
SSUH2-208	ENST00000455157	PTPRT	O14522	1441 aa		14.06	□□□□□ -0.16
SSUH2-208	ENST00000455157	THUMPD2	Q9BTF0	503 aa	Known RBP	14.06	□□□□□ -0.16
SSUH2-208	ENST00000455157	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	ZSCAN30	Q86W11	494 aa		14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	FBLN1	P23142	703 aa		14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	HDAC1	Q13547	482 aa	Predicted RBP	14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	TERF2IP	Q9NYB0	399 aa		14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	RBM42	Q9BTD8	480 aa	Known RBP	14.05	□□□□□ -0.16
SSUH2-208	ENST00000455157	PLXNC1	O60486	1568 aa		14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	NPM1	P06748	294 aa	Known RBP eCLIP	14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	CT47B1	P0C2W7	299 aa	Predicted RBP	14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	ARID3A	Q99856	593 aa		14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	C14orf93	Q9H972	538 aa	Known RBP	14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	TRPM2	O94759	1503 aa		14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	CLTCL1	P53675	1640 aa		14.04	□□□□□ -0.16
SSUH2-208	ENST00000455157	VGF	O15240	615 aa	Predicted RBP	14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	PRKAR2B	P31323	418 aa		14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	R3HCC1	Q9Y3T6	440 aa	Known RBP	14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	RNF17	Q9BXT8	1623 aa	Known RBP	14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	CFAP65	Q6ZU64	1925 aa	Known RBP	14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	SMC5	Q8IY18	1101 aa		14.03	□□□□□ -0.16
SSUH2-208	ENST00000455157	IQGAP1	P46940	1657 aa		14.02	□□□□□ -0.16
SSUH2-208	ENST00000455157	UQCRHL	A0A096LP55	91 aa		14.02	□□□□□ -0.16
SSUH2-208	ENST00000455157	UQCRH	P07919	91 aa		14.02	□□□□□ -0.16
SSUH2-208	ENST00000455157	TPRN	Q4KMQ1	711 aa		14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	FOXD4L5	Q5VV16	416 aa	Predicted RBP	14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	ZBTB40	Q9NUA8	1239 aa		14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	MSN	P26038	577 aa	Known RBP	14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	TRIM35	Q9UPQ4	493 aa		14.02	□□□□□ -0.17
SSUH2-208	ENST00000455157	KIF20A	O95235	890 aa		14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	NUCB1	Q02818	461 aa		14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	SKOR2	Q2VWA4	1001 aa	Predicted RBP	14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	CCDC94	Q9BW85	323 aa	Predicted RBP	14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	SSFA2	P28290	1259 aa		14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	CCDC173	Q0VFZ6	552 aa		14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	PPP1R9B	Q96SB3	815 aa		14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157	PHF23	Q9BUL5	403 aa	Predicted RBP	14.01	□□□□□ -0.17
SSUH2-208	ENST00000455157		K7ELQ4	463 aa	Predicted RBP	14	□□□□□ -0.17
SSUH2-208	ENST00000455157	DYNC1I1	O14576	645 aa		14	□□□□□ -0.17
SSUH2-208	ENST00000455157	MCTP1	Q6DN14	999 aa		14	□□□□□ -0.17
SSUH2-208	ENST00000455157	GAS2L3	Q86XJ1	694 aa		14	□□□□□ -0.17
SSUH2-208	ENST00000455157	ZNF830	Q96NB3	372 aa	Predicted RBP	14	□□□□□ -0.17
SSUH2-208	ENST00000455157	FANCA	O15360	1455 aa		14	□□□□□ -0.17
SSUH2-208	ENST00000455157	ZBTB7C	A1YPR0	619 aa		14	□□□□□ -0.17
SSUH2-208	ENST00000455157	NASP	P49321	788 aa	Predicted RBP	14	□□□□□ -0.17
SSUH2-208	ENST00000455157	ERCC6L2	Q5T890	1561 aa		13.99	□□□□□ -0.17
SSUH2-208	ENST00000455157	TBC1D9	Q6ZT07	1266 aa		13.99	□□□□□ -0.17
SSUH2-208	ENST00000455157	GTPBP4	Q9BZE4	634 aa	Known RBP	13.99	□□□□□ -0.17
SSUH2-208	ENST00000455157	PRAM1	Q96QH2	718 aa		13.99	□□□□□ -0.17
SSUH2-208	ENST00000455157	ADGRL1	O94910	1474 aa		13.98	□□□□□ -0.17
SSUH2-208	ENST00000455157	ABCC1	P33527	1531 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	BMP2KL	Q5H9B9	411 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	CAVIN1	Q6NZI2	390 aa	Known RBP	13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	ZNF518A	Q6AHZ1	1483 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	CD2BP2	O95400	341 aa	Known RBP	13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	CABP1	Q9NZU7	370 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	ANKRD36B	Q8N2N9	1353 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	RTEL1-TNFRSF6B	F6WH68	1400 aa		13.97	□□□□□ -0.17
SSUH2-208	ENST00000455157	FYB1	O15117	783 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	PTMS	P20962	102 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	GCC1	Q96CN9	775 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	CHD1	O14646	1710 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	SPHKAP	Q2M3C7	1700 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	MYOM1	P52179	1685 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	VGLL3	A8MV65	326 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	CDC45	O75419	566 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	LETM1	O95202	739 aa	Predicted RBP	13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	RBM25	P49756	843 aa	Known RBP	13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	CASC1	Q6TDU7	716 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	GAS2L2	Q8NHY3	880 aa		13.96	□□□□□ -0.17
SSUH2-208	ENST00000455157	NOL8	Q76FK4	1167 aa	Known RBP	13.96	□□□□□ -0.18
SSUH2-208	ENST00000455157	SOX12	O15370	315 aa		13.95	□□□□□ -0.18
SSUH2-208	ENST00000455157	RAB3GAP1	Q15042	981 aa		13.95	□□□□□ -0.18
SSUH2-208	ENST00000455157	TSPYL6	Q8N831	410 aa		13.95	□□□□□ -0.18
SSUH2-208	ENST00000455157	SNX21	Q969T3	373 aa		13.95	□□□□□ -0.18
SSUH2-208	ENST00000455157	SBNO2	Q9Y2G9	1366 aa		13.95	□□□□□ -0.18
SSUH2-208	ENST00000455157	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.94	□□□□□ -0.18
SSUH2-208	ENST00000455157	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.94	□□□□□ -0.18
SSUH2-208	ENST00000455157		A0A1W2PP64	1363 aa		13.94	□□□□□ -0.18
SSUH2-208	ENST00000455157	ZMYM3	Q14202	1370 aa		13.94	□□□□□ -0.18
SSUH2-208	ENST00000455157	ABCC11	Q96J66	1382 aa		13.94	□□□□□ -0.18
SSUH2-208	ENST00000455157	TWISTNB	Q3B726	338 aa	Predicted RBP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms