RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 HSP90AA1P07900 732 aaKnown RBP26.71■■□□□ 1.87
USP48-205ENST00000421625 RBM25P49756 843 aaKnown RBP26.71■■□□□ 1.87
USP48-205ENST00000421625 USP32Q8NFA0 1604 aa26.71■■□□□ 1.87
USP48-205ENST00000421625 CT47B1P0C2W7 299 aaPredicted RBP26.71■■□□□ 1.87
USP48-205ENST00000421625 NCBP3Q53F19 620 aaKnown RBP26.69■■□□□ 1.86
USP48-205ENST00000421625 SNX21Q969T3 373 aa26.69■■□□□ 1.86
USP48-205ENST00000421625 LNPKQ9C0E8 428 aa26.69■■□□□ 1.86
USP48-205ENST00000421625 SETBP1Q9Y6X0 1596 aa26.69■■□□□ 1.86
USP48-205ENST00000421625 ZBTB40Q9NUA8 1239 aa26.68■■□□□ 1.86
USP48-205ENST00000421625 TRIM35Q9UPQ4 493 aa26.67■■□□□ 1.86
USP48-205ENST00000421625 HSP90AB1P08238 724 aaKnown RBP26.67■■□□□ 1.86
USP48-205ENST00000421625 ISY1Q9ULR0 285 aaKnown RBP26.67■■□□□ 1.86
USP48-205ENST00000421625 HSP90AA2PQ14568 343 aaPredicted RBP26.66■■□□□ 1.86
USP48-205ENST00000421625 U2SURPO15042 1029 aaKnown RBP26.66■■□□□ 1.86
USP48-205ENST00000421625 TMPOP42166 694 aaKnown RBP26.66■■□□□ 1.86
USP48-205ENST00000421625 NUCB1Q02818 461 aa26.66■■□□□ 1.86
USP48-205ENST00000421625 FOXD4L1Q9NU39 408 aa26.66■■□□□ 1.86
USP48-205ENST00000421625 EFCAB6Q5THR3 1501 aa26.66■■□□□ 1.86
USP48-205ENST00000421625 FAM69CQ0P6D2 419 aa26.65■■□□□ 1.86
USP48-205ENST00000421625 PLEKHF1Q96S99 279 aa26.65■■□□□ 1.86
USP48-205ENST00000421625 RAB3GAP1Q15042 981 aa26.64■■□□□ 1.85
USP48-205ENST00000421625 C14orf93Q9H972 538 aaKnown RBP26.64■■□□□ 1.85
USP48-205ENST00000421625 CD2BP2O95400 341 aaKnown RBP26.63■■□□□ 1.85
USP48-205ENST00000421625 PPRC1Q5VV67 1664 aaKnown RBP26.63■■□□□ 1.85
USP48-205ENST00000421625 GLIPR1L2Q4G1C9 344 aa26.63■■□□□ 1.85
USP48-205ENST00000421625 ADGRB1O14514 1584 aa26.63■■□□□ 1.85
USP48-205ENST00000421625 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
USP48-205ENST00000421625 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
USP48-205ENST00000421625 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
USP48-205ENST00000421625 TRIM44Q96DX7 344 aaPredicted RBP26.62■■□□□ 1.85
USP48-205ENST00000421625 GBP4Q96PP9 640 aa26.62■■□□□ 1.85
USP48-205ENST00000421625 KIF2CQ99661 725 aa26.62■■□□□ 1.85
USP48-205ENST00000421625 ADGRB3O60242 1522 aa26.62■■□□□ 1.85
USP48-205ENST00000421625 CIZ1Q9ULV3 898 aaPredicted RBP26.61■■□□□ 1.85
USP48-205ENST00000421625 RRP9O43818 475 aaKnown RBP26.61■■□□□ 1.85
USP48-205ENST00000421625 CHD1LQ86WJ1 897 aa26.61■■□□□ 1.85
USP48-205ENST00000421625 ANKRD36BQ8N2N9 1353 aa26.6■■□□□ 1.85
USP48-205ENST00000421625 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
USP48-205ENST00000421625 MLH3Q9UHC1 1453 aa26.58■■□□□ 1.84
USP48-205ENST00000421625 NSD2O96028 1365 aa26.58■■□□□ 1.84
USP48-205ENST00000421625 ABCC11Q96J66 1382 aa26.57■■□□□ 1.84
USP48-205ENST00000421625 VSIG10Q8N0Z9 540 aa26.57■■□□□ 1.84
USP48-205ENST00000421625 CABP2Q9NPB3 220 aa26.57■■□□□ 1.84
USP48-205ENST00000421625 CFAP74Q9C0B2 1584 aa26.57■■□□□ 1.84
USP48-205ENST00000421625 FRMPD1Q5SYB0 1578 aa26.57■■□□□ 1.84
USP48-205ENST00000421625 RBM42Q9BTD8 480 aaKnown RBP26.57■■□□□ 1.84
USP48-205ENST00000421625 TULP4Q9NRJ4 1543 aa26.56■■□□□ 1.84
USP48-205ENST00000421625 HECW2Q9P2P5 1572 aa26.56■■□□□ 1.84
USP48-205ENST00000421625 KIF16BQ96L93 1317 aa26.55■■□□□ 1.84
USP48-205ENST00000421625 SKOR2Q2VWA4 1001 aaPredicted RBP26.55■■□□□ 1.84
USP48-205ENST00000421625 BMP2KLQ5H9B9 411 aa26.55■■□□□ 1.84
USP48-205ENST00000421625 PPLO60437 1756 aa26.55■■□□□ 1.84
USP48-205ENST00000421625 RIPK4P57078 832 aa26.55■■□□□ 1.84
USP48-205ENST00000421625 NEO1Q92859 1461 aa26.54■■□□□ 1.84
USP48-205ENST00000421625 EVC2Q86UK5 1308 aa26.54■■□□□ 1.84
USP48-205ENST00000421625 GGNBP2Q9H3C7 697 aa26.54■■□□□ 1.84
USP48-205ENST00000421625 IPO8O15397 1037 aaKnown RBP26.53■■□□□ 1.84
USP48-205ENST00000421625 SSFA2P28290 1259 aa26.53■■□□□ 1.84
USP48-205ENST00000421625 ANKRD45Q5TZF3 282 aa26.53■■□□□ 1.84
USP48-205ENST00000421625 IL16Q14005 1332 aa26.52■■□□□ 1.84
USP48-205ENST00000421625 K7ELQ4 463 aaPredicted RBP26.52■■□□□ 1.84
USP48-205ENST00000421625 NUTM2DQ5VT03 806 aaPredicted RBP26.52■■□□□ 1.84
USP48-205ENST00000421625 YEATS2Q9ULM3 1422 aa26.52■■□□□ 1.84
USP48-205ENST00000421625 COL3A1P02461 1466 aaPredicted RBP26.52■■□□□ 1.84
USP48-205ENST00000421625 SAFB2Q14151 953 aaKnown RBP eCLIP26.52■■□□□ 1.84
USP48-205ENST00000421625 C1orf115Q9H7X2 142 aa26.51■■□□□ 1.83
USP48-205ENST00000421625 TBC1D9Q6ZT07 1266 aa26.51■■□□□ 1.83
USP48-205ENST00000421625 GAS2L2Q8NHY3 880 aa26.51■■□□□ 1.83
USP48-205ENST00000421625 PPIP5K1Q6PFW1 1433 aa26.49■■□□□ 1.83
USP48-205ENST00000421625 A0A1W2PP64 1363 aa26.49■■□□□ 1.83
USP48-205ENST00000421625 ZMYND15Q9H091 742 aa26.48■■□□□ 1.83
USP48-205ENST00000421625 GLI2P10070 1586 aa26.48■■□□□ 1.83
USP48-205ENST00000421625 SENP3Q9H4L4 574 aaPredicted RBP26.48■■□□□ 1.83
USP48-205ENST00000421625 NPATQ14207 1427 aa26.48■■□□□ 1.83
USP48-205ENST00000421625 PTMSP20962 102 aa26.47■■□□□ 1.83
USP48-205ENST00000421625 NASPP49321 788 aaPredicted RBP26.46■■□□□ 1.83
USP48-205ENST00000421625 ALDH1L2Q3SY69 923 aa26.46■■□□□ 1.83
USP48-205ENST00000421625 PUS7Q96PZ0 661 aaKnown RBP26.45■■□□□ 1.83
USP48-205ENST00000421625 LMTK2Q8IWU2 1503 aa26.45■■□□□ 1.82
USP48-205ENST00000421625 ARHGEF28Q8N1W1 1705 aaKnown RBP26.45■■□□□ 1.82
USP48-205ENST00000421625 CCDC173Q0VFZ6 552 aa26.45■■□□□ 1.82
USP48-205ENST00000421625 TSPOAP1O95153 1857 aa26.45■■□□□ 1.82
USP48-205ENST00000421625 ZBTB7BO15156 539 aaPredicted RBP26.44■■□□□ 1.82
USP48-205ENST00000421625 MED14O60244 1454 aa26.44■■□□□ 1.82
USP48-205ENST00000421625 PPP1R9BQ96SB3 815 aa26.43■■□□□ 1.82
USP48-205ENST00000421625 DDX49Q9Y6V7 483 aaKnown RBP26.43■■□□□ 1.82
USP48-205ENST00000421625 GCC1Q96CN9 775 aa26.43■■□□□ 1.82
USP48-205ENST00000421625 AK9Q5TCS8 1911 aa26.42■■□□□ 1.82
USP48-205ENST00000421625 BAG4O95429 457 aaKnown RBP26.42■■□□□ 1.82
USP48-205ENST00000421625 TPM2P07951 284 aa26.42■■□□□ 1.82
USP48-205ENST00000421625 DIP2CQ9Y2E4 1556 aa26.41■■□□□ 1.82
USP48-205ENST00000421625 GOLGA6L22H0YM25 854 aa26.41■■□□□ 1.82
USP48-205ENST00000421625 KIAA1211Q6ZU35 1233 aa26.41■■□□□ 1.82
USP48-205ENST00000421625 SIRT2Q8IXJ6 389 aa26.41■■□□□ 1.82
USP48-205ENST00000421625 KLHL40Q2TBA0 621 aa26.4■■□□□ 1.82
USP48-205ENST00000421625 FYB1O15117 783 aa26.4■■□□□ 1.82
USP48-205ENST00000421625 DIAPH1O60610 1272 aaKnown RBP26.39■■□□□ 1.82
USP48-205ENST00000421625 SRPK2P78362 688 aaKnown RBP26.39■■□□□ 1.82
USP48-205ENST00000421625 CLEC17AQ6ZS10 378 aa26.38■■□□□ 1.81
USP48-205ENST00000421625 ZSCAN30Q86W11 494 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms