RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Rwdd1Q9CQK7 243 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Spef2Q8C9J3 1734 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Gm20521D3Z5F7 333 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Kif3bQ61771 747 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Dhx30Q99PU8 1217 aaKnown RBP8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Lrrc7Q80TE7 1490 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Mdc1Q5PSV9 1707 aa8.1□□□□□ -1.11
Lig4-202ENSMUST00000170033 Srpk2O54781 681 aaKnown RBP8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 Usp19Q3UJD6 1360 aa8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 ChgaP26339 463 aaKnown RBP8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 Sh3bp5Q9Z131 463 aa8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 Fam135bQ9DAI6 1403 aa8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 Kdm2bQ6P1G2 1309 aa8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 PtmaP26350 111 aa8.09□□□□□ -1.11
Lig4-202ENSMUST00000170033 Arhgef28P97433 1693 aa8.08□□□□□ -1.12
Lig4-202ENSMUST00000170033 ErmnQ5EBJ4 281 aa8.08□□□□□ -1.12
Lig4-202ENSMUST00000170033 Q7TT23 1179 aa8.08□□□□□ -1.12
Lig4-202ENSMUST00000170033 Synj2Q9D2G5 1434 aa8.08□□□□□ -1.12
Lig4-202ENSMUST00000170033 E2f4Q8R0K9 410 aa8.08□□□□□ -1.12
Lig4-202ENSMUST00000170033 Usp40Q8BWR4 1235 aa8.07□□□□□ -1.12
Lig4-202ENSMUST00000170033 4933402E13RikQ9D4D2 429 aa8.07□□□□□ -1.12
Lig4-202ENSMUST00000170033 Ahdc1Q6PAL7 1594 aaKnown RBP8.07□□□□□ -1.12
Lig4-202ENSMUST00000170033 Riok3Q9DBU3 519 aaKnown RBP8.07□□□□□ -1.12
Lig4-202ENSMUST00000170033 Kif7B7ZNG0 1348 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 CenpjQ569L8 1344 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Rims2Q9EQZ7 1530 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 BcanQ61361 883 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Polr3glQ8R0C0 218 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Scaf11E9PZM7 1456 aaKnown RBP8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Uspl1Q3ULM6 1089 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Kdm4aQ8BW72 1064 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 RictorQ6QI06 1708 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 Kif1aP33173 1695 aa8.06□□□□□ -1.12
Lig4-202ENSMUST00000170033 IbtkQ6ZPR6 1352 aaKnown RBP8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 Znf521Q6KAS7 1311 aa8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 Psmd1Q3TXS7 953 aa8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 Uhrf1bp1B2KF50 1429 aa8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 Trim26Q99PN3 545 aa8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 EspnQ9ET47 871 aa8.05□□□□□ -1.12
Lig4-202ENSMUST00000170033 Qser1A2BIE1 1698 aa8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Puf60Q3UEB3 564 aaKnown RBP8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Rrp9Q91WM3 475 aaKnown RBP8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Dnajc14Q921R4 703 aa8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Itsn1Q9Z0R4 1714 aa8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Gemin5Q8BX17 1502 aaKnown RBP8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 Kiaa1107Q80TK0 1369 aa8.04□□□□□ -1.12
Lig4-202ENSMUST00000170033 IqubQ8CDK3 788 aa8.03□□□□□ -1.12
Lig4-202ENSMUST00000170033 P3h3Q8CG70 732 aa8.03□□□□□ -1.12
Lig4-202ENSMUST00000170033 Smc5Q8CG46 1101 aaKnown RBP8.03□□□□□ -1.12
Lig4-202ENSMUST00000170033 Golga2Q921M4 999 aa8.03□□□□□ -1.12
Lig4-202ENSMUST00000170033 PaskQ8CEE6 1383 aa8.03□□□□□ -1.12
Lig4-202ENSMUST00000170033 Kif13aQ9EQW7 1749 aa8.02□□□□□ -1.12
Lig4-202ENSMUST00000170033 Esx1O88933 382 aa8.02□□□□□ -1.13
Lig4-202ENSMUST00000170033 Ccdc30Q8BVF4 654 aa8.02□□□□□ -1.13
Lig4-202ENSMUST00000170033 Dip2aQ8BWT5 1523 aa8.02□□□□□ -1.13
Lig4-202ENSMUST00000170033 Cald1E9QA15 768 aaKnown RBP8.01□□□□□ -1.13
Lig4-202ENSMUST00000170033 Ppm1gQ61074 542 aa8.01□□□□□ -1.13
Lig4-202ENSMUST00000170033 Lmtk3Q5XJV6 1424 aa8.01□□□□□ -1.13
Lig4-202ENSMUST00000170033 Ttll13A4Q9F6 804 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Hsp90b1P08113 802 aaKnown RBP8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Nlrp6Q91WS2 869 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Hs6st3Q9QYK4 470 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Sall3Q62255 1320 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Kdm2aP59997 1161 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Trim58Q5NCC9 485 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Speer4f1Q9D5Q6 258 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Ptch1Q61115 1434 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Abca14E9Q8F8 1683 aa8□□□□□ -1.13
Lig4-202ENSMUST00000170033 Nwd1A6H603 1563 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Fan1Q69ZT1 1020 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Pabpn1Q8CCS6 302 aaKnown RBP7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Dcaf11Q91VU6 549 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Atl3Q91YH5 541 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Tnrc6bQ8BKI2 1810 aaKnown RBP7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 NktrP30415 1453 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 GsdmaQ9EST1 446 aa7.99□□□□□ -1.13
Lig4-202ENSMUST00000170033 Atp7bQ64446 1462 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 AU022751B1B0V2 589 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 Fam43aQ8BUP8 424 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 FanciQ8K368 1330 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 Fchsd2Q3USJ8 740 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 Cps1Q8C196 1500 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 PtprmP28828 1452 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 Prrc2bQ7TPM1 1486 aaKnown RBP7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 Znf526Q8BI66 675 aa7.98□□□□□ -1.13
Lig4-202ENSMUST00000170033 MycnP03966 462 aaKnown RBP7.97□□□□□ -1.13
Lig4-202ENSMUST00000170033 Mre11Q61216 706 aa7.97□□□□□ -1.13
Lig4-202ENSMUST00000170033 Kif20bQ80WE4 1774 aaKnown RBP7.97□□□□□ -1.13
Lig4-202ENSMUST00000170033 Arap3Q8R5G7 1538 aa7.97□□□□□ -1.13
Lig4-202ENSMUST00000170033 Stk24Q99KH8 431 aa7.97□□□□□ -1.13
Lig4-202ENSMUST00000170033 Dusp27Q148W8 1138 aa7.96□□□□□ -1.13
Lig4-202ENSMUST00000170033 Chd2E9PZM4 1827 aaKnown RBP7.96□□□□□ -1.13
Lig4-202ENSMUST00000170033 Ccdc171E9Q1U1 1324 aa7.96□□□□□ -1.13
Lig4-202ENSMUST00000170033 Speer4f2E9Q366 295 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 CrbnQ8C7D2 445 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 4930407I10RikD3Z5T8 1512 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 WdpcpQ8C456 722 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 Klf15Q9EPW2 415 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 Pik3c2bE9QAN8 1632 aa7.96□□□□□ -1.14
Lig4-202ENSMUST00000170033 NudcO35685 332 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms