RNA–Protein interactions for RNA: ENST00000239938.4

EGR1-201, Transcript of early growth response 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGR1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR1-201ENST00000239938 NISCHQ9Y2I1 1504 aa27.71■■■□□ 2.03
EGR1-201ENST00000239938 SHROOM4Q9ULL8 1493 aa24.08■■□□□ 1.44
EGR1-201ENST00000239938 SUPT5HO00267 1087 aaKnown RBP23.79■■□□□ 1.4
EGR1-201ENST00000239938 ZCCHC6Q5VYS8 1495 aaKnown RBP23.53■■□□□ 1.36
EGR1-201ENST00000239938 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
EGR1-201ENST00000239938 HRCP23327 699 aa23.39■■□□□ 1.33
EGR1-201ENST00000239938 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
EGR1-201ENST00000239938 CCDC180Q9P1Z9 1646 aa23.25■■□□□ 1.31
EGR1-201ENST00000239938 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
EGR1-201ENST00000239938 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
EGR1-201ENST00000239938 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
EGR1-201ENST00000239938 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
EGR1-201ENST00000239938 LOC105371045A0A1W2PR82 267 aa22.76■■□□□ 1.23
EGR1-201ENST00000239938 TRIM26Q12899 539 aaPredicted RBP22.47■■□□□ 1.19
EGR1-201ENST00000239938 ABCC9O60706 1549 aa22.28■■□□□ 1.16
EGR1-201ENST00000239938 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
EGR1-201ENST00000239938 ZEB1P37275 1124 aaPredicted RBP22.07■■□□□ 1.12
EGR1-201ENST00000239938 TRIM41Q8WV44 630 aa22.04■■□□□ 1.12
EGR1-201ENST00000239938 RB1CC1Q8TDY2 1594 aa22.02■■□□□ 1.12
EGR1-201ENST00000239938 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
EGR1-201ENST00000239938 FAM9AQ8IZU1 332 aaPredicted RBP21.99■■□□□ 1.11
EGR1-201ENST00000239938 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
EGR1-201ENST00000239938 EHMT2Q96KQ7 1210 aa21.89■■□□□ 1.09
EGR1-201ENST00000239938 PELP1Q8IZL8 1130 aaKnown RBP21.74■■□□□ 1.07
EGR1-201ENST00000239938 CECR2Q9BXF3 1484 aa21.69■■□□□ 1.06
EGR1-201ENST00000239938 MROH2BQ7Z745 1585 aa21.63■■□□□ 1.05
EGR1-201ENST00000239938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.58■■□□□ 1.05
EGR1-201ENST00000239938 WIZO95785 1651 aa21.56■■□□□ 1.04
EGR1-201ENST00000239938 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
EGR1-201ENST00000239938 ACIN1Q9UKV3 1341 aaKnown RBP21.46■■□□□ 1.03
EGR1-201ENST00000239938 EIF4G1Q04637 1599 aaKnown RBP21.46■■□□□ 1.03
EGR1-201ENST00000239938 CCER1Q8TC90 406 aaPredicted RBP21.45■■□□□ 1.02
EGR1-201ENST00000239938 NACADO15069 1562 aa21.39■■□□□ 1.01
EGR1-201ENST00000239938 BAZ1AQ9NRL2 1556 aaPredicted RBP21.37■■□□□ 1.01
EGR1-201ENST00000239938 DIEXFQ68CQ4 756 aaKnown RBP21.31■■□□□ 1
EGR1-201ENST00000239938 TTBK1Q5TCY1 1321 aaPredicted RBP21.27■■□□□ 1
EGR1-201ENST00000239938 WRNQ14191 1432 aaPredicted RBP eCLIP21.26■□□□□ 0.99
EGR1-201ENST00000239938 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
EGR1-201ENST00000239938 CCDC88BA6NC98 1476 aa21.25■□□□□ 0.99
EGR1-201ENST00000239938 GTF3C3Q9Y5Q9 886 aa21.25■□□□□ 0.99
EGR1-201ENST00000239938 CEP162Q5TB80 1403 aa21.19■□□□□ 0.98
EGR1-201ENST00000239938 SOGA1O94964 1423 aa21.14■□□□□ 0.98
EGR1-201ENST00000239938 CENPBP07199 599 aaPredicted RBP21.13■□□□□ 0.97
EGR1-201ENST00000239938 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
EGR1-201ENST00000239938 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
EGR1-201ENST00000239938 SMARCA2P51531 1590 aa21.07■□□□□ 0.96
EGR1-201ENST00000239938 RUSC2Q8N2Y8 1516 aa21.06■□□□□ 0.96
EGR1-201ENST00000239938 ZNF316A6NFI3 1004 aaPredicted RBP21.02■□□□□ 0.95
EGR1-201ENST00000239938 SMARCA4P51532 1647 aa21.01■□□□□ 0.95
EGR1-201ENST00000239938 YTHDC1Q96MU7 727 aaKnown RBP21.01■□□□□ 0.95
EGR1-201ENST00000239938 CSRNP3Q8WYN3 585 aa20.98■□□□□ 0.95
EGR1-201ENST00000239938 UBTFP17480 764 aaKnown RBP20.93■□□□□ 0.94
EGR1-201ENST00000239938 EEA1Q15075 1411 aa20.91■□□□□ 0.94
EGR1-201ENST00000239938 MIER1Q8N108 512 aa20.87■□□□□ 0.93
EGR1-201ENST00000239938 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
EGR1-201ENST00000239938 UNC13AQ9UPW8 1703 aa20.82■□□□□ 0.92
EGR1-201ENST00000239938 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
EGR1-201ENST00000239938 SYNJ1O43426 1573 aa20.7■□□□□ 0.9
EGR1-201ENST00000239938 MYT1Q01538 1121 aa20.69■□□□□ 0.9
EGR1-201ENST00000239938 KIF21BO75037 1637 aa20.69■□□□□ 0.9
EGR1-201ENST00000239938 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
EGR1-201ENST00000239938 CLIP1P30622 1438 aa20.67■□□□□ 0.9
EGR1-201ENST00000239938 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
EGR1-201ENST00000239938 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.89
EGR1-201ENST00000239938 PEG3Q9GZU2 1588 aa20.55■□□□□ 0.88
EGR1-201ENST00000239938 BAZ1BQ9UIG0 1483 aaKnown RBP20.53■□□□□ 0.88
EGR1-201ENST00000239938 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
EGR1-201ENST00000239938 BICRAQ9NZM4 1560 aa20.51■□□□□ 0.87
EGR1-201ENST00000239938 RANGAP1P46060 587 aaPredicted RBP20.5■□□□□ 0.87
EGR1-201ENST00000239938 APLP2Q06481 763 aa20.46■□□□□ 0.87
EGR1-201ENST00000239938 DHX57Q6P158 1386 aaKnown RBP20.46■□□□□ 0.87
EGR1-201ENST00000239938 CLSPNQ9HAW4 1339 aa20.38■□□□□ 0.85
EGR1-201ENST00000239938 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
EGR1-201ENST00000239938 SUPT16HQ9Y5B9 1047 aaKnown RBP20.36■□□□□ 0.85
EGR1-201ENST00000239938 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
EGR1-201ENST00000239938 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
EGR1-201ENST00000239938 TOP2BQ02880 1626 aa20.33■□□□□ 0.85
EGR1-201ENST00000239938 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
EGR1-201ENST00000239938 ERICH3Q5RHP9 1530 aa20.26■□□□□ 0.83
EGR1-201ENST00000239938 RRBP1Q9P2E9 1410 aaKnown RBP20.25■□□□□ 0.83
EGR1-201ENST00000239938 BIVM-ERCC5R4GMW8 1640 aa20.24■□□□□ 0.83
EGR1-201ENST00000239938 CUX2O14529 1486 aa20.2■□□□□ 0.83
EGR1-201ENST00000239938 KCNH8Q96L42 1107 aa20.18■□□□□ 0.82
EGR1-201ENST00000239938 TSHZ2Q9NRE2 1034 aa20.17■□□□□ 0.82
EGR1-201ENST00000239938 CCNB3Q8WWL7 1395 aa20.12■□□□□ 0.81
EGR1-201ENST00000239938 ARHGAP35Q9NRY4 1499 aa20.09■□□□□ 0.81
EGR1-201ENST00000239938 CUX1P39880 1505 aa20.09■□□□□ 0.81
EGR1-201ENST00000239938 MAPKBP1O60336 1514 aa20.08■□□□□ 0.81
EGR1-201ENST00000239938 ITGAEP38570 1179 aa20.07■□□□□ 0.8
EGR1-201ENST00000239938 BCANQ96GW7 911 aa20.07■□□□□ 0.8
EGR1-201ENST00000239938 RAB3GAP2Q9H2M9 1393 aa20.04■□□□□ 0.8
EGR1-201ENST00000239938 KIF27Q86VH2 1401 aa20.01■□□□□ 0.79
EGR1-201ENST00000239938 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
EGR1-201ENST00000239938 ANP32EQ9BTT0 268 aa19.94■□□□□ 0.78
EGR1-201ENST00000239938 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
EGR1-201ENST00000239938 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
EGR1-201ENST00000239938 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
EGR1-201ENST00000239938 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
EGR1-201ENST00000239938 FKBP8Q14318 412 aa19.88■□□□□ 0.77
EGR1-201ENST00000239938 PHLDB1Q86UU1 1377 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms