RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 HSCBQ8IWL3 235 aa17.52■□□□□ 0.4
EGR1-201ENST00000239938 TMPOP42166 694 aaKnown RBP17.52■□□□□ 0.4
EGR1-201ENST00000239938 GAS2L3Q86XJ1 694 aa17.52■□□□□ 0.4
EGR1-201ENST00000239938 TULP4Q9NRJ4 1543 aa17.52■□□□□ 0.39
EGR1-201ENST00000239938 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.39
EGR1-201ENST00000239938 VSIG10Q8N0Z9 540 aa17.51■□□□□ 0.39
EGR1-201ENST00000239938 TNPO1Q92973 898 aaKnown RBP17.51■□□□□ 0.39
EGR1-201ENST00000239938 KIF2CQ99661 725 aa17.51■□□□□ 0.39
EGR1-201ENST00000239938 DDX11L8A8MPP1 907 aa17.5■□□□□ 0.39
EGR1-201ENST00000239938 NUCB1Q02818 461 aa17.5■□□□□ 0.39
EGR1-201ENST00000239938 ANKRD36BQ8N2N9 1353 aa17.5■□□□□ 0.39
EGR1-201ENST00000239938 CD2BP2O95400 341 aaKnown RBP17.5■□□□□ 0.39
EGR1-201ENST00000239938 SNX21Q969T3 373 aa17.5■□□□□ 0.39
EGR1-201ENST00000239938 LNPKQ9C0E8 428 aa17.49■□□□□ 0.39
EGR1-201ENST00000239938 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
EGR1-201ENST00000239938 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
EGR1-201ENST00000239938 U2SURPO15042 1029 aaKnown RBP17.48■□□□□ 0.39
EGR1-201ENST00000239938 LMTK2Q8IWU2 1503 aa17.48■□□□□ 0.39
EGR1-201ENST00000239938 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
EGR1-201ENST00000239938 NSD2O96028 1365 aa17.47■□□□□ 0.39
EGR1-201ENST00000239938 NPATQ14207 1427 aa17.46■□□□□ 0.39
EGR1-201ENST00000239938 NUTM2DQ5VT03 806 aaPredicted RBP17.46■□□□□ 0.39
EGR1-201ENST00000239938 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
EGR1-201ENST00000239938 GLI2P10070 1586 aa17.46■□□□□ 0.39
EGR1-201ENST00000239938 PKNOX2Q96KN3 472 aa17.46■□□□□ 0.39
EGR1-201ENST00000239938 RAB3GAP1Q15042 981 aa17.45■□□□□ 0.38
EGR1-201ENST00000239938 CHD1LQ86WJ1 897 aa17.45■□□□□ 0.38
EGR1-201ENST00000239938 GGNBP2Q9H3C7 697 aa17.45■□□□□ 0.38
EGR1-201ENST00000239938 ESPNB1AK53 854 aa17.45■□□□□ 0.38
EGR1-201ENST00000239938 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
EGR1-201ENST00000239938 A0A1W2PP64 1363 aa17.44■□□□□ 0.38
EGR1-201ENST00000239938 ABCC11Q96J66 1382 aa17.44■□□□□ 0.38
EGR1-201ENST00000239938 RIPK4P57078 832 aa17.43■□□□□ 0.38
EGR1-201ENST00000239938 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
EGR1-201ENST00000239938 FOXD4L1Q9NU39 408 aa17.43■□□□□ 0.38
EGR1-201ENST00000239938 IL16Q14005 1332 aa17.43■□□□□ 0.38
EGR1-201ENST00000239938 SAFB2Q14151 953 aaKnown RBP eCLIP17.43■□□□□ 0.38
EGR1-201ENST00000239938 PUS7Q96PZ0 661 aaKnown RBP17.43■□□□□ 0.38
EGR1-201ENST00000239938 CFAP74Q9C0B2 1584 aa17.42■□□□□ 0.38
EGR1-201ENST00000239938 ISY1Q9ULR0 285 aaKnown RBP17.42■□□□□ 0.38
EGR1-201ENST00000239938 PPIP5K1Q6PFW1 1433 aa17.42■□□□□ 0.38
EGR1-201ENST00000239938 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
EGR1-201ENST00000239938 HSP90AB1P08238 724 aaKnown RBP17.41■□□□□ 0.38
EGR1-201ENST00000239938 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
EGR1-201ENST00000239938 CAMSAP1Q5T5Y3 1602 aa17.41■□□□□ 0.38
EGR1-201ENST00000239938 ZMYND15Q9H091 742 aa17.41■□□□□ 0.38
EGR1-201ENST00000239938 KIF16BQ96L93 1317 aa17.4■□□□□ 0.38
EGR1-201ENST00000239938 FYB1O15117 783 aa17.39■□□□□ 0.37
EGR1-201ENST00000239938 ZBTB7BO15156 539 aaPredicted RBP17.39■□□□□ 0.37
EGR1-201ENST00000239938 HSP90AA2PQ14568 343 aaPredicted RBP17.39■□□□□ 0.37
EGR1-201ENST00000239938 C1orf115Q9H7X2 142 aa17.39■□□□□ 0.37
EGR1-201ENST00000239938 MED14O60244 1454 aa17.39■□□□□ 0.37
EGR1-201ENST00000239938 TBC1D9Q6ZT07 1266 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 IPO8O15397 1037 aaKnown RBP17.38■□□□□ 0.37
EGR1-201ENST00000239938 ANKRD45Q5TZF3 282 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 ALDH1L2Q3SY69 923 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 GBP4Q96PP9 640 aa17.38■□□□□ 0.37
EGR1-201ENST00000239938 RPGRIP1LQ68CZ1 1315 aa17.37■□□□□ 0.37
EGR1-201ENST00000239938 HSP90AA1P07900 732 aaKnown RBP17.37■□□□□ 0.37
EGR1-201ENST00000239938 SSFA2P28290 1259 aa17.37■□□□□ 0.37
EGR1-201ENST00000239938 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
EGR1-201ENST00000239938 SENP3Q9H4L4 574 aaPredicted RBP17.37■□□□□ 0.37
EGR1-201ENST00000239938 FRMPD1Q5SYB0 1578 aa17.37■□□□□ 0.37
EGR1-201ENST00000239938 CD163L1Q9NR16 1453 aa17.37■□□□□ 0.37
EGR1-201ENST00000239938 GGT6Q6P531 493 aa17.36■□□□□ 0.37
EGR1-201ENST00000239938 K7ELQ4 463 aaPredicted RBP17.36■□□□□ 0.37
EGR1-201ENST00000239938 AK9Q5TCS8 1911 aa17.36■□□□□ 0.37
EGR1-201ENST00000239938 NEXMIFQ5QGS0 1516 aa17.35■□□□□ 0.37
EGR1-201ENST00000239938 PNPLA6Q8IY17 1366 aa17.35■□□□□ 0.37
EGR1-201ENST00000239938 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
EGR1-201ENST00000239938 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
EGR1-201ENST00000239938 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
EGR1-201ENST00000239938 FBLN1P23142 703 aa17.34■□□□□ 0.37
EGR1-201ENST00000239938 BRPF1P55201 1214 aaPredicted RBP17.34■□□□□ 0.37
EGR1-201ENST00000239938 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
EGR1-201ENST00000239938 RRP9O43818 475 aaKnown RBP17.33■□□□□ 0.37
EGR1-201ENST00000239938 SRPK2P78362 688 aaKnown RBP17.33■□□□□ 0.37
EGR1-201ENST00000239938 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
EGR1-201ENST00000239938 MRPL50Q8N5N7 158 aaKnown RBP17.33■□□□□ 0.36
EGR1-201ENST00000239938 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.36
EGR1-201ENST00000239938 STK26Q9P289 416 aa17.33■□□□□ 0.36
EGR1-201ENST00000239938 VAMP4O75379 141 aa17.32■□□□□ 0.36
EGR1-201ENST00000239938 GCC1Q96CN9 775 aa17.32■□□□□ 0.36
EGR1-201ENST00000239938 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
EGR1-201ENST00000239938 CLEC17AQ6ZS10 378 aa17.32■□□□□ 0.36
EGR1-201ENST00000239938 PIK3R4Q99570 1358 aa17.32■□□□□ 0.36
EGR1-201ENST00000239938 PIK3C2BO00750 1634 aa17.32■□□□□ 0.36
EGR1-201ENST00000239938 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
EGR1-201ENST00000239938 HECW2Q9P2P5 1572 aa17.31■□□□□ 0.36
EGR1-201ENST00000239938 PHACTR3Q96KR7 559 aa17.31■□□□□ 0.36
EGR1-201ENST00000239938 PPP1R9BQ96SB3 815 aa17.31■□□□□ 0.36
EGR1-201ENST00000239938 ABCC3O15438 1527 aa17.3■□□□□ 0.36
EGR1-201ENST00000239938 VGFO15240 615 aaPredicted RBP17.3■□□□□ 0.36
EGR1-201ENST00000239938 BAG4O95429 457 aaKnown RBP17.3■□□□□ 0.36
EGR1-201ENST00000239938 GLIPR1L2Q4G1C9 344 aa17.3■□□□□ 0.36
EGR1-201ENST00000239938 PTCH1Q13635 1447 aa17.29■□□□□ 0.36
EGR1-201ENST00000239938 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
EGR1-201ENST00000239938 FAM135BQ49AJ0 1406 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms