RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 PTMSP20962 102 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 SLC12A5Q9H2X9 1139 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 IQGAP1P46940 1657 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 ARHGEF40Q8TER5 1519 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 CEP152O94986 1710 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 ERBB4Q15303 1308 aa12.1□□□□□ -0.47
TUBB1-201ENST00000217133 LNPKQ9C0E8 428 aa12.09□□□□□ -0.47
TUBB1-201ENST00000217133 CIZ1Q9ULV3 898 aaPredicted RBP12.09□□□□□ -0.47
TUBB1-201ENST00000217133 EXOSC9Q06265 439 aaKnown RBP12.09□□□□□ -0.47
TUBB1-201ENST00000217133 HDAC1Q13547 482 aaPredicted RBP12.09□□□□□ -0.47
TUBB1-201ENST00000217133 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
TUBB1-201ENST00000217133 TRIM27P14373 513 aa12.09□□□□□ -0.47
TUBB1-201ENST00000217133 CCDC27Q2M243 656 aa12.09□□□□□ -0.47
TUBB1-201ENST00000217133 DEPDC5O75140 1603 aa12.09□□□□□ -0.47
TUBB1-201ENST00000217133 U2SURPO15042 1029 aaKnown RBP12.08□□□□□ -0.48
TUBB1-201ENST00000217133 TPM2P07951 284 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 GAS2L3Q86XJ1 694 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 TRAK1Q9UPV9 953 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 ERVK-7P63135 1459 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 VWDEQ8N2E2 1590 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 ZNF692Q9BU19 519 aaPredicted RBP12.08□□□□□ -0.48
TUBB1-201ENST00000217133 PHF23Q9BUL5 403 aaPredicted RBP12.08□□□□□ -0.48
TUBB1-201ENST00000217133 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
TUBB1-201ENST00000217133 ATF7IPQ6VMQ6 1270 aa12.07□□□□□ -0.48
TUBB1-201ENST00000217133 SNX21Q969T3 373 aa12.07□□□□□ -0.48
TUBB1-201ENST00000217133 EFCAB6Q5THR3 1501 aa12.07□□□□□ -0.48
TUBB1-201ENST00000217133 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
TUBB1-201ENST00000217133 MSNP26038 577 aaKnown RBP12.07□□□□□ -0.48
TUBB1-201ENST00000217133 SMC5Q8IY18 1101 aa12.07□□□□□ -0.48
TUBB1-201ENST00000217133 SSH1Q8WYL5 1049 aa12.07□□□□□ -0.48
TUBB1-201ENST00000217133 PTPRTO14522 1441 aa12.06□□□□□ -0.48
TUBB1-201ENST00000217133 NASPP49321 788 aaPredicted RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 RBM25P49756 843 aaKnown RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 NOB1Q9ULX3 412 aaKnown RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 IPO8O15397 1037 aaKnown RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 NCLP19338 710 aaKnown RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 CCDC173Q0VFZ6 552 aa12.06□□□□□ -0.48
TUBB1-201ENST00000217133 KIAA1211Q6ZU35 1233 aa12.06□□□□□ -0.48
TUBB1-201ENST00000217133 TMEM57Q8N5G2 664 aa12.06□□□□□ -0.48
TUBB1-201ENST00000217133 DDX49Q9Y6V7 483 aaKnown RBP12.06□□□□□ -0.48
TUBB1-201ENST00000217133 MYOM1P52179 1685 aa12.05□□□□□ -0.48
TUBB1-201ENST00000217133 RAB3GAP1Q15042 981 aa12.05□□□□□ -0.48
TUBB1-201ENST00000217133 TET3O43151 1660 aa12.04□□□□□ -0.48
TUBB1-201ENST00000217133 ANKRD45Q5TZF3 282 aa12.04□□□□□ -0.48
TUBB1-201ENST00000217133 TMEM132EQ6IEE7 984 aa12.03□□□□□ -0.48
TUBB1-201ENST00000217133 CHD1LQ86WJ1 897 aa12.03□□□□□ -0.48
TUBB1-201ENST00000217133 AGLP35573 1532 aa12.03□□□□□ -0.48
TUBB1-201ENST00000217133 TRPM2O94759 1503 aa12.03□□□□□ -0.48
TUBB1-201ENST00000217133 K7ELQ4 463 aaPredicted RBP12.03□□□□□ -0.48
TUBB1-201ENST00000217133 ZSCAN30Q86W11 494 aa12.03□□□□□ -0.48
TUBB1-201ENST00000217133 SSFA2P28290 1259 aa12.02□□□□□ -0.48
TUBB1-201ENST00000217133 NUCB1Q02818 461 aa12.02□□□□□ -0.48
TUBB1-201ENST00000217133 CLTCL1P53675 1640 aa12.02□□□□□ -0.48
TUBB1-201ENST00000217133 DDIT3P35638 169 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 SLC52A1Q9NWF4 448 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 PPP6R1Q9UPN7 881 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 LMTK2Q8IWU2 1503 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 KIF16BQ96L93 1317 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 CLTCQ00610 1675 aaKnown RBP12.02□□□□□ -0.49
TUBB1-201ENST00000217133 PDCL3Q9H2J4 239 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 ZBTB40Q9NUA8 1239 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 NOS1P29475 1434 aa12.02□□□□□ -0.49
TUBB1-201ENST00000217133 IQSEC2Q5JU85 1478 aa12.01□□□□□ -0.49
TUBB1-201ENST00000217133 TMPOP42166 694 aaKnown RBP12.01□□□□□ -0.49
TUBB1-201ENST00000217133 NCOA3Q9Y6Q9 1424 aa12.01□□□□□ -0.49
TUBB1-201ENST00000217133 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
TUBB1-201ENST00000217133 BMP2KLQ5H9B9 411 aa12.01□□□□□ -0.49
TUBB1-201ENST00000217133 CAMSAP1Q5T5Y3 1602 aa12□□□□□ -0.49
TUBB1-201ENST00000217133 CALD1Q05682 793 aaKnown RBP12□□□□□ -0.49
TUBB1-201ENST00000217133 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
TUBB1-201ENST00000217133 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
TUBB1-201ENST00000217133 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
TUBB1-201ENST00000217133 RIPK4P57078 832 aa11.99□□□□□ -0.49
TUBB1-201ENST00000217133 STK26Q9P289 416 aa11.99□□□□□ -0.49
TUBB1-201ENST00000217133 KLHL40Q2TBA0 621 aa11.99□□□□□ -0.49
TUBB1-201ENST00000217133 NCBP3Q53F19 620 aaKnown RBP11.99□□□□□ -0.49
TUBB1-201ENST00000217133 GAS2L2Q8NHY3 880 aa11.99□□□□□ -0.49
TUBB1-201ENST00000217133 ARHGAP31Q2M1Z3 1444 aa11.99□□□□□ -0.49
TUBB1-201ENST00000217133 RBM10P98175 930 aaKnown RBP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 SAFB2Q14151 953 aaKnown RBP eCLIP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 MCTP1Q6DN14 999 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 PPP1R9BQ96SB3 815 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 SBNO2Q9Y2G9 1366 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 BAG4O95429 457 aaKnown RBP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 TBC1D9Q6ZT07 1266 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 TNRQ92752 1358 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 CHMP4BQ9H444 224 aaKnown RBP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 C1orf115Q9H7X2 142 aa11.98□□□□□ -0.49
TUBB1-201ENST00000217133 R3HCC1Q9Y3T6 440 aaKnown RBP11.98□□□□□ -0.49
TUBB1-201ENST00000217133 OFD1O75665 1012 aa11.97□□□□□ -0.49
TUBB1-201ENST00000217133 FAM13BQ9NYF5 915 aa11.97□□□□□ -0.49
TUBB1-201ENST00000217133 GCC1Q96CN9 775 aa11.96□□□□□ -0.49
TUBB1-201ENST00000217133 ABCC11Q96J66 1382 aa11.96□□□□□ -0.49
TUBB1-201ENST00000217133 KIF2CQ99661 725 aa11.96□□□□□ -0.49
TUBB1-201ENST00000217133 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
TUBB1-201ENST00000217133 EVC2Q86UK5 1308 aa11.96□□□□□ -0.5
TUBB1-201ENST00000217133 CDC45O75419 566 aa11.95□□□□□ -0.5
TUBB1-201ENST00000217133 NUCB2P80303 420 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms