RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 ASXL1Q8IXJ9 1541 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 PIK3C2GO75747 1445 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 GOLGA6L19H0YKK7 550 aa16.82■□□□□ 0.28
CLTCL1-201ENST00000412649 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
CLTCL1-201ENST00000412649 GAS2L2Q8NHY3 880 aa16.81■□□□□ 0.28
CLTCL1-201ENST00000412649 SLC12A5Q9H2X9 1139 aa16.81■□□□□ 0.28
CLTCL1-201ENST00000412649 GNAI1P63096 354 aa16.81■□□□□ 0.28
CLTCL1-201ENST00000412649 CHMP3Q9Y3E7 222 aa16.81■□□□□ 0.28
CLTCL1-201ENST00000412649 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 NUCB1Q02818 461 aa16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 ZMYM3Q14202 1370 aa16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 ERC2O15083 957 aa16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 SMC3Q9UQE7 1217 aa16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 DNMT1P26358 1616 aaKnown RBP16.8■□□□□ 0.28
CLTCL1-201ENST00000412649 GTPBP4Q9BZE4 634 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-201ENST00000412649 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-201ENST00000412649 WDR33Q9C0J8 1336 aaKnown RBP16.79■□□□□ 0.28
CLTCL1-201ENST00000412649 ERBB4Q15303 1308 aa16.78■□□□□ 0.28
CLTCL1-201ENST00000412649 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
CLTCL1-201ENST00000412649 USP25Q9UHP3 1055 aa16.78■□□□□ 0.28
CLTCL1-201ENST00000412649 BCL11BQ9C0K0 894 aaPredicted RBP16.78■□□□□ 0.28
CLTCL1-201ENST00000412649 TEX35Q5T0J7 233 aa16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 ESF1Q9H501 851 aaKnown RBP16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 CGNQ9P2M7 1197 aaKnown RBP16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 CCDC112Q8NEF3 446 aa16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 RBSNQ9H1K0 784 aa16.77■□□□□ 0.28
CLTCL1-201ENST00000412649 NSD3Q9BZ95 1437 aa16.77■□□□□ 0.27
CLTCL1-201ENST00000412649 ZNF445P59923 1031 aa16.77■□□□□ 0.27
CLTCL1-201ENST00000412649 STK31Q9BXU1 1019 aa16.77■□□□□ 0.27
CLTCL1-201ENST00000412649 BECN2A8MW95 431 aa16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 FIBPO43427 364 aa16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 VPS37CA5D8V6 355 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 GGNBP2Q9H3C7 697 aa16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 BBXQ8WY36 941 aaPredicted RBP16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
CLTCL1-201ENST00000412649 KIAA0586Q9BVV6 1533 aa16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 NOLC1Q14978 699 aaKnown RBP eCLIP16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 DMRT2Q9Y5R5 561 aa16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 BCORL1Q5H9F3 1711 aa16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 TRIM5Q9C035 493 aa16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 ZNF428Q96B54 188 aa16.75■□□□□ 0.27
CLTCL1-201ENST00000412649 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 CCDC27Q2M243 656 aa16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 GPATCH8Q9UKJ3 1502 aaKnown RBP16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 TPM4P67936 248 aa16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.74■□□□□ 0.27
CLTCL1-201ENST00000412649 CCDC192P0DO97 292 aa16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 MAGI3Q5TCQ9 1506 aa16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 TRMT2AQ8IZ69 625 aaKnown RBP16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 ALDH1L2Q3SY69 923 aa16.73■□□□□ 0.27
CLTCL1-201ENST00000412649 CCDC141Q6ZP82 1450 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 ADCY5O95622 1261 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 NUP160Q12769 1436 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 PLEKHG5O94827 1062 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 UVSSAQ2YD98 709 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 CCDC183Q5T5S1 534 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 NUTM2DQ5VT03 806 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 GGT6Q6P531 493 aa16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 ZNF830Q96NB3 372 aaPredicted RBP16.72■□□□□ 0.27
CLTCL1-201ENST00000412649 TWISTNBQ3B726 338 aaPredicted RBP16.71■□□□□ 0.27
CLTCL1-201ENST00000412649 GPS2Q13227 327 aa16.71■□□□□ 0.27
CLTCL1-201ENST00000412649 KIF20AO95235 890 aa16.71■□□□□ 0.27
CLTCL1-201ENST00000412649 BICD2Q8TD16 824 aa16.71■□□□□ 0.27
CLTCL1-201ENST00000412649 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.71■□□□□ 0.26
CLTCL1-201ENST00000412649 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 PTPRGP23470 1445 aa16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 HMOX1P09601 288 aa16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 PRKAR2BP31323 418 aa16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 PDE4CQ08493 712 aa16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 ARGLU1Q9NWB6 273 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 POLR3AO14802 1390 aaPredicted RBP16.7■□□□□ 0.26
CLTCL1-201ENST00000412649 MYRIPQ8NFW9 859 aa16.69■□□□□ 0.26
CLTCL1-201ENST00000412649 ABCC11Q96J66 1382 aa16.69■□□□□ 0.26
CLTCL1-201ENST00000412649 ARHGEF11O15085 1522 aa16.69■□□□□ 0.26
CLTCL1-201ENST00000412649 ARHGAP5Q13017 1502 aa16.68■□□□□ 0.26
CLTCL1-201ENST00000412649 SAMD9Q5K651 1589 aa16.68■□□□□ 0.26
CLTCL1-201ENST00000412649 CABP2Q9NPB3 220 aa16.68■□□□□ 0.26
CLTCL1-201ENST00000412649 TTC12Q9H892 705 aaPredicted RBP16.68■□□□□ 0.26
CLTCL1-201ENST00000412649 ERICH4A6NGS2 130 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 TMEM132EQ6IEE7 984 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 GDPD2Q9HCC8 539 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 EIF2AK4Q9P2K8 1649 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 ITSN2Q9NZM3 1697 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 GPATCH3Q96I76 525 aa16.67■□□□□ 0.26
CLTCL1-201ENST00000412649 ZBTB40Q9NUA8 1239 aa16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 WDR62O43379 1518 aa16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 NPC1L1Q9UHC9 1359 aa16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 H3BQV1 296 aa16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 ZKSCAN1P17029 563 aaPredicted RBP16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
CLTCL1-201ENST00000412649 RUFY2Q8WXA3 655 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms