RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 ERC2O15083 957 aa14.79□□□□□ -0.04
DNMT1-202ENST00000359526 SMC3Q9UQE7 1217 aa14.79□□□□□ -0.04
DNMT1-202ENST00000359526 KDM5BQ9UGL1 1544 aa14.79□□□□□ -0.04
DNMT1-202ENST00000359526 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
DNMT1-202ENST00000359526 A2MP01023 1474 aa14.78□□□□□ -0.04
DNMT1-202ENST00000359526 TRIM29Q14134 588 aa14.78□□□□□ -0.04
DNMT1-202ENST00000359526 NOL10Q9BSC4 688 aaKnown RBP14.78□□□□□ -0.04
DNMT1-202ENST00000359526 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
DNMT1-202ENST00000359526 TNRQ92752 1358 aa14.78□□□□□ -0.04
DNMT1-202ENST00000359526 SETQ01105 290 aaPredicted RBP14.78□□□□□ -0.04
DNMT1-202ENST00000359526 ADAMTS8Q9UP79 889 aa14.78□□□□□ -0.04
DNMT1-202ENST00000359526 CREBRFQ8IUR6 639 aa14.77□□□□□ -0.04
DNMT1-202ENST00000359526 CCDC39Q9UFE4 941 aa14.77□□□□□ -0.04
DNMT1-202ENST00000359526 MCTP1Q6DN14 999 aa14.77□□□□□ -0.04
DNMT1-202ENST00000359526 SPG7Q9UQ90 795 aa14.77□□□□□ -0.04
DNMT1-202ENST00000359526 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.05
DNMT1-202ENST00000359526 LNPKQ9C0E8 428 aa14.77□□□□□ -0.05
DNMT1-202ENST00000359526 NEO1Q92859 1461 aa14.77□□□□□ -0.05
DNMT1-202ENST00000359526 LETM1O95202 739 aaPredicted RBP14.77□□□□□ -0.05
DNMT1-202ENST00000359526 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.053e-8■□□□□ 9.4
DNMT1-202ENST00000359526 NLRP6P59044 892 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 PANK1Q8TE04 598 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 UHRF1BP1LA0JNW5 1464 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 MCM2P49736 904 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 ANKRD20A12PQ8NF67 263 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 CEP89Q96ST8 783 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 EIF2AK4Q9P2K8 1649 aaKnown RBP14.76□□□□□ -0.05
DNMT1-202ENST00000359526 FKBP5Q13451 457 aaPredicted RBP14.76□□□□□ -0.05
DNMT1-202ENST00000359526 ZNF592Q92610 1267 aa14.76□□□□□ -0.05
DNMT1-202ENST00000359526 FOXD4L6Q3SYB3 417 aaPredicted RBP14.75□□□□□ -0.05
DNMT1-202ENST00000359526 SASS6Q6UVJ0 657 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 FOXD4L3Q6VB84 417 aaPredicted RBP14.75□□□□□ -0.05
DNMT1-202ENST00000359526 BICD2Q8TD16 824 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 NUP153P49790 1475 aaKnown RBP14.75□□□□□ -0.05
DNMT1-202ENST00000359526 R3HCC1Q9Y3T6 440 aaKnown RBP14.75□□□□□ -0.05
DNMT1-202ENST00000359526 PPP2R1AP30153 589 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 PRAM1Q96QH2 718 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 MARCH6O60337 910 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 MBD3O95983 291 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 TEX35Q5T0J7 233 aa14.75□□□□□ -0.05
DNMT1-202ENST00000359526 CPLX1O14810 134 aa14.74□□□□□ -0.05
DNMT1-202ENST00000359526 FRAT2O75474 233 aaPredicted RBP14.74□□□□□ -0.05
DNMT1-202ENST00000359526 CCDC47Q96A33 483 aaKnown RBP14.74□□□□□ -0.05
DNMT1-202ENST00000359526 ZNF428Q96B54 188 aa14.74□□□□□ -0.05
DNMT1-202ENST00000359526 RRP9O43818 475 aaKnown RBP14.74□□□□□ -0.05
DNMT1-202ENST00000359526 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.74□□□□□ -0.05
DNMT1-202ENST00000359526 ABTB2Q8N961 1025 aa14.73□□□□□ -0.05
DNMT1-202ENST00000359526 GCC1Q96CN9 775 aa14.73□□□□□ -0.05
DNMT1-202ENST00000359526 NASPP49321 788 aaPredicted RBP14.73□□□□□ -0.05
DNMT1-202ENST00000359526 CCAR2Q8N163 923 aaKnown RBP14.73□□□□□ -0.05
DNMT1-202ENST00000359526 NUTM2FA1L443 756 aa14.73□□□□□ -0.05
DNMT1-202ENST00000359526 IPO7O95373 1038 aaKnown RBP14.73□□□□□ -0.05
DNMT1-202ENST00000359526 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
DNMT1-202ENST00000359526 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
DNMT1-202ENST00000359526 TRAK2O60296 914 aa14.73□□□□□ -0.05
DNMT1-202ENST00000359526 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
DNMT1-202ENST00000359526 TRDNQ13061 729 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 CFAP70Q5T0N1 1121 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 TSPYL4Q9UJ04 414 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 CCDC73Q6ZRK6 1079 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 UBE2Q2Q8WVN8 375 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 PES1O00541 588 aaKnown RBP14.72□□□□□ -0.05
DNMT1-202ENST00000359526 RABEP1Q15276 862 aa14.72□□□□□ -0.05
DNMT1-202ENST00000359526 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
DNMT1-202ENST00000359526 VPS37CA5D8V6 355 aaPredicted RBP14.71□□□□□ -0.05
DNMT1-202ENST00000359526 PSMA5P28066 241 aa14.71□□□□□ -0.05
DNMT1-202ENST00000359526 SF3B2Q13435 895 aaKnown RBP14.71□□□□□ -0.05
DNMT1-202ENST00000359526 BACH2Q9BYV9 841 aa14.71□□□□□ -0.05
DNMT1-202ENST00000359526 ARGLU1Q9NWB6 273 aaPredicted RBP14.7□□□□□ -0.06
DNMT1-202ENST00000359526 GNAI3P08754 354 aa14.7□□□□□ -0.06
DNMT1-202ENST00000359526 SCAF11Q99590 1463 aaKnown RBP14.7□□□□□ -0.06
DNMT1-202ENST00000359526 NAT10Q9H0A0 1025 aaKnown RBP14.7□□□□□ -0.06
DNMT1-202ENST00000359526 NLRP2Q9NX02 1062 aa14.7□□□□□ -0.06
DNMT1-202ENST00000359526 CCDC30Q5VVM6 783 aa14.7□□□□□ -0.06
DNMT1-202ENST00000359526 PDZRN3Q9UPQ7 1066 aa14.7□□□□□ -0.06
DNMT1-202ENST00000359526 HOMER1Q86YM7 354 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 CDCA7LQ96GN5 454 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 CCDC61Q9Y6R9 512 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 MTHFSP49914 203 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 CCDC173Q0VFZ6 552 aa14.69□□□□□ -0.06
DNMT1-202ENST00000359526 WDR63Q8IWG1 891 aa14.68□□□□□ -0.06
DNMT1-202ENST00000359526 CNTROBQ8N137 903 aa14.68□□□□□ -0.06
DNMT1-202ENST00000359526 CWC22Q9HCG8 908 aaKnown RBP14.68□□□□□ -0.06
DNMT1-202ENST00000359526 CEP170Q5SW79 1584 aa14.68□□□□□ -0.06
DNMT1-202ENST00000359526 UBTFL1P0CB47 393 aaPredicted RBP14.68□□□□□ -0.06
DNMT1-202ENST00000359526 KIF6Q6ZMV9 814 aa14.67□□□□□ -0.06
DNMT1-202ENST00000359526 ACBD3Q9H3P7 528 aa14.67□□□□□ -0.06
DNMT1-202ENST00000359526 HIP1O00291 1037 aa14.67□□□□□ -0.06
DNMT1-202ENST00000359526 SAFBQ15424 915 aaKnown RBP eCLIP14.66□□□□□ -0.06
DNMT1-202ENST00000359526 GGNBP2Q9H3C7 697 aa14.66□□□□□ -0.06
DNMT1-202ENST00000359526 IFT57Q9NWB7 429 aa14.66□□□□□ -0.06
DNMT1-202ENST00000359526 ATP10AO60312 1499 aa14.66□□□□□ -0.06
DNMT1-202ENST00000359526 SAMD9Q5K651 1589 aa14.66□□□□□ -0.06
DNMT1-202ENST00000359526 PDCP20941 246 aa14.66□□□□□ -0.06
DNMT1-202ENST00000359526 RBM10P98175 930 aaKnown RBP14.65□□□□□ -0.06
DNMT1-202ENST00000359526 ABCC11Q96J66 1382 aa14.65□□□□□ -0.06
DNMT1-202ENST00000359526 ERICH2A1L162 156 aa14.65□□□□□ -0.06
DNMT1-202ENST00000359526 CCDC66A2RUB6 948 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms