RNA–Protein interactions for RNA: ENST00000397661.6

NFIX-203, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 3,143 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-203ENST00000397661 ATF7IPQ6VMQ6 1270 aa27.65■■■□□ 2.02
NFIX-203ENST00000397661 TULP4Q9NRJ4 1543 aa27.65■■■□□ 2.02
NFIX-203ENST00000397661 NCKAP5LQ9HCH0 1330 aa27.65■■■□□ 2.02
NFIX-203ENST00000397661 NUTM2FA1L443 756 aa27.64■■■□□ 2.02
NFIX-203ENST00000397661 SHPRHQ149N8 1683 aa27.64■■■□□ 2.02
NFIX-203ENST00000397661 FRMPD1Q5SYB0 1578 aa27.63■■■□□ 2.01
NFIX-203ENST00000397661 NINLQ9Y2I6 1382 aa27.63■■■□□ 2.01
NFIX-203ENST00000397661 IQSEC2Q5JU85 1478 aa27.62■■■□□ 2.01
NFIX-203ENST00000397661 PHACTR3Q96KR7 559 aa27.62■■■□□ 2.01
NFIX-203ENST00000397661 YEATS2Q9ULM3 1422 aa27.62■■■□□ 2.01
NFIX-203ENST00000397661 SOX12O15370 315 aa27.62■■■□□ 2.01
NFIX-203ENST00000397661 TBC1D32Q96NH3 1257 aa27.61■■■□□ 2.01
NFIX-203ENST00000397661 ABCC3O15438 1527 aa27.61■■■□□ 2.01
NFIX-203ENST00000397661 EMILIN1Q9Y6C2 1016 aa27.61■■■□□ 2.01
NFIX-203ENST00000397661 GLI2P10070 1586 aa27.6■■■□□ 2.01
NFIX-203ENST00000397661 IFT172Q9UG01 1749 aa27.6■■■□□ 2.01
NFIX-203ENST00000397661 C22orf23Q9BZE7 217 aa27.58■■■□□ 2.01
NFIX-203ENST00000397661 DDX19BQ9UMR2 479 aa27.58■■■□□ 2.01
NFIX-203ENST00000397661 PLPPR3Q6T4P5 718 aa27.58■■■□□ 2.01
NFIX-203ENST00000397661 TSPYL6Q8N831 410 aa27.58■■■□□ 2.01
NFIX-203ENST00000397661 SLC52A1Q9NWF4 448 aa27.57■■■□□ 2
NFIX-203ENST00000397661 FOXD4L1Q9NU39 408 aa27.57■■■□□ 2
NFIX-203ENST00000397661 DCTN1Q14203 1278 aa27.56■■■□□ 2
NFIX-203ENST00000397661 RRS1Q15050 365 aaKnown RBP27.56■■■□□ 2
NFIX-203ENST00000397661 PPLO60437 1756 aa27.56■■■□□ 2
NFIX-203ENST00000397661 SETBP1Q9Y6X0 1596 aa27.56■■■□□ 2
NFIX-203ENST00000397661 LMTK2Q8IWU2 1503 aa27.56■■■□□ 2
NFIX-203ENST00000397661 NME9Q86XW9 330 aa27.55■■■□□ 2
NFIX-203ENST00000397661 MLH3Q9UHC1 1453 aa27.54■■■□□ 2
NFIX-203ENST00000397661 ABCC11Q96J66 1382 aa27.54■■■□□ 2
NFIX-203ENST00000397661 FAM83GA6ND36 823 aa27.54■■■□□ 2
NFIX-203ENST00000397661 ANKRD45Q5TZF3 282 aa27.54■■■□□ 2
NFIX-203ENST00000397661 POLKQ9UBT6 870 aa27.53■■■□□ 2
NFIX-203ENST00000397661 TXNDC2Q86VQ3 553 aa27.53■■■□□ 2
NFIX-203ENST00000397661 MYO3AQ8NEV4 1616 aa27.52■■■□□ 2
NFIX-203ENST00000397661 SIGLEC1Q9BZZ2 1709 aa27.51■■□□□ 1.99
NFIX-203ENST00000397661 CAMSAP1Q5T5Y3 1602 aa27.51■■□□□ 1.99
NFIX-203ENST00000397661 HECW2Q9P2P5 1572 aa27.5■■□□□ 1.99
NFIX-203ENST00000397661 APBB1O00213 710 aa27.5■■□□□ 1.99
NFIX-203ENST00000397661 FAM43AQ8N2R8 423 aa27.5■■□□□ 1.99
NFIX-203ENST00000397661 NSD2O96028 1365 aa27.49■■□□□ 1.99
NFIX-203ENST00000397661 IPO8O15397 1037 aaKnown RBP27.49■■□□□ 1.99
NFIX-203ENST00000397661 ZBTB40Q9NUA8 1239 aa27.49■■□□□ 1.99
NFIX-203ENST00000397661 NEURL4Q96JN8 1562 aa27.48■■□□□ 1.99
NFIX-203ENST00000397661 FAM69CQ0P6D2 419 aa27.48■■□□□ 1.99
NFIX-203ENST00000397661 YTHDC2Q9H6S0 1430 aaKnown RBP27.48■■□□□ 1.99
NFIX-203ENST00000397661 RRAGDQ9NQL2 400 aaPredicted RBP27.47■■□□□ 1.99
NFIX-203ENST00000397661 NEXMIFQ5QGS0 1516 aa27.47■■□□□ 1.99
NFIX-203ENST00000397661 ATAD2Q6PL18 1390 aa27.47■■□□□ 1.99
NFIX-203ENST00000397661 ANTXR1Q9H6X2 564 aa27.46■■□□□ 1.99
NFIX-203ENST00000397661 NLRP1Q9C000 1473 aa27.45■■□□□ 1.99
NFIX-203ENST00000397661 AAMPQ13685 434 aa27.45■■□□□ 1.98
NFIX-203ENST00000397661 RSPH6AQ9H0K4 717 aa27.45■■□□□ 1.98
NFIX-203ENST00000397661 FCHSD2O94868 740 aa27.43■■□□□ 1.98
NFIX-203ENST00000397661 HDAC1Q13547 482 aaPredicted RBP27.43■■□□□ 1.98
NFIX-203ENST00000397661 PUS7Q96PZ0 661 aaKnown RBP27.43■■□□□ 1.98
NFIX-203ENST00000397661 KRT24Q2M2I5 525 aa27.43■■□□□ 1.98
NFIX-203ENST00000397661 KIF16BQ96L93 1317 aa27.42■■□□□ 1.98
NFIX-203ENST00000397661 ARHGEF28Q8N1W1 1705 aaKnown RBP27.42■■□□□ 1.98
NFIX-203ENST00000397661 ZC3H13Q5T200 1668 aaKnown RBP27.41■■□□□ 1.98
NFIX-203ENST00000397661 CHD1LQ86WJ1 897 aa27.41■■□□□ 1.98
NFIX-203ENST00000397661 MBIPQ9NS73 344 aa27.4■■□□□ 1.98
NFIX-203ENST00000397661 HSCBQ8IWL3 235 aa27.4■■□□□ 1.98
NFIX-203ENST00000397661 SMC5Q8IY18 1101 aa27.4■■□□□ 1.98
NFIX-203ENST00000397661 C8orf58Q8NAV2 365 aa27.4■■□□□ 1.98
NFIX-203ENST00000397661 CT47B1P0C2W7 299 aaPredicted RBP27.39■■□□□ 1.98
NFIX-203ENST00000397661 PANK2Q9BZ23 570 aa27.39■■□□□ 1.98
NFIX-203ENST00000397661 PNNQ9H307 717 aaKnown RBP27.39■■□□□ 1.98
NFIX-203ENST00000397661 VAMP4O75379 141 aa27.39■■□□□ 1.97
NFIX-203ENST00000397661 HSP90AA1P07900 732 aaKnown RBP27.38■■□□□ 1.97
NFIX-203ENST00000397661 NFE2L2Q16236 605 aa27.38■■□□□ 1.97
NFIX-203ENST00000397661 UBE2Q2Q8WVN8 375 aa27.38■■□□□ 1.97
NFIX-203ENST00000397661 CD163L1Q9NR16 1453 aa27.37■■□□□ 1.97
NFIX-203ENST00000397661 RBM42Q9BTD8 480 aaKnown RBP27.37■■□□□ 1.97
NFIX-203ENST00000397661 PTPRMP28827 1452 aa27.37■■□□□ 1.97
NFIX-203ENST00000397661 PIK3C2BO00750 1634 aa27.37■■□□□ 1.97
NFIX-203ENST00000397661 TWISTNBQ3B726 338 aaPredicted RBP27.36■■□□□ 1.97
NFIX-203ENST00000397661 AEBP1Q8IUX7 1158 aa27.36■■□□□ 1.97
NFIX-203ENST00000397661 NUCB1Q02818 461 aa27.35■■□□□ 1.97
NFIX-203ENST00000397661 MYO5BQ9ULV0 1848 aa27.35■■□□□ 1.97
NFIX-203ENST00000397661 MIS18AQ9NYP9 233 aa27.34■■□□□ 1.97
NFIX-203ENST00000397661 ZBTB7BO15156 539 aaPredicted RBP27.33■■□□□ 1.97
NFIX-203ENST00000397661 MCM4P33991 863 aa27.33■■□□□ 1.97
NFIX-203ENST00000397661 MRPL50Q8N5N7 158 aaKnown RBP27.33■■□□□ 1.97
NFIX-203ENST00000397661 HSP90AB1P08238 724 aaKnown RBP27.32■■□□□ 1.96
NFIX-203ENST00000397661 XRCC6P12956 609 aaKnown RBP eCLIP27.32■■□□□ 1.96
NFIX-203ENST00000397661 COG3Q96JB2 828 aa27.32■■□□□ 1.96
NFIX-203ENST00000397661 DIP2CQ9Y2E4 1556 aa27.32■■□□□ 1.96
NFIX-203ENST00000397661 IL16Q14005 1332 aa27.32■■□□□ 1.96
NFIX-203ENST00000397661 NUDT16Q96DE0 195 aaKnown RBP27.32■■□□□ 1.96
NFIX-203ENST00000397661 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
NFIX-203ENST00000397661 ESF1Q9H501 851 aaKnown RBP27.31■■□□□ 1.96
NFIX-203ENST00000397661 MCM10Q7L590 875 aa27.31■■□□□ 1.96
NFIX-203ENST00000397661 L1TD1Q5T7N2 865 aaKnown RBP27.3■■□□□ 1.96
NFIX-203ENST00000397661 SIRT2Q8IXJ6 389 aa27.3■■□□□ 1.96
NFIX-203ENST00000397661 C16orf71Q8IYS4 520 aaPredicted RBP27.3■■□□□ 1.96
NFIX-203ENST00000397661 GOLGA6L3A6NEY3 463 aa27.3■■□□□ 1.96
NFIX-203ENST00000397661 IL13P35225 146 aa27.29■■□□□ 1.96
NFIX-203ENST00000397661 SULT6B1Q6IMI4 303 aa27.29■■□□□ 1.96
NFIX-203ENST00000397661 NAP1L5Q96NT1 182 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms