RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ATF7IPQ6VMQ6 1270 aa25.14■■□□□ 1.62
CRLF3-201ENST00000324238 ANKRD36BQ8N2N9 1353 aa25.14■■□□□ 1.62
CRLF3-201ENST00000324238 CDK19Q9BWU1 502 aa25.13■■□□□ 1.61
CRLF3-201ENST00000324238 ABCC3O15438 1527 aa25.13■■□□□ 1.61
CRLF3-201ENST00000324238 IFT172Q9UG01 1749 aa25.12■■□□□ 1.61
CRLF3-201ENST00000324238 HMOX1P09601 288 aa25.12■■□□□ 1.61
CRLF3-201ENST00000324238 TULP4Q9NRJ4 1543 aa25.11■■□□□ 1.61
CRLF3-201ENST00000324238 FOXD4L1Q9NU39 408 aa25.11■■□□□ 1.61
CRLF3-201ENST00000324238 MLH3Q9UHC1 1453 aa25.09■■□□□ 1.61
CRLF3-201ENST00000324238 NCKAP5LQ9HCH0 1330 aa25.09■■□□□ 1.61
CRLF3-201ENST00000324238 FAM69CQ0P6D2 419 aa25.08■■□□□ 1.61
CRLF3-201ENST00000324238 PLPPR3Q6T4P5 718 aa25.08■■□□□ 1.61
CRLF3-201ENST00000324238 DDX19BQ9UMR2 479 aa25.08■■□□□ 1.61
CRLF3-201ENST00000324238 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.61
CRLF3-201ENST00000324238 TERF2IPQ9NYB0 399 aa25.08■■□□□ 1.6
CRLF3-201ENST00000324238 ZRANB1Q9UGI0 708 aa25.08■■□□□ 1.6
CRLF3-201ENST00000324238 PANK2Q9BZ23 570 aa25.07■■□□□ 1.6
CRLF3-201ENST00000324238 LMTK2Q8IWU2 1503 aa25.07■■□□□ 1.6
CRLF3-201ENST00000324238 NUTM2FA1L443 756 aa25.07■■□□□ 1.6
CRLF3-201ENST00000324238 DIAPH1O60610 1272 aaKnown RBP25.07■■□□□ 1.6
CRLF3-201ENST00000324238 VIRMAQ69YN4 1812 aaKnown RBP25.06■■□□□ 1.6
CRLF3-201ENST00000324238 PRKAR2BP31323 418 aa25.05■■□□□ 1.6
CRLF3-201ENST00000324238 PHACTR3Q96KR7 559 aa25.05■■□□□ 1.6
CRLF3-201ENST00000324238 SLC52A1Q9NWF4 448 aa25.05■■□□□ 1.6
CRLF3-201ENST00000324238 GLI2P10070 1586 aa25.05■■□□□ 1.6
CRLF3-201ENST00000324238 HECW2Q9P2P5 1572 aa25.05■■□□□ 1.6
CRLF3-201ENST00000324238 SETBP1Q9Y6X0 1596 aa25.04■■□□□ 1.6
CRLF3-201ENST00000324238 MCM4P33991 863 aa25.04■■□□□ 1.6
CRLF3-201ENST00000324238 ZBTB40Q9NUA8 1239 aa25.04■■□□□ 1.6
CRLF3-201ENST00000324238 SIGLEC1Q9BZZ2 1709 aa25.04■■□□□ 1.6
CRLF3-201ENST00000324238 AAMPQ13685 434 aa25.04■■□□□ 1.6
CRLF3-201ENST00000324238 TSPYL6Q8N831 410 aa25.03■■□□□ 1.6
CRLF3-201ENST00000324238 PPLO60437 1756 aa25.03■■□□□ 1.6
CRLF3-201ENST00000324238 HDGFL2Q7Z4V5 671 aaPredicted RBP25.03■■□□□ 1.6
CRLF3-201ENST00000324238 HDAC1Q13547 482 aaPredicted RBP25.02■■□□□ 1.6
CRLF3-201ENST00000324238 ANKRD45Q5TZF3 282 aa25.02■■□□□ 1.6
CRLF3-201ENST00000324238 RRAGDQ9NQL2 400 aaPredicted RBP25.02■■□□□ 1.6
CRLF3-201ENST00000324238 NEURL4Q96JN8 1562 aa25.01■■□□□ 1.59
CRLF3-201ENST00000324238 SOX12O15370 315 aa25■■□□□ 1.59
CRLF3-201ENST00000324238 XRCC6P12956 609 aaKnown RBP eCLIP25■■□□□ 1.59
CRLF3-201ENST00000324238 SMC5Q8IY18 1101 aa25■■□□□ 1.59
CRLF3-201ENST00000324238 EMILIN1Q9Y6C2 1016 aa24.99■■□□□ 1.59
CRLF3-201ENST00000324238 ABCC11Q96J66 1382 aa24.99■■□□□ 1.59
CRLF3-201ENST00000324238 TXNDC2Q86VQ3 553 aa24.99■■□□□ 1.59
CRLF3-201ENST00000324238 ZC3H13Q5T200 1668 aaKnown RBP24.99■■□□□ 1.59
CRLF3-201ENST00000324238 HSCBQ8IWL3 235 aa24.98■■□□□ 1.59
CRLF3-201ENST00000324238 RBM42Q9BTD8 480 aaKnown RBP24.97■■□□□ 1.59
CRLF3-201ENST00000324238 TRAK2O60296 914 aa24.97■■□□□ 1.59
CRLF3-201ENST00000324238 CAMSAP1Q5T5Y3 1602 aa24.97■■□□□ 1.59
CRLF3-201ENST00000324238 NEXMIFQ5QGS0 1516 aa24.97■■□□□ 1.59
CRLF3-201ENST00000324238 CHMP5Q9NZZ3 219 aa24.96■■□□□ 1.59
CRLF3-201ENST00000324238 PRKCSHP14314 528 aaPredicted RBP24.96■■□□□ 1.59
CRLF3-201ENST00000324238 RRS1Q15050 365 aaKnown RBP24.96■■□□□ 1.59
CRLF3-201ENST00000324238 CHD1LQ86WJ1 897 aa24.96■■□□□ 1.59
CRLF3-201ENST00000324238 NME9Q86XW9 330 aa24.96■■□□□ 1.59
CRLF3-201ENST00000324238 NSD2O96028 1365 aa24.95■■□□□ 1.59
CRLF3-201ENST00000324238 ATAD2Q6PL18 1390 aa24.95■■□□□ 1.58
CRLF3-201ENST00000324238 GOLGA6L3A6NEY3 463 aa24.94■■□□□ 1.58
CRLF3-201ENST00000324238 CD2BP2O95400 341 aaKnown RBP24.94■■□□□ 1.58
CRLF3-201ENST00000324238 NUCB1Q02818 461 aa24.94■■□□□ 1.58
CRLF3-201ENST00000324238 DCTN1Q14203 1278 aa24.94■■□□□ 1.58
CRLF3-201ENST00000324238 YTHDC2Q9H6S0 1430 aaKnown RBP24.94■■□□□ 1.58
CRLF3-201ENST00000324238 FAM83GA6ND36 823 aa24.94■■□□□ 1.58
CRLF3-201ENST00000324238 IPO8O15397 1037 aaKnown RBP24.94■■□□□ 1.58
CRLF3-201ENST00000324238 FAM43AQ8N2R8 423 aa24.94■■□□□ 1.58
CRLF3-201ENST00000324238 CT47B1P0C2W7 299 aaPredicted RBP24.93■■□□□ 1.58
CRLF3-201ENST00000324238 POLKQ9UBT6 870 aa24.93■■□□□ 1.58
CRLF3-201ENST00000324238 ARHGEF28Q8N1W1 1705 aaKnown RBP24.91■■□□□ 1.58
CRLF3-201ENST00000324238 KIF16BQ96L93 1317 aa24.9■■□□□ 1.58
CRLF3-201ENST00000324238 RSPH6AQ9H0K4 717 aa24.9■■□□□ 1.58
CRLF3-201ENST00000324238 DIP2CQ9Y2E4 1556 aa24.9■■□□□ 1.58
CRLF3-201ENST00000324238 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
CRLF3-201ENST00000324238 L1TD1Q5T7N2 865 aaKnown RBP24.9■■□□□ 1.58
CRLF3-201ENST00000324238 COL3A1P02461 1466 aaPredicted RBP24.89■■□□□ 1.58
CRLF3-201ENST00000324238 ADGRB2O60241 1585 aa24.89■■□□□ 1.58
CRLF3-201ENST00000324238 APBB1O00213 710 aa24.89■■□□□ 1.58
CRLF3-201ENST00000324238 PIK3C2BO00750 1634 aa24.89■■□□□ 1.57
CRLF3-201ENST00000324238 VAMP4O75379 141 aa24.88■■□□□ 1.57
CRLF3-201ENST00000324238 HSP90AA1P07900 732 aaKnown RBP24.88■■□□□ 1.57
CRLF3-201ENST00000324238 PUS7Q96PZ0 661 aaKnown RBP24.88■■□□□ 1.57
CRLF3-201ENST00000324238 ZBTB7BO15156 539 aaPredicted RBP24.88■■□□□ 1.57
CRLF3-201ENST00000324238 SIRT2Q8IXJ6 389 aa24.88■■□□□ 1.57
CRLF3-201ENST00000324238 ZNF692Q9BU19 519 aaPredicted RBP24.88■■□□□ 1.57
CRLF3-201ENST00000324238 CD163L1Q9NR16 1453 aa24.87■■□□□ 1.57
CRLF3-201ENST00000324238 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
CRLF3-201ENST00000324238 FCHSD2O94868 740 aa24.87■■□□□ 1.57
CRLF3-201ENST00000324238 C8orf58Q8NAV2 365 aa24.87■■□□□ 1.57
CRLF3-201ENST00000324238 KRT24Q2M2I5 525 aa24.86■■□□□ 1.57
CRLF3-201ENST00000324238 MBIPQ9NS73 344 aa24.86■■□□□ 1.57
CRLF3-201ENST00000324238 TNPO1Q92973 898 aaKnown RBP24.85■■□□□ 1.57
CRLF3-201ENST00000324238 PTPRMP28827 1452 aa24.85■■□□□ 1.57
CRLF3-201ENST00000324238 IL16Q14005 1332 aa24.85■■□□□ 1.57
CRLF3-201ENST00000324238 USP32Q8NFA0 1604 aa24.85■■□□□ 1.57
CRLF3-201ENST00000324238 MRPL50Q8N5N7 158 aaKnown RBP24.84■■□□□ 1.57
CRLF3-201ENST00000324238 PPIP5K1Q6PFW1 1433 aa24.84■■□□□ 1.57
CRLF3-201ENST00000324238 TBC1D9Q6ZT07 1266 aa24.84■■□□□ 1.57
CRLF3-201ENST00000324238 NEO1Q92859 1461 aa24.84■■□□□ 1.57
CRLF3-201ENST00000324238 C16orf71Q8IYS4 520 aaPredicted RBP24.83■■□□□ 1.57
CRLF3-201ENST00000324238 KIF2CQ99661 725 aa24.83■■□□□ 1.56
CRLF3-201ENST00000324238 ESF1Q9H501 851 aaKnown RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms